RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 NISCHQ9Y2I1 1504 aa29.72■■■□□ 2.35
TRAPPC12-217ENST00000473348 CCDC180Q9P1Z9 1646 aa26.35■■□□□ 1.81
TRAPPC12-217ENST00000473348 ABCC9O60706 1549 aa25.18■■□□□ 1.62
TRAPPC12-217ENST00000473348 ZCCHC6Q5VYS8 1495 aaKnown RBP24.89■■□□□ 1.57
TRAPPC12-217ENST00000473348 DCAF1Q9Y4B6 1507 aa24.62■■□□□ 1.53
TRAPPC12-217ENST00000473348 NACADO15069 1562 aa24.55■■□□□ 1.52
TRAPPC12-217ENST00000473348 MYO15BQ96JP2 1530 aa24.52■■□□□ 1.52
TRAPPC12-217ENST00000473348 DCAF8L2P0C7V8 631 aa24.52■■□□□ 1.52
TRAPPC12-217ENST00000473348 RB1CC1Q8TDY2 1594 aa24.49■■□□□ 1.51
TRAPPC12-217ENST00000473348 UNC13AQ9UPW8 1703 aa24.12■■□□□ 1.45
TRAPPC12-217ENST00000473348 SCRIBQ14160 1630 aa24.04■■□□□ 1.44
TRAPPC12-217ENST00000473348 SHROOM4Q9ULL8 1493 aa23.75■■□□□ 1.39
TRAPPC12-217ENST00000473348 BICRAQ9NZM4 1560 aa23.74■■□□□ 1.39
TRAPPC12-217ENST00000473348 PABPN1Q86U42 306 aaKnown RBP eCLIP23.52■■□□□ 1.36
TRAPPC12-217ENST00000473348 CECR2Q9BXF3 1484 aa23.08■■□□□ 1.29
TRAPPC12-217ENST00000473348 EIF4G1Q04637 1599 aaKnown RBP23.06■■□□□ 1.28
TRAPPC12-217ENST00000473348 SMARCA4P51532 1647 aa23.04■■□□□ 1.28
TRAPPC12-217ENST00000473348 BAZ1AQ9NRL2 1556 aaPredicted RBP23.03■■□□□ 1.28
TRAPPC12-217ENST00000473348 MROH2BQ7Z745 1585 aa22.93■■□□□ 1.26
TRAPPC12-217ENST00000473348 CC2D2AQ9P2K1 1620 aa22.86■■□□□ 1.25
TRAPPC12-217ENST00000473348 WIZO95785 1651 aa22.78■■□□□ 1.24
TRAPPC12-217ENST00000473348 RSF1Q96T23 1441 aaPredicted RBP22.78■■□□□ 1.24
TRAPPC12-217ENST00000473348 PEG3Q9GZU2 1588 aa22.76■■□□□ 1.23
TRAPPC12-217ENST00000473348 SMARCA2P51531 1590 aa22.73■■□□□ 1.23
TRAPPC12-217ENST00000473348 ATAD2BQ9ULI0 1458 aa22.68■■□□□ 1.22
TRAPPC12-217ENST00000473348 HMGXB3Q12766 1538 aa22.6■■□□□ 1.21
TRAPPC12-217ENST00000473348 NCAPD3P42695 1498 aa22.57■■□□□ 1.2
TRAPPC12-217ENST00000473348 BAZ1BQ9UIG0 1483 aaKnown RBP22.56■■□□□ 1.2
TRAPPC12-217ENST00000473348 DNAJC5BQ9UF47 199 aa22.55■■□□□ 1.2
TRAPPC12-217ENST00000473348 SUPT5HO00267 1087 aaKnown RBP22.53■■□□□ 1.2
TRAPPC12-217ENST00000473348 TOP2AP11388 1531 aaKnown RBP22.52■■□□□ 1.2
TRAPPC12-217ENST00000473348 CCDC88BA6NC98 1476 aa22.19■■□□□ 1.14
TRAPPC12-217ENST00000473348 PRDM2Q13029 1718 aa22.08■■□□□ 1.12
TRAPPC12-217ENST00000473348 LAMC3Q9Y6N6 1575 aa21.99■■□□□ 1.11
TRAPPC12-217ENST00000473348 NESP48681 1621 aa21.95■■□□□ 1.1
TRAPPC12-217ENST00000473348 CFTRP13569 1480 aa21.93■■□□□ 1.1
TRAPPC12-217ENST00000473348 CADPSQ9ULU8 1353 aa21.92■■□□□ 1.1
TRAPPC12-217ENST00000473348 KIF21AQ7Z4S6 1674 aa21.85■■□□□ 1.09
TRAPPC12-217ENST00000473348 PDS5BQ9NTI5 1447 aa21.74■■□□□ 1.07
TRAPPC12-217ENST00000473348 FANCD2Q9BXW9 1451 aa21.73■■□□□ 1.07
TRAPPC12-217ENST00000473348 CEP164Q9UPV0 1460 aa21.68■■□□□ 1.06
TRAPPC12-217ENST00000473348 ERCC6Q03468 1493 aa21.66■■□□□ 1.06
TRAPPC12-217ENST00000473348 ABCC8Q09428 1581 aa21.61■■□□□ 1.05
TRAPPC12-217ENST00000473348 THOC2Q8NI27 1593 aaKnown RBP21.59■■□□□ 1.05
TRAPPC12-217ENST00000473348 MRC2Q9UBG0 1479 aa21.54■■□□□ 1.04
TRAPPC12-217ENST00000473348 DNMBPQ6XZF7 1577 aa21.52■■□□□ 1.04
TRAPPC12-217ENST00000473348 BIVM-ERCC5R4GMW8 1640 aa21.51■■□□□ 1.03
TRAPPC12-217ENST00000473348 URB2Q14146 1524 aaKnown RBP21.5■■□□□ 1.03
TRAPPC12-217ENST00000473348 SYNJ1O43426 1573 aa21.5■■□□□ 1.03
TRAPPC12-217ENST00000473348 CUX1P39880 1505 aa21.5■■□□□ 1.03
TRAPPC12-217ENST00000473348 WRNQ14191 1432 aaPredicted RBP eCLIP21.49■■□□□ 1.03
TRAPPC12-217ENST00000473348 WDR62O43379 1518 aa21.49■■□□□ 1.03
TRAPPC12-217ENST00000473348 TOP2BQ02880 1626 aa21.47■■□□□ 1.03
TRAPPC12-217ENST00000473348 TOPBP1Q92547 1522 aa21.46■■□□□ 1.03
TRAPPC12-217ENST00000473348 FGD5Q6ZNL6 1462 aa21.33■■□□□ 1.01
TRAPPC12-217ENST00000473348 CHIC1Q5VXU3 224 aa21.3■■□□□ 1
TRAPPC12-217ENST00000473348 POLA1P09884 1462 aaPredicted RBP21.3■■□□□ 1
TRAPPC12-217ENST00000473348 WDR97A6NE52 1622 aa21.27■■□□□ 1
TRAPPC12-217ENST00000473348 TRIM41Q8WV44 630 aa21.25■□□□□ 0.99
TRAPPC12-217ENST00000473348 CUX2O14529 1486 aa21.25■□□□□ 0.99
TRAPPC12-217ENST00000473348 TARBP1Q13395 1621 aaKnown RBP21.24■□□□□ 0.99
TRAPPC12-217ENST00000473348 RAD54L2Q9Y4B4 1467 aa21.19■□□□□ 0.98
TRAPPC12-217ENST00000473348 SOGA1O94964 1423 aa21.17■□□□□ 0.98
TRAPPC12-217ENST00000473348 IFT140Q96RY7 1462 aa21.17■□□□□ 0.98
TRAPPC12-217ENST00000473348 ABCA10Q8WWZ4 1543 aa21.13■□□□□ 0.97
TRAPPC12-217ENST00000473348 ABCA5Q8WWZ7 1642 aa21.09■□□□□ 0.97
TRAPPC12-217ENST00000473348 EIF4G3O43432 1585 aaKnown RBP21.09■□□□□ 0.97
TRAPPC12-217ENST00000473348 PBRM1Q86U86 1689 aa21.08■□□□□ 0.96
TRAPPC12-217ENST00000473348 ZNF608Q9ULD9 1512 aaPredicted RBP21.05■□□□□ 0.96
TRAPPC12-217ENST00000473348 KIF27Q86VH2 1401 aa20.99■□□□□ 0.95
TRAPPC12-217ENST00000473348 RUSC2Q8N2Y8 1516 aa20.98■□□□□ 0.95
TRAPPC12-217ENST00000473348 TDRD9Q8NDG6 1382 aaKnown RBP20.97■□□□□ 0.95
TRAPPC12-217ENST00000473348 GAPVD1Q14C86 1478 aa20.97■□□□□ 0.95
TRAPPC12-217ENST00000473348 AQRO60306 1485 aaKnown RBP eCLIP20.96■□□□□ 0.95
TRAPPC12-217ENST00000473348 EEA1Q15075 1411 aa20.92■□□□□ 0.94
TRAPPC12-217ENST00000473348 ERICH3Q5RHP9 1530 aa20.91■□□□□ 0.94
TRAPPC12-217ENST00000473348 CUL7Q14999 1698 aa20.89■□□□□ 0.94
TRAPPC12-217ENST00000473348 GRIN2BQ13224 1484 aa20.89■□□□□ 0.94
TRAPPC12-217ENST00000473348 ADAMTS12P58397 1594 aa20.85■□□□□ 0.93
TRAPPC12-217ENST00000473348 SNAPC4Q5SXM2 1469 aa20.83■□□□□ 0.93
TRAPPC12-217ENST00000473348 FAM9AQ8IZU1 332 aaPredicted RBP20.82■□□□□ 0.92
TRAPPC12-217ENST00000473348 CHD1O14646 1710 aa20.81■□□□□ 0.92
TRAPPC12-217ENST00000473348 MAGI1Q96QZ7 1491 aaPredicted RBP20.81■□□□□ 0.92
TRAPPC12-217ENST00000473348 IGF1RP08069 1367 aa20.79■□□□□ 0.92
TRAPPC12-217ENST00000473348 KIF21BO75037 1637 aa20.77■□□□□ 0.92
TRAPPC12-217ENST00000473348 CSRNP3Q8WYN3 585 aa20.74■□□□□ 0.91
TRAPPC12-217ENST00000473348 FHAD1B1AJZ9 1412 aa20.72■□□□□ 0.91
TRAPPC12-217ENST00000473348 SYNJ2O15056 1496 aa20.71■□□□□ 0.91
TRAPPC12-217ENST00000473348 PRXQ9BXM0 1461 aa20.71■□□□□ 0.91
TRAPPC12-217ENST00000473348 CARMIL1Q5VZK9 1371 aa20.7■□□□□ 0.9
TRAPPC12-217ENST00000473348 RAPGEF2Q9Y4G8 1499 aa20.68■□□□□ 0.9
TRAPPC12-217ENST00000473348 GRIN2AQ12879 1464 aa20.66■□□□□ 0.9
TRAPPC12-217ENST00000473348 CTTNBP2Q8WZ74 1663 aa20.65■□□□□ 0.9
TRAPPC12-217ENST00000473348 GOLGA3Q08378 1498 aa20.62■□□□□ 0.89
TRAPPC12-217ENST00000473348 CHMP7Q8WUX9 453 aaPredicted RBP20.58■□□□□ 0.89
TRAPPC12-217ENST00000473348 CEP170Q5SW79 1584 aa20.58■□□□□ 0.88
TRAPPC12-217ENST00000473348 FBLN2P98095 1184 aa20.57■□□□□ 0.88
TRAPPC12-217ENST00000473348 EHMT2Q96KQ7 1210 aa20.52■□□□□ 0.88
TRAPPC12-217ENST00000473348 NUP160Q12769 1436 aa20.52■□□□□ 0.87
TRAPPC12-217ENST00000473348 IQGAP2Q13576 1575 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms