RNA–Protein interactions for RNA: ENST00000601665.5

NUP62-223, Transcript of nucleoporin 62, humanhuman

TSL 5

Gene NUP62, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP62-223ENST00000601665 NISCHQ9Y2I1 1504 aa31.22■■■□□ 2.59
NUP62-223ENST00000601665 ABCC9O60706 1549 aa28.79■■■□□ 2.2
NUP62-223ENST00000601665 CCDC180Q9P1Z9 1646 aa28.22■■■□□ 2.11
NUP62-223ENST00000601665 DNAJC5BQ9UF47 199 aa27.38■■□□□ 1.97
NUP62-223ENST00000601665 RB1CC1Q8TDY2 1594 aa27.16■■□□□ 1.94
NUP62-223ENST00000601665 NACADO15069 1562 aa26.83■■□□□ 1.89
NUP62-223ENST00000601665 DCAF8L2P0C7V8 631 aa26.76■■□□□ 1.87
NUP62-223ENST00000601665 PABPN1Q86U42 306 aaKnown RBP eCLIP26.75■■□□□ 1.87
NUP62-223ENST00000601665 UNC13AQ9UPW8 1703 aa26.43■■□□□ 1.82
NUP62-223ENST00000601665 BICRAQ9NZM4 1560 aa26.29■■□□□ 1.8
NUP62-223ENST00000601665 MYO15BQ96JP2 1530 aa26.24■■□□□ 1.79
NUP62-223ENST00000601665 CECR2Q9BXF3 1484 aa25.99■■□□□ 1.75
NUP62-223ENST00000601665 SHROOM4Q9ULL8 1493 aa25.96■■□□□ 1.75
NUP62-223ENST00000601665 CC2D2AQ9P2K1 1620 aa25.93■■□□□ 1.74
NUP62-223ENST00000601665 EIF4G1Q04637 1599 aaKnown RBP25.75■■□□□ 1.71
NUP62-223ENST00000601665 ZCCHC6Q5VYS8 1495 aaKnown RBP25.75■■□□□ 1.71
NUP62-223ENST00000601665 SCRIBQ14160 1630 aa25.74■■□□□ 1.71
NUP62-223ENST00000601665 DCAF1Q9Y4B6 1507 aa25.73■■□□□ 1.71
NUP62-223ENST00000601665 DNAJC5Q9H3Z4 198 aa25.57■■□□□ 1.68
NUP62-223ENST00000601665 CUX2O14529 1486 aa25■■□□□ 1.59
NUP62-223ENST00000601665 ERCC6Q03468 1493 aa24.96■■□□□ 1.59
NUP62-223ENST00000601665 NCAPD3P42695 1498 aa24.76■■□□□ 1.55
NUP62-223ENST00000601665 ATAD2BQ9ULI0 1458 aa24.62■■□□□ 1.53
NUP62-223ENST00000601665 SMARCA2P51531 1590 aa24.56■■□□□ 1.52
NUP62-223ENST00000601665 NESP48681 1621 aa24.54■■□□□ 1.52
NUP62-223ENST00000601665 HMGXB3Q12766 1538 aa24.53■■□□□ 1.52
NUP62-223ENST00000601665 SMARCA4P51532 1647 aa24.46■■□□□ 1.51
NUP62-223ENST00000601665 BAZ1BQ9UIG0 1483 aaKnown RBP24.41■■□□□ 1.5
NUP62-223ENST00000601665 THOC2Q8NI27 1593 aaKnown RBP24.36■■□□□ 1.49
NUP62-223ENST00000601665 TRIM41Q8WV44 630 aa24.34■■□□□ 1.49
NUP62-223ENST00000601665 BAZ1AQ9NRL2 1556 aaPredicted RBP24.3■■□□□ 1.48
NUP62-223ENST00000601665 LAMC3Q9Y6N6 1575 aa24.3■■□□□ 1.48
NUP62-223ENST00000601665 PDS5BQ9NTI5 1447 aa24.24■■□□□ 1.47
NUP62-223ENST00000601665 KIF21AQ7Z4S6 1674 aa24.19■■□□□ 1.46
NUP62-223ENST00000601665 PEG3Q9GZU2 1588 aa24.19■■□□□ 1.46
NUP62-223ENST00000601665 MROH2BQ7Z745 1585 aa24.04■■□□□ 1.44
NUP62-223ENST00000601665 MRC2Q9UBG0 1479 aa24.03■■□□□ 1.44
NUP62-223ENST00000601665 CADPSQ9ULU8 1353 aa24.03■■□□□ 1.44
NUP62-223ENST00000601665 WDR62O43379 1518 aa23.94■■□□□ 1.42
NUP62-223ENST00000601665 CEP164Q9UPV0 1460 aa23.85■■□□□ 1.41
NUP62-223ENST00000601665 OSCARQ8IYS5 282 aa23.84■■□□□ 1.41
NUP62-223ENST00000601665 FANCD2Q9BXW9 1451 aa23.75■■□□□ 1.39
NUP62-223ENST00000601665 WIZO95785 1651 aa23.73■■□□□ 1.39
NUP62-223ENST00000601665 CFTRP13569 1480 aa23.62■■□□□ 1.37
NUP62-223ENST00000601665 URB2Q14146 1524 aaKnown RBP23.55■■□□□ 1.36
NUP62-223ENST00000601665 RIMBP3CA6NJZ7 1639 aa23.5■■□□□ 1.35
NUP62-223ENST00000601665 RIMBP3BA6NNM3 1639 aa23.5■■□□□ 1.35
NUP62-223ENST00000601665 RIMBP3Q9UFD9 1639 aa23.5■■□□□ 1.35
NUP62-223ENST00000601665 TOP2AP11388 1531 aaKnown RBP23.42■■□□□ 1.34
NUP62-223ENST00000601665 ARHGEF11O15085 1522 aa23.39■■□□□ 1.34
NUP62-223ENST00000601665 IFT140Q96RY7 1462 aa23.38■■□□□ 1.33
NUP62-223ENST00000601665 RSF1Q96T23 1441 aaPredicted RBP23.37■■□□□ 1.33
NUP62-223ENST00000601665 ZNF608Q9ULD9 1512 aaPredicted RBP23.36■■□□□ 1.33
NUP62-223ENST00000601665 CYB5RLQ6IPT4 315 aa23.33■■□□□ 1.33
NUP62-223ENST00000601665 TRHP20396 242 aaPredicted RBP23.3■■□□□ 1.32
NUP62-223ENST00000601665 PRDM2Q13029 1718 aa23.29■■□□□ 1.32
NUP62-223ENST00000601665 TOPBP1Q92547 1522 aa23.23■■□□□ 1.31
NUP62-223ENST00000601665 EIF4G3O43432 1585 aaKnown RBP23.21■■□□□ 1.31
NUP62-223ENST00000601665 FBLN2P98095 1184 aa23.18■■□□□ 1.3
NUP62-223ENST00000601665 ABCC8Q09428 1581 aa23.18■■□□□ 1.3
NUP62-223ENST00000601665 CCDC88BA6NC98 1476 aa23.16■■□□□ 1.3
NUP62-223ENST00000601665 AQRO60306 1485 aaKnown RBP eCLIP23.11■■□□□ 1.291e-7■■■□□ 18.3
NUP62-223ENST00000601665 ARAP1Q96P48 1450 aa23.11■■□□□ 1.29
NUP62-223ENST00000601665 CHD1O14646 1710 aa23.11■■□□□ 1.29
NUP62-223ENST00000601665 DNMBPQ6XZF7 1577 aa23.1■■□□□ 1.29
NUP62-223ENST00000601665 AEBP2Q6ZN18 517 aaPredicted RBP23.03■■□□□ 1.28
NUP62-223ENST00000601665 TARBP1Q13395 1621 aaKnown RBP23.01■■□□□ 1.27
NUP62-223ENST00000601665 POLA1P09884 1462 aaPredicted RBP22.96■■□□□ 1.27
NUP62-223ENST00000601665 TDRD9Q8NDG6 1382 aaKnown RBP22.91■■□□□ 1.26
NUP62-223ENST00000601665 CHMP7Q8WUX9 453 aaPredicted RBP22.9■■□□□ 1.26
NUP62-223ENST00000601665 RAD54L2Q9Y4B4 1467 aa22.9■■□□□ 1.26
NUP62-223ENST00000601665 SOGA1O94964 1423 aa22.89■■□□□ 1.25
NUP62-223ENST00000601665 SNAPC4Q5SXM2 1469 aa22.86■■□□□ 1.25
NUP62-223ENST00000601665 SYNJ1O43426 1573 aa22.84■■□□□ 1.25
NUP62-223ENST00000601665 CLASP1Q7Z460 1538 aa22.82■■□□□ 1.24
NUP62-223ENST00000601665 MAGI1Q96QZ7 1491 aaPredicted RBP22.79■■□□□ 1.24
NUP62-223ENST00000601665 WDR97A6NE52 1622 aa22.78■■□□□ 1.24
NUP62-223ENST00000601665 FGD5Q6ZNL6 1462 aa22.76■■□□□ 1.23
NUP62-223ENST00000601665 GRIN2BQ13224 1484 aa22.74■■□□□ 1.23
NUP62-223ENST00000601665 SYNJ2O15056 1496 aa22.72■■□□□ 1.23
NUP62-223ENST00000601665 GAPVD1Q14C86 1478 aa22.68■■□□□ 1.22
NUP62-223ENST00000601665 CUX1P39880 1505 aa22.62■■□□□ 1.21
NUP62-223ENST00000601665 PBRM1Q86U86 1689 aa22.56■■□□□ 1.2
NUP62-223ENST00000601665 ABCA10Q8WWZ4 1543 aa22.46■■□□□ 1.19
NUP62-223ENST00000601665 ABCA5Q8WWZ7 1642 aa22.44■■□□□ 1.18
NUP62-223ENST00000601665 ERCC6L2Q5T890 1561 aa22.43■■□□□ 1.18
NUP62-223ENST00000601665 GRIN2AQ12879 1464 aa22.43■■□□□ 1.18
NUP62-223ENST00000601665 CEP170Q5SW79 1584 aa22.38■■□□□ 1.17
NUP62-223ENST00000601665 NUP160Q12769 1436 aa22.34■■□□□ 1.17
NUP62-223ENST00000601665 ADAMTS12P58397 1594 aa22.33■■□□□ 1.16
NUP62-223ENST00000601665 WRNQ14191 1432 aaPredicted RBP eCLIP22.32■■□□□ 1.16
NUP62-223ENST00000601665 FHAD1B1AJZ9 1412 aa22.29■■□□□ 1.16
NUP62-223ENST00000601665 SHROOM2Q13796 1616 aa22.28■■□□□ 1.16
NUP62-223ENST00000601665 KIF13AQ9H1H9 1805 aa22.24■■□□□ 1.15
NUP62-223ENST00000601665 NPM1P06748 294 aaKnown RBP eCLIP22.24■■□□□ 1.15
NUP62-223ENST00000601665 PRG4Q92954 1404 aaPredicted RBP22.23■■□□□ 1.15
NUP62-223ENST00000601665 FAM69CQ0P6D2 419 aa22.22■■□□□ 1.15
NUP62-223ENST00000601665 JPH4Q96JJ6 628 aa22.18■■□□□ 1.14
NUP62-223ENST00000601665 ERICH3Q5RHP9 1530 aa22.16■■□□□ 1.14
NUP62-223ENST00000601665 ABCC10Q5T3U5 1492 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms