RNA–Protein interactions for RNA: ENST00000335698.4

ATP5C1-201, Transcript of ATP synthase subunit gamma, mitochondrial, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATP5C1, Length 1,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP5C1-201ENST00000335698 AEBP2Q6ZN18 517 aaPredicted RBP46,56■■■■■ 5,04
ATP5C1-201ENST00000335698 CHIC1Q5VXU3 224 aa44,05■■■■■ 4,64
ATP5C1-201ENST00000335698 SENP3Q9H4L4 574 aaPredicted RBP39,71■■■■□ 3,95
ATP5C1-201ENST00000335698 PHF23Q9BUL5 403 aaPredicted RBP39,16■■■■□ 3,86
ATP5C1-201ENST00000335698 FOXD1Q16676 465 aa37,05■■■■□ 3,52
ATP5C1-201ENST00000335698 PLPPR3Q6T4P5 718 aa35,1■■■■□ 3,21
ATP5C1-201ENST00000335698 MSH5O43196 834 aa34,71■■■■□ 3,15
ATP5C1-201ENST00000335698 PIAS4Q8N2W9 510 aaPredicted RBP34,55■■■■□ 3,12
ATP5C1-201ENST00000335698 PPP6R1Q9UPN7 881 aa34,52■■■■□ 3,12
ATP5C1-201ENST00000335698 ADRA2BP18089 450 aa34,38■■■■□ 3,09
ATP5C1-201ENST00000335698 POTEDQ86YR6 584 aa34,16■■■■□ 3,06
ATP5C1-201ENST00000335698 NISCHQ9Y2I1 1504 aa32,46■■■□□ 2,79
ATP5C1-201ENST00000335698 MAPK8IP2Q13387 824 aaPredicted RBP31,62■■■□□ 2,65
ATP5C1-201ENST00000335698 DMRT2Q9Y5R5 561 aa31,49■■■□□ 2,63
ATP5C1-201ENST00000335698 SCAF1Q9H7N4 1312 aaKnown RBP31,43■■■□□ 2,62
ATP5C1-201ENST00000335698 PPP4R3CPQ6ZMV5 832 aa30,75■■■□□ 2,51
ATP5C1-201ENST00000335698 HOXD11P31277 338 aaPredicted RBP30,27■■■□□ 2,44
ATP5C1-201ENST00000335698 CNKSR2Q8WXI2 1034 aa30,21■■■□□ 2,43
ATP5C1-201ENST00000335698 DCAF8L1A6NGE4 600 aa30,12■■■□□ 2,41
ATP5C1-201ENST00000335698 RNF216Q9NWF9 866 aaPredicted RBP29,99■■■□□ 2,39
ATP5C1-201ENST00000335698 CACNB1Q02641 598 aaPredicted RBP29,85■■■□□ 2,37
ATP5C1-201ENST00000335698 RNF39Q9H2S5 420 aa29,63■■■□□ 2,33
ATP5C1-201ENST00000335698 NCBP3Q53F19 620 aaKnown RBP29,49■■■□□ 2,31
ATP5C1-201ENST00000335698 DNAJC5BQ9UF47 199 aa29,28■■■□□ 2,28
ATP5C1-201ENST00000335698 C1QBPQ07021 282 aaKnown RBP29,17■■■□□ 2,26
ATP5C1-201ENST00000335698 NPM3O75607 178 aaKnown RBP29,11■■■□□ 2,25
ATP5C1-201ENST00000335698 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28,78■■■□□ 2,21e-8■□□□□ 9,8
ATP5C1-201ENST00000335698 CCDC180Q9P1Z9 1646 aa28,65■■■□□ 2,18
ATP5C1-201ENST00000335698 KCNA4P22459 653 aa28,41■■■□□ 2,14
ATP5C1-201ENST00000335698 U3KPZ7 1027 aaPredicted RBP28,22■■■□□ 2,11
ATP5C1-201ENST00000335698 ABCC9O60706 1549 aa27,89■■■□□ 2,06
ATP5C1-201ENST00000335698 SLC4A2P04920 1241 aa27,86■■■□□ 2,05
ATP5C1-201ENST00000335698 SPINK5Q9NQ38 1064 aaPredicted RBP27,84■■■□□ 2,05
ATP5C1-201ENST00000335698 CAPN15O75808 1086 aa27,76■■■□□ 2,03
ATP5C1-201ENST00000335698 DSG3P32926 999 aa27,69■■■□□ 2,02
ATP5C1-201ENST00000335698 APLP2Q06481 763 aa27,36■■□□□ 1,97
ATP5C1-201ENST00000335698 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27,31■■□□□ 1,96
ATP5C1-201ENST00000335698 HNRNPUL2Q1KMD3 747 aaKnown RBP27,31■■□□□ 1,96
ATP5C1-201ENST00000335698 TRHP20396 242 aaPredicted RBP27,27■■□□□ 1,96
ATP5C1-201ENST00000335698 ZNF219Q9P2Y4 722 aaPredicted RBP27,25■■□□□ 1,95
ATP5C1-201ENST00000335698 DCAF8L2P0C7V8 631 aa27,18■■□□□ 1,94
ATP5C1-201ENST00000335698 SAMD1Q6SPF0 538 aaPredicted RBP27,17■■□□□ 1,94
ATP5C1-201ENST00000335698 ABCB7O75027 752 aa27,11■■□□□ 1,93
ATP5C1-201ENST00000335698 ZCCHC6Q5VYS8 1495 aaKnown RBP27,06■■□□□ 1,92
ATP5C1-201ENST00000335698 MYCNP04198 464 aaPredicted RBP26,92■■□□□ 1,9
ATP5C1-201ENST00000335698 NACADO15069 1562 aa26,91■■□□□ 1,9
ATP5C1-201ENST00000335698 RB1CC1Q8TDY2 1594 aa26,88■■□□□ 1,89
ATP5C1-201ENST00000335698 DCAF1Q9Y4B6 1507 aa26,82■■□□□ 1,88
ATP5C1-201ENST00000335698 MYO15BQ96JP2 1530 aa26,81■■□□□ 1,88
ATP5C1-201ENST00000335698 SLC4A1APQ9BWU0 796 aaKnown RBP26,76■■□□□ 1,87
ATP5C1-201ENST00000335698 POTEHQ6S545 545 aa26,73■■□□□ 1,87
ATP5C1-201ENST00000335698 FOXD4L1Q9NU39 408 aa26,56■■□□□ 1,84
ATP5C1-201ENST00000335698 POLA2Q14181 598 aa26,52■■□□□ 1,84
ATP5C1-201ENST00000335698 RBM42Q9BTD8 480 aaKnown RBP26,4■■□□□ 1,82
ATP5C1-201ENST00000335698 ATF5Q9Y2D1 282 aaPredicted RBP26,33■■□□□ 1,81
ATP5C1-201ENST00000335698 UNC13AQ9UPW8 1703 aa26,25■■□□□ 1,79
ATP5C1-201ENST00000335698 SCRIBQ14160 1630 aa26,24■■□□□ 1,79
ATP5C1-201ENST00000335698 PABPN1Q86U42 306 aaKnown RBP eCLIP26,18■■□□□ 1,78
ATP5C1-201ENST00000335698 ZBTB22O15209 634 aa26,15■■□□□ 1,78
ATP5C1-201ENST00000335698 BICRAQ9NZM4 1560 aa26,07■■□□□ 1,76
ATP5C1-201ENST00000335698 ZBTB12Q9Y330 459 aaPredicted RBP25,98■■□□□ 1,75
ATP5C1-201ENST00000335698 SHROOM4Q9ULL8 1493 aa25,91■■□□□ 1,74
ATP5C1-201ENST00000335698 CHRDL2Q6WN34 429 aa25,89■■□□□ 1,74
ATP5C1-201ENST00000335698 AKT1S1Q96B36 256 aa25,77■■□□□ 1,72
ATP5C1-201ENST00000335698 ATXN8OSP0DMR3 200 aa25,76■■□□□ 1,71
ATP5C1-201ENST00000335698 OSCARQ8IYS5 282 aa25,71■■□□□ 1,71
ATP5C1-201ENST00000335698 REM2Q8IYK8 340 aaPredicted RBP25,52■■□□□ 1,68
ATP5C1-201ENST00000335698 EIF4G1Q04637 1599 aaKnown RBP25,35■■□□□ 1,65
ATP5C1-201ENST00000335698 CECR2Q9BXF3 1484 aa25,3■■□□□ 1,64
ATP5C1-201ENST00000335698 PITPNM1O00562 1244 aa25,27■■□□□ 1,64
ATP5C1-201ENST00000335698 FBLN2P98095 1184 aa25,26■■□□□ 1,63
ATP5C1-201ENST00000335698 PIP4P2Q8N4L2 257 aa25,25■■□□□ 1,63
ATP5C1-201ENST00000335698 CC2D2AQ9P2K1 1620 aa25,19■■□□□ 1,62
ATP5C1-201ENST00000335698 SPDYE2BA6NHP3 402 aa25,18■■□□□ 1,62
ATP5C1-201ENST00000335698 SPDYE6P0CI01 402 aa25,18■■□□□ 1,62
ATP5C1-201ENST00000335698 SPDYE2Q495Y8 402 aa25,18■■□□□ 1,62
ATP5C1-201ENST00000335698 MKRN4PQ13434 485 aaPredicted RBP25,12■■□□□ 1,61
ATP5C1-201ENST00000335698 BAZ1AQ9NRL2 1556 aaPredicted RBP25,11■■□□□ 1,61
ATP5C1-201ENST00000335698 SMARCA4P51532 1647 aa25,1■■□□□ 1,61
ATP5C1-201ENST00000335698 FXR2P51116 673 aaKnown RBP eCLIP25,09■■□□□ 1,61
ATP5C1-201ENST00000335698 MROH2BQ7Z745 1585 aa25,05■■□□□ 1,6
ATP5C1-201ENST00000335698 SP7Q8TDD2 431 aaPredicted RBP24,99■■□□□ 1,59
ATP5C1-201ENST00000335698 ATAD2BQ9ULI0 1458 aa24,93■■□□□ 1,58
ATP5C1-201ENST00000335698 RSF1Q96T23 1441 aaPredicted RBP24,87■■□□□ 1,57
ATP5C1-201ENST00000335698 NCAPD3P42695 1498 aa24,87■■□□□ 1,57
ATP5C1-201ENST00000335698 SMARCA2P51531 1590 aa24,87■■□□□ 1,57
ATP5C1-201ENST00000335698 SSUH2Q9Y2M2 353 aa24,86■■□□□ 1,57
ATP5C1-201ENST00000335698 ZNF692Q9BU19 519 aaPredicted RBP24,82■■□□□ 1,56
ATP5C1-201ENST00000335698 PEG3Q9GZU2 1588 aa24,82■■□□□ 1,56
ATP5C1-201ENST00000335698 HAX1O00165 279 aa24,78■■□□□ 1,56
ATP5C1-201ENST00000335698 CSRNP3Q8WYN3 585 aa24,78■■□□□ 1,56
ATP5C1-201ENST00000335698 WIZO95785 1651 aa24,78■■□□□ 1,56
ATP5C1-201ENST00000335698 SPDYE1Q8NFV5 336 aaPredicted RBP24,76■■□□□ 1,55
ATP5C1-201ENST00000335698 BAZ1BQ9UIG0 1483 aaKnown RBP24,73■■□□□ 1,55
ATP5C1-201ENST00000335698 HMGXB3Q12766 1538 aa24,71■■□□□ 1,55
ATP5C1-201ENST00000335698 CLEC11AQ9Y240 323 aa24,7■■□□□ 1,54
ATP5C1-201ENST00000335698 PRKAR2AP13861 404 aaKnown RBP24,59■■□□□ 1,53
ATP5C1-201ENST00000335698 SUPT5HO00267 1087 aaKnown RBP24,57■■□□□ 1,52
ATP5C1-201ENST00000335698 EVX2Q03828 476 aa24,52■■□□□ 1,52
ATP5C1-201ENST00000335698 TOP2AP11388 1531 aaKnown RBP24,5■■□□□ 1,51
Retrieved 100 of 20,778 RNA–protein pairs in 10,4 ms