RNA–Protein interactions for RNA: ENST00000517513.5

CASP3-205, Transcript of caspase 3, humanhuman

TSL 5 BASIC

Gene CASP3, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-205ENST00000517513 NISCHQ9Y2I1 1504 aa32.92■■■□□ 2.86
CASP3-205ENST00000517513 ABCC9O60706 1549 aa29.51■■■□□ 2.32
CASP3-205ENST00000517513 CCDC180Q9P1Z9 1646 aa29.42■■■□□ 2.3
CASP3-205ENST00000517513 RB1CC1Q8TDY2 1594 aa28.07■■■□□ 2.08
CASP3-205ENST00000517513 DCAF8L2P0C7V8 631 aa27.93■■■□□ 2.06
CASP3-205ENST00000517513 NACADO15069 1562 aa27.88■■■□□ 2.05
CASP3-205ENST00000517513 DNAJC5BQ9UF47 199 aa27.57■■■□□ 2
CASP3-205ENST00000517513 PABPN1Q86U42 306 aaKnown RBP eCLIP27.53■■■□□ 2
CASP3-205ENST00000517513 MYO15BQ96JP2 1530 aa27.49■■□□□ 1.99
CASP3-205ENST00000517513 ZCCHC6Q5VYS8 1495 aaKnown RBP27.31■■□□□ 1.96
CASP3-205ENST00000517513 UNC13AQ9UPW8 1703 aa27.21■■□□□ 1.95
CASP3-205ENST00000517513 DCAF1Q9Y4B6 1507 aa27.17■■□□□ 1.94
CASP3-205ENST00000517513 BICRAQ9NZM4 1560 aa27.17■■□□□ 1.94
CASP3-205ENST00000517513 SCRIBQ14160 1630 aa26.91■■□□□ 1.9
CASP3-205ENST00000517513 SHROOM4Q9ULL8 1493 aa26.89■■□□□ 1.9
CASP3-205ENST00000517513 CECR2Q9BXF3 1484 aa26.58■■□□□ 1.85
CASP3-205ENST00000517513 CC2D2AQ9P2K1 1620 aa26.57■■□□□ 1.84
CASP3-205ENST00000517513 EIF4G1Q04637 1599 aaKnown RBP26.55■■□□□ 1.84
CASP3-205ENST00000517513 NCAPD3P42695 1498 aa25.76■■□□□ 1.71
CASP3-205ENST00000517513 ATAD2BQ9ULI0 1458 aa25.7■■□□□ 1.7
CASP3-205ENST00000517513 SMARCA4P51532 1647 aa25.63■■□□□ 1.69
CASP3-205ENST00000517513 SMARCA2P51531 1590 aa25.63■■□□□ 1.69
CASP3-205ENST00000517513 BAZ1AQ9NRL2 1556 aaPredicted RBP25.56■■□□□ 1.68
CASP3-205ENST00000517513 HMGXB3Q12766 1538 aa25.55■■□□□ 1.68
CASP3-205ENST00000517513 ERCC6Q03468 1493 aa25.53■■□□□ 1.68
CASP3-205ENST00000517513 BAZ1BQ9UIG0 1483 aaKnown RBP25.49■■□□□ 1.67
CASP3-205ENST00000517513 CUX2O14529 1486 aa25.38■■□□□ 1.65
CASP3-205ENST00000517513 MROH2BQ7Z745 1585 aa25.37■■□□□ 1.65
CASP3-205ENST00000517513 PEG3Q9GZU2 1588 aa25.36■■□□□ 1.65
CASP3-205ENST00000517513 NESP48681 1621 aa25.33■■□□□ 1.65
CASP3-205ENST00000517513 DNAJC5Q9H3Z4 198 aa25.3■■□□□ 1.64
CASP3-205ENST00000517513 LAMC3Q9Y6N6 1575 aa25.13■■□□□ 1.61
CASP3-205ENST00000517513 PDS5BQ9NTI5 1447 aa25.08■■□□□ 1.61
CASP3-205ENST00000517513 CADPSQ9ULU8 1353 aa25.02■■□□□ 1.6
CASP3-205ENST00000517513 WIZO95785 1651 aa25.01■■□□□ 1.59
CASP3-205ENST00000517513 THOC2Q8NI27 1593 aaKnown RBP25■■□□□ 1.59
CASP3-205ENST00000517513 RSF1Q96T23 1441 aaPredicted RBP24.9■■□□□ 1.58
CASP3-205ENST00000517513 KIF21AQ7Z4S6 1674 aa24.9■■□□□ 1.58
CASP3-205ENST00000517513 MRC2Q9UBG0 1479 aa24.83■■□□□ 1.57
CASP3-205ENST00000517513 TOP2AP11388 1531 aaKnown RBP24.77■■□□□ 1.56
CASP3-205ENST00000517513 CEP164Q9UPV0 1460 aa24.76■■□□□ 1.55
CASP3-205ENST00000517513 FANCD2Q9BXW9 1451 aa24.73■■□□□ 1.55
CASP3-205ENST00000517513 WDR62O43379 1518 aa24.72■■□□□ 1.55
CASP3-205ENST00000517513 CFTRP13569 1480 aa24.71■■□□□ 1.55
CASP3-205ENST00000517513 CCDC88BA6NC98 1476 aa24.5■■□□□ 1.51
CASP3-205ENST00000517513 URB2Q14146 1524 aaKnown RBP24.48■■□□□ 1.51
CASP3-205ENST00000517513 TRIM41Q8WV44 630 aa24.32■■□□□ 1.48
CASP3-205ENST00000517513 OSCARQ8IYS5 282 aa24.29■■□□□ 1.48
CASP3-205ENST00000517513 PRDM2Q13029 1718 aa24.28■■□□□ 1.48
CASP3-205ENST00000517513 IFT140Q96RY7 1462 aa24.26■■□□□ 1.47
CASP3-205ENST00000517513 TOPBP1Q92547 1522 aa24.25■■□□□ 1.47
CASP3-205ENST00000517513 ABCC8Q09428 1581 aa24.21■■□□□ 1.47
CASP3-205ENST00000517513 ZNF608Q9ULD9 1512 aaPredicted RBP24.19■■□□□ 1.46
CASP3-205ENST00000517513 DNMBPQ6XZF7 1577 aa24.14■■□□□ 1.45
CASP3-205ENST00000517513 EIF4G3O43432 1585 aaKnown RBP24.02■■□□□ 1.44
CASP3-205ENST00000517513 AQRO60306 1485 aaKnown RBP eCLIP24■■□□□ 1.43
CASP3-205ENST00000517513 POLA1P09884 1462 aaPredicted RBP24■■□□□ 1.43
CASP3-205ENST00000517513 SUPT5HO00267 1087 aaKnown RBP23.97■■□□□ 1.43
CASP3-205ENST00000517513 TARBP1Q13395 1621 aaKnown RBP23.95■■□□□ 1.42
CASP3-205ENST00000517513 RAD54L2Q9Y4B4 1467 aa23.94■■□□□ 1.42
CASP3-205ENST00000517513 SOGA1O94964 1423 aa23.93■■□□□ 1.42
CASP3-205ENST00000517513 FBLN2P98095 1184 aa23.93■■□□□ 1.42
CASP3-205ENST00000517513 TDRD9Q8NDG6 1382 aaKnown RBP23.9■■□□□ 1.42
CASP3-205ENST00000517513 FGD5Q6ZNL6 1462 aa23.87■■□□□ 1.41
CASP3-205ENST00000517513 RIMBP3CA6NJZ7 1639 aa23.84■■□□□ 1.41
CASP3-205ENST00000517513 RIMBP3BA6NNM3 1639 aa23.84■■□□□ 1.41
CASP3-205ENST00000517513 RIMBP3Q9UFD9 1639 aa23.84■■□□□ 1.41
CASP3-205ENST00000517513 ARHGEF11O15085 1522 aa23.84■■□□□ 1.41
CASP3-205ENST00000517513 CUX1P39880 1505 aa23.84■■□□□ 1.41
CASP3-205ENST00000517513 SNAPC4Q5SXM2 1469 aa23.76■■□□□ 1.39
CASP3-205ENST00000517513 CHD1O14646 1710 aa23.75■■□□□ 1.39
CASP3-205ENST00000517513 CYB5RLQ6IPT4 315 aa23.74■■□□□ 1.39
CASP3-205ENST00000517513 WDR97A6NE52 1622 aa23.73■■□□□ 1.39
CASP3-205ENST00000517513 CHMP7Q8WUX9 453 aaPredicted RBP23.73■■□□□ 1.39
CASP3-205ENST00000517513 GRIN2BQ13224 1484 aa23.71■■□□□ 1.39
CASP3-205ENST00000517513 MAGI1Q96QZ7 1491 aaPredicted RBP23.68■■□□□ 1.38
CASP3-205ENST00000517513 GAPVD1Q14C86 1478 aa23.63■■□□□ 1.37
CASP3-205ENST00000517513 SYNJ2O15056 1496 aa23.62■■□□□ 1.37
CASP3-205ENST00000517513 ARAP1Q96P48 1450 aa23.61■■□□□ 1.37
CASP3-205ENST00000517513 ABCA10Q8WWZ4 1543 aa23.59■■□□□ 1.37
CASP3-205ENST00000517513 SYNJ1O43426 1573 aa23.59■■□□□ 1.37
CASP3-205ENST00000517513 WRNQ14191 1432 aaPredicted RBP eCLIP23.58■■□□□ 1.36
CASP3-205ENST00000517513 CLASP1Q7Z460 1538 aa23.54■■□□□ 1.36
CASP3-205ENST00000517513 TRHP20396 242 aaPredicted RBP23.5■■□□□ 1.35
CASP3-205ENST00000517513 ABCA5Q8WWZ7 1642 aa23.5■■□□□ 1.35
CASP3-205ENST00000517513 PBRM1Q86U86 1689 aa23.48■■□□□ 1.35
CASP3-205ENST00000517513 TOP2BQ02880 1626 aa23.44■■□□□ 1.34
CASP3-205ENST00000517513 BIVM-ERCC5R4GMW8 1640 aa23.41■■□□□ 1.34
CASP3-205ENST00000517513 GRIN2AQ12879 1464 aa23.39■■□□□ 1.34
CASP3-205ENST00000517513 ADAMTS12P58397 1594 aa23.35■■□□□ 1.33
CASP3-205ENST00000517513 FHAD1B1AJZ9 1412 aa23.34■■□□□ 1.33
CASP3-205ENST00000517513 NUP160Q12769 1436 aa23.3■■□□□ 1.32
CASP3-205ENST00000517513 ERICH3Q5RHP9 1530 aa23.29■■□□□ 1.32
CASP3-205ENST00000517513 CEP170Q5SW79 1584 aa23.25■■□□□ 1.31
CASP3-205ENST00000517513 AEBP2Q6ZN18 517 aaPredicted RBP23.22■■□□□ 1.31
CASP3-205ENST00000517513 ERCC6L2Q5T890 1561 aa23.18■■□□□ 1.3
CASP3-205ENST00000517513 PRG4Q92954 1404 aaPredicted RBP23.12■■□□□ 1.29
CASP3-205ENST00000517513 KIF27Q86VH2 1401 aa23.1■■□□□ 1.29
CASP3-205ENST00000517513 JPH4Q96JJ6 628 aa23.1■■□□□ 1.29
CASP3-205ENST00000517513 SHROOM2Q13796 1616 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms