RNA–Protein interactions for RNA: ENST00000597029.5

NUP62-211, Transcript of nucleoporin 62, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP62, Length 2,053 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP62-211ENST00000597029 NISCHQ9Y2I1 1504 aa36.17■■■■□ 3.38
NUP62-211ENST00000597029 CCDC180Q9P1Z9 1646 aa30.96■■■□□ 2.55
NUP62-211ENST00000597029 ZCCHC6Q5VYS8 1495 aaKnown RBP30.57■■■□□ 2.48
NUP62-211ENST00000597029 SHROOM4Q9ULL8 1493 aa30.34■■■□□ 2.45
NUP62-211ENST00000597029 DCAF1Q9Y4B6 1507 aa29.85■■■□□ 2.37
NUP62-211ENST00000597029 SUPT5HO00267 1087 aaKnown RBP29.73■■■□□ 2.35
NUP62-211ENST00000597029 DCAF8L2P0C7V8 631 aa29.7■■■□□ 2.34
NUP62-211ENST00000597029 MYO15BQ96JP2 1530 aa29.1■■■□□ 2.25
NUP62-211ENST00000597029 CHIC1Q5VXU3 224 aa28.98■■■□□ 2.23
NUP62-211ENST00000597029 ABCC9O60706 1549 aa28.78■■■□□ 2.2
NUP62-211ENST00000597029 SCRIBQ14160 1630 aa28.72■■■□□ 2.19
NUP62-211ENST00000597029 NACADO15069 1562 aa28.64■■■□□ 2.17
NUP62-211ENST00000597029 RSF1Q96T23 1441 aaPredicted RBP28.5■■■□□ 2.15
NUP62-211ENST00000597029 RB1CC1Q8TDY2 1594 aa28.22■■■□□ 2.11
NUP62-211ENST00000597029 CECR2Q9BXF3 1484 aa28.09■■■□□ 2.09
NUP62-211ENST00000597029 MROH2BQ7Z745 1585 aa28.02■■■□□ 2.08
NUP62-211ENST00000597029 LOC105371045A0A1W2PR82 267 aa27.98■■■□□ 2.07
NUP62-211ENST00000597029 WIZO95785 1651 aa27.85■■■□□ 2.05
NUP62-211ENST00000597029 TRIM41Q8WV44 630 aa27.84■■■□□ 2.05
NUP62-211ENST00000597029 BAZ1AQ9NRL2 1556 aaPredicted RBP27.82■■■□□ 2.04
NUP62-211ENST00000597029 HRCP23327 699 aa27.77■■■□□ 2.04
NUP62-211ENST00000597029 PCGF6Q9BYE7 350 aa27.77■■■□□ 2.04
NUP62-211ENST00000597029 UNC13AQ9UPW8 1703 aa27.7■■■□□ 2.02
NUP62-211ENST00000597029 SMARCA4P51532 1647 aa27.57■■■□□ 2
NUP62-211ENST00000597029 TOP2AP11388 1531 aaKnown RBP27.51■■□□□ 1.99
NUP62-211ENST00000597029 EIF4G1Q04637 1599 aaKnown RBP27.49■■□□□ 1.99
NUP62-211ENST00000597029 TRIM26Q12899 539 aaPredicted RBP27.46■■□□□ 1.99
NUP62-211ENST00000597029 FAM9AQ8IZU1 332 aaPredicted RBP27.4■■□□□ 1.98
NUP62-211ENST00000597029 BICRAQ9NZM4 1560 aa27.35■■□□□ 1.97
NUP62-211ENST00000597029 CCDC88BA6NC98 1476 aa27.33■■□□□ 1.97
NUP62-211ENST00000597029 SMARCA2P51531 1590 aa27.32■■□□□ 1.96
NUP62-211ENST00000597029 PEG3Q9GZU2 1588 aa27.17■■□□□ 1.94
NUP62-211ENST00000597029 PABPN1Q86U42 306 aaKnown RBP eCLIP27.17■■□□□ 1.94
NUP62-211ENST00000597029 ABCC8Q09428 1581 aa27.09■■□□□ 1.93
NUP62-211ENST00000597029 EHMT2Q96KQ7 1210 aa27.02■■□□□ 1.92
NUP62-211ENST00000597029 PPARGC1BQ86YN6 1023 aaKnown RBP27■■□□□ 1.91
NUP62-211ENST00000597029 ATAD2BQ9ULI0 1458 aa26.89■■□□□ 1.9
NUP62-211ENST00000597029 EEA1Q15075 1411 aa26.88■■□□□ 1.89
NUP62-211ENST00000597029 ZEB1P37275 1124 aaPredicted RBP26.86■■□□□ 1.89
NUP62-211ENST00000597029 SOGA1O94964 1423 aa26.82■■□□□ 1.88
NUP62-211ENST00000597029 BAZ1BQ9UIG0 1483 aaKnown RBP26.78■■□□□ 1.88
NUP62-211ENST00000597029 WRNQ14191 1432 aaPredicted RBP eCLIP26.77■■□□□ 1.88
NUP62-211ENST00000597029 CSRNP3Q8WYN3 585 aa26.74■■□□□ 1.87
NUP62-211ENST00000597029 TNIKQ9UKE5 1360 aa26.73■■□□□ 1.87
NUP62-211ENST00000597029 RUSC2Q8N2Y8 1516 aa26.67■■□□□ 1.86
NUP62-211ENST00000597029 CEP162Q5TB80 1403 aa26.66■■□□□ 1.86
NUP62-211ENST00000597029 SYNJ1O43426 1573 aa26.61■■□□□ 1.85
NUP62-211ENST00000597029 GOLGA3Q08378 1498 aa26.58■■□□□ 1.85
NUP62-211ENST00000597029 UBTFP17480 764 aaKnown RBP26.5■■□□□ 1.83
NUP62-211ENST00000597029 KIF21BO75037 1637 aa26.48■■□□□ 1.83
NUP62-211ENST00000597029 NCAPD3P42695 1498 aa26.48■■□□□ 1.83
NUP62-211ENST00000597029 HMGXB3Q12766 1538 aa26.47■■□□□ 1.83
NUP62-211ENST00000597029 CEP164Q9UPV0 1460 aa26.47■■□□□ 1.83
NUP62-211ENST00000597029 TOP2BQ02880 1626 aa26.41■■□□□ 1.82
NUP62-211ENST00000597029 BIVM-ERCC5R4GMW8 1640 aa26.33■■□□□ 1.81
NUP62-211ENST00000597029 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.23■■□□□ 1.79
NUP62-211ENST00000597029 CLIP1P30622 1438 aa26.22■■□□□ 1.79
NUP62-211ENST00000597029 CCER1Q8TC90 406 aaPredicted RBP26.21■■□□□ 1.79
NUP62-211ENST00000597029 RAPGEF2Q9Y4G8 1499 aa26.21■■□□□ 1.79
NUP62-211ENST00000597029 CFTRP13569 1480 aa26.19■■□□□ 1.78
NUP62-211ENST00000597029 VPS8Q8N3P4 1428 aa26.13■■□□□ 1.77
NUP62-211ENST00000597029 TTBK1Q5TCY1 1321 aaPredicted RBP26.12■■□□□ 1.77
NUP62-211ENST00000597029 CUX1P39880 1505 aa26.11■■□□□ 1.77
NUP62-211ENST00000597029 ERICH3Q5RHP9 1530 aa26.11■■□□□ 1.77
NUP62-211ENST00000597029 PRXQ9BXM0 1461 aa26.09■■□□□ 1.77
NUP62-211ENST00000597029 PRDM2Q13029 1718 aa26.04■■□□□ 1.76
NUP62-211ENST00000597029 KIF27Q86VH2 1401 aa25.99■■□□□ 1.75
NUP62-211ENST00000597029 APLP2Q06481 763 aa25.94■■□□□ 1.74
NUP62-211ENST00000597029 CADPSQ9ULU8 1353 aa25.9■■□□□ 1.74
NUP62-211ENST00000597029 ARAP1Q96P48 1450 aa25.82■■□□□ 1.72
NUP62-211ENST00000597029 RANGAP1P46060 587 aaPredicted RBP25.8■■□□□ 1.72
NUP62-211ENST00000597029 CC2D2AQ9P2K1 1620 aa25.79■■□□□ 1.72
NUP62-211ENST00000597029 HNRNPUL2Q1KMD3 747 aaKnown RBP25.73■■□□□ 1.71
NUP62-211ENST00000597029 IGF1RP08069 1367 aa25.71■■□□□ 1.71
NUP62-211ENST00000597029 CUX2O14529 1486 aa25.7■■□□□ 1.7
NUP62-211ENST00000597029 FGD5Q6ZNL6 1462 aa25.66■■□□□ 1.7
NUP62-211ENST00000597029 ARHGAP35Q9NRY4 1499 aa25.64■■□□□ 1.7
NUP62-211ENST00000597029 DIEXFQ68CQ4 756 aaKnown RBP25.62■■□□□ 1.69
NUP62-211ENST00000597029 FANCD2Q9BXW9 1451 aa25.6■■□□□ 1.69
NUP62-211ENST00000597029 CARMIL1Q5VZK9 1371 aa25.58■■□□□ 1.69
NUP62-211ENST00000597029 KANK4Q5T7N3 995 aaPredicted RBP25.58■■□□□ 1.69
NUP62-211ENST00000597029 ZNF316A6NFI3 1004 aaPredicted RBP25.54■■□□□ 1.68
NUP62-211ENST00000597029 RRBP1Q9P2E9 1410 aaKnown RBP25.53■■□□□ 1.68
NUP62-211ENST00000597029 DNMBPQ6XZF7 1577 aa25.51■■□□□ 1.67
NUP62-211ENST00000597029 CLSPNQ9HAW4 1339 aa25.48■■□□□ 1.67
NUP62-211ENST00000597029 MAP3K1Q13233 1512 aa25.48■■□□□ 1.67
NUP62-211ENST00000597029 ABCA10Q8WWZ4 1543 aa25.45■■□□□ 1.66
NUP62-211ENST00000597029 TOPBP1Q92547 1522 aa25.43■■□□□ 1.66
NUP62-211ENST00000597029 POLA1P09884 1462 aaPredicted RBP25.4■■□□□ 1.66
NUP62-211ENST00000597029 CCNB3Q8WWL7 1395 aa25.38■■□□□ 1.65
NUP62-211ENST00000597029 NESP48681 1621 aa25.37■■□□□ 1.65
NUP62-211ENST00000597029 TIAM1Q13009 1591 aa25.37■■□□□ 1.65
NUP62-211ENST00000597029 LAMC3Q9Y6N6 1575 aa25.37■■□□□ 1.65
NUP62-211ENST00000597029 DHX57Q6P158 1386 aaKnown RBP25.36■■□□□ 1.65
NUP62-211ENST00000597029 RAD54L2Q9Y4B4 1467 aa25.36■■□□□ 1.65
NUP62-211ENST00000597029 SCAF1Q9H7N4 1312 aaKnown RBP25.35■■□□□ 1.65
NUP62-211ENST00000597029 FHAD1B1AJZ9 1412 aa25.33■■□□□ 1.65
NUP62-211ENST00000597029 CUL7Q14999 1698 aa25.32■■□□□ 1.64
NUP62-211ENST00000597029 ACIN1Q9UKV3 1341 aaKnown RBP25.28■■□□□ 1.64
NUP62-211ENST00000597029 LRRC9Q6ZRR7 1453 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms