RNA–Protein interactions for RNA: ENST00000596437.5

NUP62-209, Transcript of nucleoporin 62, humanhuman

TSL 4

Gene NUP62, Length 894 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP62-209ENST00000596437 NISCHQ9Y2I1 1504 aa29.98■■■□□ 2.39
NUP62-209ENST00000596437 ABCC9O60706 1549 aa26.96■■□□□ 1.91
NUP62-209ENST00000596437 CCDC180Q9P1Z9 1646 aa26.9■■□□□ 1.9
NUP62-209ENST00000596437 RB1CC1Q8TDY2 1594 aa25.6■■□□□ 1.69
NUP62-209ENST00000596437 NACADO15069 1562 aa25.4■■□□□ 1.66
NUP62-209ENST00000596437 DCAF8L2P0C7V8 631 aa25.34■■□□□ 1.65
NUP62-209ENST00000596437 DNAJC5BQ9UF47 199 aa25.32■■□□□ 1.64
NUP62-209ENST00000596437 UNC13AQ9UPW8 1703 aa25.16■■□□□ 1.62
NUP62-209ENST00000596437 PABPN1Q86U42 306 aaKnown RBP eCLIP25.1■■□□□ 1.61
NUP62-209ENST00000596437 MYO15BQ96JP2 1530 aa25■■□□□ 1.59
NUP62-209ENST00000596437 BICRAQ9NZM4 1560 aa24.93■■□□□ 1.58
NUP62-209ENST00000596437 ZCCHC6Q5VYS8 1495 aaKnown RBP24.85■■□□□ 1.57
NUP62-209ENST00000596437 DCAF1Q9Y4B6 1507 aa24.71■■□□□ 1.55
NUP62-209ENST00000596437 SCRIBQ14160 1630 aa24.59■■□□□ 1.53
NUP62-209ENST00000596437 SHROOM4Q9ULL8 1493 aa24.43■■□□□ 1.5
NUP62-209ENST00000596437 CC2D2AQ9P2K1 1620 aa24.35■■□□□ 1.49
NUP62-209ENST00000596437 EIF4G1Q04637 1599 aaKnown RBP24.29■■□□□ 1.48
NUP62-209ENST00000596437 CECR2Q9BXF3 1484 aa24.25■■□□□ 1.47
NUP62-209ENST00000596437 NCAPD3P42695 1498 aa23.44■■□□□ 1.34
NUP62-209ENST00000596437 SMARCA4P51532 1647 aa23.42■■□□□ 1.34
NUP62-209ENST00000596437 ATAD2BQ9ULI0 1458 aa23.41■■□□□ 1.34
NUP62-209ENST00000596437 SMARCA2P51531 1590 aa23.31■■□□□ 1.32
NUP62-209ENST00000596437 HMGXB3Q12766 1538 aa23.28■■□□□ 1.32
NUP62-209ENST00000596437 BAZ1AQ9NRL2 1556 aaPredicted RBP23.25■■□□□ 1.31
NUP62-209ENST00000596437 ERCC6Q03468 1493 aa23.23■■□□□ 1.31
NUP62-209ENST00000596437 NESP48681 1621 aa23.19■■□□□ 1.3
NUP62-209ENST00000596437 BAZ1BQ9UIG0 1483 aaKnown RBP23.17■■□□□ 1.3
NUP62-209ENST00000596437 DNAJC5Q9H3Z4 198 aa23.16■■□□□ 1.3
NUP62-209ENST00000596437 MROH2BQ7Z745 1585 aa23.15■■□□□ 1.3
NUP62-209ENST00000596437 CUX2O14529 1486 aa23.15■■□□□ 1.3
NUP62-209ENST00000596437 PEG3Q9GZU2 1588 aa23.14■■□□□ 1.3
NUP62-209ENST00000596437 LAMC3Q9Y6N6 1575 aa22.94■■□□□ 1.26
NUP62-209ENST00000596437 THOC2Q8NI27 1593 aaKnown RBP22.93■■□□□ 1.26
NUP62-209ENST00000596437 WIZO95785 1651 aa22.91■■□□□ 1.26
NUP62-209ENST00000596437 KIF21AQ7Z4S6 1674 aa22.91■■□□□ 1.26
NUP62-209ENST00000596437 PDS5BQ9NTI5 1447 aa22.76■■□□□ 1.23
NUP62-209ENST00000596437 CADPSQ9ULU8 1353 aa22.74■■□□□ 1.23
NUP62-209ENST00000596437 RSF1Q96T23 1441 aaPredicted RBP22.63■■□□□ 1.21
NUP62-209ENST00000596437 MRC2Q9UBG0 1479 aa22.61■■□□□ 1.21
NUP62-209ENST00000596437 WDR62O43379 1518 aa22.57■■□□□ 1.2
NUP62-209ENST00000596437 TOP2AP11388 1531 aaKnown RBP22.54■■□□□ 1.2
NUP62-209ENST00000596437 CEP164Q9UPV0 1460 aa22.53■■□□□ 1.2
NUP62-209ENST00000596437 FANCD2Q9BXW9 1451 aa22.51■■□□□ 1.19
NUP62-209ENST00000596437 CFTRP13569 1480 aa22.49■■□□□ 1.19
NUP62-209ENST00000596437 URB2Q14146 1524 aaKnown RBP22.36■■□□□ 1.17
NUP62-209ENST00000596437 PRDM2Q13029 1718 aa22.34■■□□□ 1.17
NUP62-209ENST00000596437 CCDC88BA6NC98 1476 aa22.3■■□□□ 1.16
NUP62-209ENST00000596437 TRIM41Q8WV44 630 aa22.21■■□□□ 1.15
NUP62-209ENST00000596437 ZNF608Q9ULD9 1512 aaPredicted RBP22.11■■□□□ 1.13
NUP62-209ENST00000596437 TOPBP1Q92547 1522 aa22.1■■□□□ 1.13
NUP62-209ENST00000596437 OSCARQ8IYS5 282 aa22.09■■□□□ 1.13
NUP62-209ENST00000596437 IFT140Q96RY7 1462 aa22.05■■□□□ 1.12
NUP62-209ENST00000596437 DNMBPQ6XZF7 1577 aa22.01■■□□□ 1.11
NUP62-209ENST00000596437 EIF4G3O43432 1585 aaKnown RBP21.98■■□□□ 1.11
NUP62-209ENST00000596437 ABCC8Q09428 1581 aa21.96■■□□□ 1.11
NUP62-209ENST00000596437 TARBP1Q13395 1621 aaKnown RBP21.93■■□□□ 1.1
NUP62-209ENST00000596437 RIMBP3CA6NJZ7 1639 aa21.91■■□□□ 1.1
NUP62-209ENST00000596437 RIMBP3BA6NNM3 1639 aa21.91■■□□□ 1.1
NUP62-209ENST00000596437 RIMBP3Q9UFD9 1639 aa21.91■■□□□ 1.1
NUP62-209ENST00000596437 AQRO60306 1485 aaKnown RBP eCLIP21.89■■□□□ 1.091e-7■■■□□ 18.3
NUP62-209ENST00000596437 POLA1P09884 1462 aaPredicted RBP21.87■■□□□ 1.09
NUP62-209ENST00000596437 CHD1O14646 1710 aa21.86■■□□□ 1.09
NUP62-209ENST00000596437 RAD54L2Q9Y4B4 1467 aa21.83■■□□□ 1.09
NUP62-209ENST00000596437 ARHGEF11O15085 1522 aa21.8■■□□□ 1.08
NUP62-209ENST00000596437 FGD5Q6ZNL6 1462 aa21.75■■□□□ 1.07
NUP62-209ENST00000596437 SOGA1O94964 1423 aa21.74■■□□□ 1.07
NUP62-209ENST00000596437 CUX1P39880 1505 aa21.74■■□□□ 1.07
NUP62-209ENST00000596437 TDRD9Q8NDG6 1382 aaKnown RBP21.74■■□□□ 1.07
NUP62-209ENST00000596437 FBLN2P98095 1184 aa21.72■■□□□ 1.07
NUP62-209ENST00000596437 SNAPC4Q5SXM2 1469 aa21.65■■□□□ 1.06
NUP62-209ENST00000596437 SUPT5HO00267 1087 aaKnown RBP21.65■■□□□ 1.06
NUP62-209ENST00000596437 WDR97A6NE52 1622 aa21.63■■□□□ 1.05
NUP62-209ENST00000596437 CYB5RLQ6IPT4 315 aa21.62■■□□□ 1.05
NUP62-209ENST00000596437 ARAP1Q96P48 1450 aa21.59■■□□□ 1.05
NUP62-209ENST00000596437 PBRM1Q86U86 1689 aa21.56■■□□□ 1.04
NUP62-209ENST00000596437 CLASP1Q7Z460 1538 aa21.55■■□□□ 1.04
NUP62-209ENST00000596437 GRIN2BQ13224 1484 aa21.54■■□□□ 1.04
NUP62-209ENST00000596437 MAGI1Q96QZ7 1491 aaPredicted RBP21.53■■□□□ 1.04
NUP62-209ENST00000596437 CHMP7Q8WUX9 453 aaPredicted RBP21.51■■□□□ 1.03
NUP62-209ENST00000596437 SYNJ1O43426 1573 aa21.49■■□□□ 1.03
NUP62-209ENST00000596437 GAPVD1Q14C86 1478 aa21.49■■□□□ 1.03
NUP62-209ENST00000596437 SYNJ2O15056 1496 aa21.48■■□□□ 1.03
NUP62-209ENST00000596437 ABCA5Q8WWZ7 1642 aa21.47■■□□□ 1.03
NUP62-209ENST00000596437 ABCA10Q8WWZ4 1543 aa21.46■■□□□ 1.03
NUP62-209ENST00000596437 BIVM-ERCC5R4GMW8 1640 aa21.39■■□□□ 1.01
NUP62-209ENST00000596437 TRHP20396 242 aaPredicted RBP21.38■■□□□ 1.01
NUP62-209ENST00000596437 TOP2BQ02880 1626 aa21.37■■□□□ 1.01
NUP62-209ENST00000596437 WRNQ14191 1432 aaPredicted RBP eCLIP21.34■■□□□ 1.01
NUP62-209ENST00000596437 ADAMTS12P58397 1594 aa21.31■■□□□ 1
NUP62-209ENST00000596437 GRIN2AQ12879 1464 aa21.29■■□□□ 1
NUP62-209ENST00000596437 ERCC6L2Q5T890 1561 aa21.28■■□□□ 1
NUP62-209ENST00000596437 CEP170Q5SW79 1584 aa21.27■□□□□ 0.99
NUP62-209ENST00000596437 NUP160Q12769 1436 aa21.21■□□□□ 0.99
NUP62-209ENST00000596437 FHAD1B1AJZ9 1412 aa21.19■□□□□ 0.98
NUP62-209ENST00000596437 ERICH3Q5RHP9 1530 aa21.18■□□□□ 0.98
NUP62-209ENST00000596437 SHROOM2Q13796 1616 aa21.15■□□□□ 0.98
NUP62-209ENST00000596437 RUSC2Q8N2Y8 1516 aa21.02■□□□□ 0.96
NUP62-209ENST00000596437 PRG4Q92954 1404 aaPredicted RBP21.02■□□□□ 0.96
NUP62-209ENST00000596437 JPH4Q96JJ6 628 aa20.98■□□□□ 0.95
NUP62-209ENST00000596437 KIF13AQ9H1H9 1805 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms