RNA–Protein interactions for RNA: ENST00000595112.5

KHSRP-204, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 3

Gene KHSRP, Length 745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-204ENST00000595112 NISCHQ9Y2I1 1504 aa37.14■■■■□ 3.54
KHSRP-204ENST00000595112 CCDC180Q9P1Z9 1646 aa32.81■■■□□ 2.84
KHSRP-204ENST00000595112 ABCC9O60706 1549 aa31.16■■■□□ 2.58
KHSRP-204ENST00000595112 ZCCHC6Q5VYS8 1495 aaKnown RBP31.13■■■□□ 2.57
KHSRP-204ENST00000595112 DCAF1Q9Y4B6 1507 aa30.83■■■□□ 2.53
KHSRP-204ENST00000595112 MYO15BQ96JP2 1530 aa30.68■■■□□ 2.5
KHSRP-204ENST00000595112 NACADO15069 1562 aa30.59■■■□□ 2.49
KHSRP-204ENST00000595112 DCAF8L2P0C7V8 631 aa30.56■■■□□ 2.48
KHSRP-204ENST00000595112 RB1CC1Q8TDY2 1594 aa30.44■■■□□ 2.46
KHSRP-204ENST00000595112 SCRIBQ14160 1630 aa29.89■■■□□ 2.38
KHSRP-204ENST00000595112 UNC13AQ9UPW8 1703 aa29.85■■■□□ 2.37
KHSRP-204ENST00000595112 SHROOM4Q9ULL8 1493 aa29.7■■■□□ 2.35
KHSRP-204ENST00000595112 BICRAQ9NZM4 1560 aa29.44■■■□□ 2.3
KHSRP-204ENST00000595112 PABPN1Q86U42 306 aaKnown RBP eCLIP29.16■■■□□ 2.26
KHSRP-204ENST00000595112 BAZ1AQ9NRL2 1556 aaPredicted RBP28.78■■■□□ 2.2
KHSRP-204ENST00000595112 CECR2Q9BXF3 1484 aa28.77■■■□□ 2.2
KHSRP-204ENST00000595112 SMARCA4P51532 1647 aa28.7■■■□□ 2.19
KHSRP-204ENST00000595112 EIF4G1Q04637 1599 aaKnown RBP28.61■■■□□ 2.17
KHSRP-204ENST00000595112 MROH2BQ7Z745 1585 aa28.6■■■□□ 2.17
KHSRP-204ENST00000595112 RSF1Q96T23 1441 aaPredicted RBP28.53■■■□□ 2.16
KHSRP-204ENST00000595112 PEG3Q9GZU2 1588 aa28.42■■■□□ 2.14
KHSRP-204ENST00000595112 WIZO95785 1651 aa28.39■■■□□ 2.14
KHSRP-204ENST00000595112 SMARCA2P51531 1590 aa28.36■■■□□ 2.13
KHSRP-204ENST00000595112 SUPT5HO00267 1087 aaKnown RBP28.32■■■□□ 2.12
KHSRP-204ENST00000595112 CC2D2AQ9P2K1 1620 aa28.3■■■□□ 2.12
KHSRP-204ENST00000595112 ATAD2BQ9ULI0 1458 aa28.27■■■□□ 2.12
KHSRP-204ENST00000595112 HMGXB3Q12766 1538 aa28.16■■■□□ 2.1
KHSRP-204ENST00000595112 TOP2AP11388 1531 aaKnown RBP28.15■■■□□ 2.1
KHSRP-204ENST00000595112 NCAPD3P42695 1498 aa28.15■■■□□ 2.1
KHSRP-204ENST00000595112 BAZ1BQ9UIG0 1483 aaKnown RBP28.12■■■□□ 2.09
KHSRP-204ENST00000595112 DNAJC5BQ9UF47 199 aa27.76■■■□□ 2.03
KHSRP-204ENST00000595112 CCDC88BA6NC98 1476 aa27.74■■■□□ 2.03
KHSRP-204ENST00000595112 PRDM2Q13029 1718 aa27.47■■□□□ 1.99
KHSRP-204ENST00000595112 CFTRP13569 1480 aa27.38■■□□□ 1.97
KHSRP-204ENST00000595112 LAMC3Q9Y6N6 1575 aa27.36■■□□□ 1.97
KHSRP-204ENST00000595112 CADPSQ9ULU8 1353 aa27.35■■□□□ 1.97
KHSRP-204ENST00000595112 NESP48681 1621 aa27.19■■□□□ 1.94
KHSRP-204ENST00000595112 PDS5BQ9NTI5 1447 aa27.07■■□□□ 1.92
KHSRP-204ENST00000595112 FANCD2Q9BXW9 1451 aa27.06■■□□□ 1.92
KHSRP-204ENST00000595112 KIF21AQ7Z4S6 1674 aa27.04■■□□□ 1.92
KHSRP-204ENST00000595112 ABCC8Q09428 1581 aa26.99■■□□□ 1.91
KHSRP-204ENST00000595112 CEP164Q9UPV0 1460 aa26.98■■□□□ 1.91
KHSRP-204ENST00000595112 WRNQ14191 1432 aaPredicted RBP eCLIP26.91■■□□□ 1.9
KHSRP-204ENST00000595112 CHIC1Q5VXU3 224 aa26.91■■□□□ 1.9
KHSRP-204ENST00000595112 BIVM-ERCC5R4GMW8 1640 aa26.87■■□□□ 1.89
KHSRP-204ENST00000595112 SYNJ1O43426 1573 aa26.84■■□□□ 1.89
KHSRP-204ENST00000595112 TOP2BQ02880 1626 aa26.84■■□□□ 1.89
KHSRP-204ENST00000595112 ERCC6Q03468 1493 aa26.84■■□□□ 1.89
KHSRP-204ENST00000595112 DNMBPQ6XZF7 1577 aa26.81■■□□□ 1.88
KHSRP-204ENST00000595112 CUX1P39880 1505 aa26.8■■□□□ 1.88
KHSRP-204ENST00000595112 MRC2Q9UBG0 1479 aa26.77■■□□□ 1.88
KHSRP-204ENST00000595112 TRIM41Q8WV44 630 aa26.75■■□□□ 1.87
KHSRP-204ENST00000595112 URB2Q14146 1524 aaKnown RBP26.73■■□□□ 1.87
KHSRP-204ENST00000595112 TOPBP1Q92547 1522 aa26.73■■□□□ 1.87
KHSRP-204ENST00000595112 THOC2Q8NI27 1593 aaKnown RBP26.72■■□□□ 1.87
KHSRP-204ENST00000595112 WDR62O43379 1518 aa26.68■■□□□ 1.86
KHSRP-204ENST00000595112 FGD5Q6ZNL6 1462 aa26.59■■□□□ 1.85
KHSRP-204ENST00000595112 POLA1P09884 1462 aaPredicted RBP26.54■■□□□ 1.84
KHSRP-204ENST00000595112 WDR97A6NE52 1622 aa26.46■■□□□ 1.83
KHSRP-204ENST00000595112 SOGA1O94964 1423 aa26.41■■□□□ 1.82
KHSRP-204ENST00000595112 TARBP1Q13395 1621 aaKnown RBP26.41■■□□□ 1.82
KHSRP-204ENST00000595112 ABCA10Q8WWZ4 1543 aa26.39■■□□□ 1.82
KHSRP-204ENST00000595112 CUX2O14529 1486 aa26.38■■□□□ 1.81
KHSRP-204ENST00000595112 IFT140Q96RY7 1462 aa26.37■■□□□ 1.81
KHSRP-204ENST00000595112 EEA1Q15075 1411 aa26.37■■□□□ 1.81
KHSRP-204ENST00000595112 RAD54L2Q9Y4B4 1467 aa26.36■■□□□ 1.81
KHSRP-204ENST00000595112 KIF27Q86VH2 1401 aa26.31■■□□□ 1.8
KHSRP-204ENST00000595112 ABCA5Q8WWZ7 1642 aa26.27■■□□□ 1.8
KHSRP-204ENST00000595112 RUSC2Q8N2Y8 1516 aa26.23■■□□□ 1.79
KHSRP-204ENST00000595112 PBRM1Q86U86 1689 aa26.19■■□□□ 1.78
KHSRP-204ENST00000595112 EIF4G3O43432 1585 aaKnown RBP26.17■■□□□ 1.78
KHSRP-204ENST00000595112 GAPVD1Q14C86 1478 aa26.16■■□□□ 1.78
KHSRP-204ENST00000595112 FAM9AQ8IZU1 332 aaPredicted RBP26.13■■□□□ 1.77
KHSRP-204ENST00000595112 ERICH3Q5RHP9 1530 aa26.13■■□□□ 1.77
KHSRP-204ENST00000595112 TDRD9Q8NDG6 1382 aaKnown RBP26.12■■□□□ 1.77
KHSRP-204ENST00000595112 ZNF608Q9ULD9 1512 aaPredicted RBP26.12■■□□□ 1.77
KHSRP-204ENST00000595112 CUL7Q14999 1698 aa26.1■■□□□ 1.77
KHSRP-204ENST00000595112 CSRNP3Q8WYN3 585 aa26.1■■□□□ 1.77
KHSRP-204ENST00000595112 KIF21BO75037 1637 aa26.07■■□□□ 1.76
KHSRP-204ENST00000595112 AQRO60306 1485 aaKnown RBP eCLIP26.06■■□□□ 1.765e-9■■■■□ 24.9
KHSRP-204ENST00000595112 GRIN2BQ13224 1484 aa26.05■■□□□ 1.76
KHSRP-204ENST00000595112 IGF1RP08069 1367 aa26.03■■□□□ 1.76
KHSRP-204ENST00000595112 PRXQ9BXM0 1461 aa25.98■■□□□ 1.75
KHSRP-204ENST00000595112 ADAMTS12P58397 1594 aa25.95■■□□□ 1.75
KHSRP-204ENST00000595112 MAGI1Q96QZ7 1491 aaPredicted RBP25.93■■□□□ 1.74
KHSRP-204ENST00000595112 CARMIL1Q5VZK9 1371 aa25.93■■□□□ 1.74
KHSRP-204ENST00000595112 GOLGA3Q08378 1498 aa25.92■■□□□ 1.74
KHSRP-204ENST00000595112 RAPGEF2Q9Y4G8 1499 aa25.91■■□□□ 1.74
KHSRP-204ENST00000595112 SNAPC4Q5SXM2 1469 aa25.9■■□□□ 1.74
KHSRP-204ENST00000595112 FHAD1B1AJZ9 1412 aa25.88■■□□□ 1.73
KHSRP-204ENST00000595112 SYNJ2O15056 1496 aa25.8■■□□□ 1.72
KHSRP-204ENST00000595112 CTTNBP2Q8WZ74 1663 aa25.77■■□□□ 1.72
KHSRP-204ENST00000595112 LOC105371045A0A1W2PR82 267 aa25.75■■□□□ 1.71
KHSRP-204ENST00000595112 CHD1O14646 1710 aa25.74■■□□□ 1.71
KHSRP-204ENST00000595112 GRIN2AQ12879 1464 aa25.72■■□□□ 1.71
KHSRP-204ENST00000595112 TNIKQ9UKE5 1360 aa25.7■■□□□ 1.71
KHSRP-204ENST00000595112 UBTFP17480 764 aaKnown RBP25.69■■□□□ 1.7
KHSRP-204ENST00000595112 EHMT2Q96KQ7 1210 aa25.69■■□□□ 1.7
KHSRP-204ENST00000595112 CHMP7Q8WUX9 453 aaPredicted RBP25.65■■□□□ 1.7
KHSRP-204ENST00000595112 CEP170Q5SW79 1584 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms