RNA–Protein interactions for RNA: ENST00000433382.5

TRAPPC12-207, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-207ENST00000433382 NISCHQ9Y2I1 1504 aa30.7■■■□□ 2.51
TRAPPC12-207ENST00000433382 CCDC180Q9P1Z9 1646 aa27.39■■□□□ 1.98
TRAPPC12-207ENST00000433382 ABCC9O60706 1549 aa26.77■■□□□ 1.88
TRAPPC12-207ENST00000433382 RB1CC1Q8TDY2 1594 aa25.7■■□□□ 1.71
TRAPPC12-207ENST00000433382 NACADO15069 1562 aa25.67■■□□□ 1.7
TRAPPC12-207ENST00000433382 ZCCHC6Q5VYS8 1495 aaKnown RBP25.57■■□□□ 1.68
TRAPPC12-207ENST00000433382 MYO15BQ96JP2 1530 aa25.5■■□□□ 1.67
TRAPPC12-207ENST00000433382 UNC13AQ9UPW8 1703 aa25.49■■□□□ 1.67
TRAPPC12-207ENST00000433382 DCAF8L2P0C7V8 631 aa25.42■■□□□ 1.66
TRAPPC12-207ENST00000433382 DCAF1Q9Y4B6 1507 aa25.38■■□□□ 1.65
TRAPPC12-207ENST00000433382 BICRAQ9NZM4 1560 aa25.14■■□□□ 1.61
TRAPPC12-207ENST00000433382 PABPN1Q86U42 306 aaKnown RBP eCLIP24.95■■□□□ 1.58
TRAPPC12-207ENST00000433382 SCRIBQ14160 1630 aa24.94■■□□□ 1.58
TRAPPC12-207ENST00000433382 DNAJC5BQ9UF47 199 aa24.77■■□□□ 1.56
TRAPPC12-207ENST00000433382 SHROOM4Q9ULL8 1493 aa24.61■■□□□ 1.53
TRAPPC12-207ENST00000433382 EIF4G1Q04637 1599 aaKnown RBP24.35■■□□□ 1.49
TRAPPC12-207ENST00000433382 CC2D2AQ9P2K1 1620 aa24.31■■□□□ 1.48
TRAPPC12-207ENST00000433382 CECR2Q9BXF3 1484 aa24.02■■□□□ 1.44
TRAPPC12-207ENST00000433382 SMARCA4P51532 1647 aa23.88■■□□□ 1.41
TRAPPC12-207ENST00000433382 BAZ1AQ9NRL2 1556 aaPredicted RBP23.74■■□□□ 1.39
TRAPPC12-207ENST00000433382 MROH2BQ7Z745 1585 aa23.71■■□□□ 1.39
TRAPPC12-207ENST00000433382 ATAD2BQ9ULI0 1458 aa23.71■■□□□ 1.39
TRAPPC12-207ENST00000433382 NCAPD3P42695 1498 aa23.68■■□□□ 1.38
TRAPPC12-207ENST00000433382 PEG3Q9GZU2 1588 aa23.66■■□□□ 1.38
TRAPPC12-207ENST00000433382 SMARCA2P51531 1590 aa23.62■■□□□ 1.37
TRAPPC12-207ENST00000433382 HMGXB3Q12766 1538 aa23.59■■□□□ 1.37
TRAPPC12-207ENST00000433382 WIZO95785 1651 aa23.51■■□□□ 1.35
TRAPPC12-207ENST00000433382 BAZ1BQ9UIG0 1483 aaKnown RBP23.43■■□□□ 1.34
TRAPPC12-207ENST00000433382 RSF1Q96T23 1441 aaPredicted RBP23.33■■□□□ 1.33
TRAPPC12-207ENST00000433382 NESP48681 1621 aa23.23■■□□□ 1.31
TRAPPC12-207ENST00000433382 TOP2AP11388 1531 aaKnown RBP23.13■■□□□ 1.29
TRAPPC12-207ENST00000433382 LAMC3Q9Y6N6 1575 aa23.09■■□□□ 1.29
TRAPPC12-207ENST00000433382 KIF21AQ7Z4S6 1674 aa23.06■■□□□ 1.28
TRAPPC12-207ENST00000433382 THOC2Q8NI27 1593 aaKnown RBP22.95■■□□□ 1.26
TRAPPC12-207ENST00000433382 ERCC6Q03468 1493 aa22.93■■□□□ 1.26
TRAPPC12-207ENST00000433382 CADPSQ9ULU8 1353 aa22.93■■□□□ 1.26
TRAPPC12-207ENST00000433382 PRDM2Q13029 1718 aa22.89■■□□□ 1.26
TRAPPC12-207ENST00000433382 CCDC88BA6NC98 1476 aa22.87■■□□□ 1.25
TRAPPC12-207ENST00000433382 CFTRP13569 1480 aa22.85■■□□□ 1.25
TRAPPC12-207ENST00000433382 CUX2O14529 1486 aa22.81■■□□□ 1.24
TRAPPC12-207ENST00000433382 PDS5BQ9NTI5 1447 aa22.8■■□□□ 1.24
TRAPPC12-207ENST00000433382 FANCD2Q9BXW9 1451 aa22.7■■□□□ 1.22
TRAPPC12-207ENST00000433382 WDR62O43379 1518 aa22.67■■□□□ 1.22
TRAPPC12-207ENST00000433382 MRC2Q9UBG0 1479 aa22.66■■□□□ 1.22
TRAPPC12-207ENST00000433382 CEP164Q9UPV0 1460 aa22.65■■□□□ 1.22
TRAPPC12-207ENST00000433382 URB2Q14146 1524 aaKnown RBP22.57■■□□□ 1.2
TRAPPC12-207ENST00000433382 SUPT5HO00267 1087 aaKnown RBP22.52■■□□□ 1.2
TRAPPC12-207ENST00000433382 TOPBP1Q92547 1522 aa22.38■■□□□ 1.17
TRAPPC12-207ENST00000433382 DNMBPQ6XZF7 1577 aa22.34■■□□□ 1.17
TRAPPC12-207ENST00000433382 TARBP1Q13395 1621 aaKnown RBP22.25■■□□□ 1.15
TRAPPC12-207ENST00000433382 ABCC8Q09428 1581 aa22.25■■□□□ 1.15
TRAPPC12-207ENST00000433382 CUX1P39880 1505 aa22.24■■□□□ 1.15
TRAPPC12-207ENST00000433382 DNAJC5Q9H3Z4 198 aa22.21■■□□□ 1.15
TRAPPC12-207ENST00000433382 ZNF608Q9ULD9 1512 aaPredicted RBP22.21■■□□□ 1.15
TRAPPC12-207ENST00000433382 POLA1P09884 1462 aaPredicted RBP22.18■■□□□ 1.14
TRAPPC12-207ENST00000433382 IFT140Q96RY7 1462 aa22.17■■□□□ 1.14
TRAPPC12-207ENST00000433382 EIF4G3O43432 1585 aaKnown RBP22.12■■□□□ 1.13
TRAPPC12-207ENST00000433382 WDR97A6NE52 1622 aa22.12■■□□□ 1.13
TRAPPC12-207ENST00000433382 FGD5Q6ZNL6 1462 aa22.1■■□□□ 1.13
TRAPPC12-207ENST00000433382 RAD54L2Q9Y4B4 1467 aa22.1■■□□□ 1.13
TRAPPC12-207ENST00000433382 BIVM-ERCC5R4GMW8 1640 aa22.06■■□□□ 1.12
TRAPPC12-207ENST00000433382 SYNJ1O43426 1573 aa22.04■■□□□ 1.12
TRAPPC12-207ENST00000433382 TOP2BQ02880 1626 aa22.01■■□□□ 1.11
TRAPPC12-207ENST00000433382 AQRO60306 1485 aaKnown RBP eCLIP22.01■■□□□ 1.11
TRAPPC12-207ENST00000433382 SOGA1O94964 1423 aa22■■□□□ 1.11
TRAPPC12-207ENST00000433382 CHD1O14646 1710 aa21.97■■□□□ 1.11
TRAPPC12-207ENST00000433382 PBRM1Q86U86 1689 aa21.92■■□□□ 1.1
TRAPPC12-207ENST00000433382 WRNQ14191 1432 aaPredicted RBP eCLIP21.92■■□□□ 1.1
TRAPPC12-207ENST00000433382 TDRD9Q8NDG6 1382 aaKnown RBP21.91■■□□□ 1.1
TRAPPC12-207ENST00000433382 ABCA5Q8WWZ7 1642 aa21.91■■□□□ 1.1
TRAPPC12-207ENST00000433382 ABCA10Q8WWZ4 1543 aa21.89■■□□□ 1.09
TRAPPC12-207ENST00000433382 SNAPC4Q5SXM2 1469 aa21.79■■□□□ 1.08
TRAPPC12-207ENST00000433382 GAPVD1Q14C86 1478 aa21.77■■□□□ 1.08
TRAPPC12-207ENST00000433382 GRIN2BQ13224 1484 aa21.76■■□□□ 1.07
TRAPPC12-207ENST00000433382 OSCARQ8IYS5 282 aa21.75■■□□□ 1.07
TRAPPC12-207ENST00000433382 MAGI1Q96QZ7 1491 aaPredicted RBP21.72■■□□□ 1.07
TRAPPC12-207ENST00000433382 RIMBP3CA6NJZ7 1639 aa21.66■■□□□ 1.06
TRAPPC12-207ENST00000433382 RIMBP3BA6NNM3 1639 aa21.66■■□□□ 1.06
TRAPPC12-207ENST00000433382 RIMBP3Q9UFD9 1639 aa21.66■■□□□ 1.06
TRAPPC12-207ENST00000433382 ADAMTS12P58397 1594 aa21.65■■□□□ 1.06
TRAPPC12-207ENST00000433382 SYNJ2O15056 1496 aa21.64■■□□□ 1.06
TRAPPC12-207ENST00000433382 CLASP1Q7Z460 1538 aa21.64■■□□□ 1.05
TRAPPC12-207ENST00000433382 ERICH3Q5RHP9 1530 aa21.6■■□□□ 1.05
TRAPPC12-207ENST00000433382 ARHGEF11O15085 1522 aa21.57■■□□□ 1.04
TRAPPC12-207ENST00000433382 FBLN2P98095 1184 aa21.57■■□□□ 1.04
TRAPPC12-207ENST00000433382 CEP170Q5SW79 1584 aa21.53■■□□□ 1.04
TRAPPC12-207ENST00000433382 GRIN2AQ12879 1464 aa21.52■■□□□ 1.04
TRAPPC12-207ENST00000433382 CHMP7Q8WUX9 453 aaPredicted RBP21.5■■□□□ 1.03
TRAPPC12-207ENST00000433382 FHAD1B1AJZ9 1412 aa21.48■■□□□ 1.03
TRAPPC12-207ENST00000433382 NUP160Q12769 1436 aa21.46■■□□□ 1.03
TRAPPC12-207ENST00000433382 IGF1RP08069 1367 aa21.44■■□□□ 1.02
TRAPPC12-207ENST00000433382 RUSC2Q8N2Y8 1516 aa21.44■■□□□ 1.02
TRAPPC12-207ENST00000433382 SHROOM2Q13796 1616 aa21.42■■□□□ 1.02
TRAPPC12-207ENST00000433382 CUL7Q14999 1698 aa21.42■■□□□ 1.02
TRAPPC12-207ENST00000433382 ARAP1Q96P48 1450 aa21.42■■□□□ 1.02
TRAPPC12-207ENST00000433382 KIF27Q86VH2 1401 aa21.41■■□□□ 1.02
TRAPPC12-207ENST00000433382 ERCC6L2Q5T890 1561 aa21.4■■□□□ 1.02
TRAPPC12-207ENST00000433382 TRIM41Q8WV44 630 aa21.35■■□□□ 1.01
TRAPPC12-207ENST00000433382 CARMIL1Q5VZK9 1371 aa21.24■□□□□ 0.99
TRAPPC12-207ENST00000433382 CYB5RLQ6IPT4 315 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 177.4 ms