RNA–Protein interactions for RNA: ENST00000555617.5

ABCD4-222, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-222ENST00000555617 NISCHQ9Y2I1 1504 aa31.02■■■□□ 2.56
ABCD4-222ENST00000555617 ABCC9O60706 1549 aa30.54■■■□□ 2.48
ABCD4-222ENST00000555617 DNAJC5BQ9UF47 199 aa30.44■■■□□ 2.46
ABCD4-222ENST00000555617 DNAJC5Q9H3Z4 198 aa29.09■■■□□ 2.25
ABCD4-222ENST00000555617 CCDC180Q9P1Z9 1646 aa28.62■■■□□ 2.17
ABCD4-222ENST00000555617 PABPN1Q86U42 306 aaKnown RBP eCLIP28.12■■■□□ 2.09
ABCD4-222ENST00000555617 RB1CC1Q8TDY2 1594 aa28.1■■■□□ 2.09
ABCD4-222ENST00000555617 UNC13AQ9UPW8 1703 aa27.77■■■□□ 2.04
ABCD4-222ENST00000555617 CECR2Q9BXF3 1484 aa27.64■■■□□ 2.01
ABCD4-222ENST00000555617 BICRAQ9NZM4 1560 aa27.6■■■□□ 2.01
ABCD4-222ENST00000555617 CC2D2AQ9P2K1 1620 aa27.5■■□□□ 1.99
ABCD4-222ENST00000555617 NACADO15069 1562 aa27.43■■□□□ 1.98
ABCD4-222ENST00000555617 TRIM41Q8WV44 630 aa27.06■■□□□ 1.92
ABCD4-222ENST00000555617 EIF4G1Q04637 1599 aaKnown RBP26.95■■□□□ 1.9
ABCD4-222ENST00000555617 CUX2O14529 1486 aa26.93■■□□□ 1.9
ABCD4-222ENST00000555617 DCAF8L2P0C7V8 631 aa26.85■■□□□ 1.89
ABCD4-222ENST00000555617 SHROOM4Q9ULL8 1493 aa26.68■■□□□ 1.86
ABCD4-222ENST00000555617 MYO15BQ96JP2 1530 aa26.39■■□□□ 1.81
ABCD4-222ENST00000555617 ERCC6Q03468 1493 aa26.34■■□□□ 1.81
ABCD4-222ENST00000555617 SCRIBQ14160 1630 aa26.08■■□□□ 1.77
ABCD4-222ENST00000555617 THOC2Q8NI27 1593 aaKnown RBP25.88■■□□□ 1.73
ABCD4-222ENST00000555617 NESP48681 1621 aa25.79■■□□□ 1.72
ABCD4-222ENST00000555617 AEBP2Q6ZN18 517 aaPredicted RBP25.74■■□□□ 1.71
ABCD4-222ENST00000555617 SMARCA2P51531 1590 aa25.5■■□□□ 1.67
ABCD4-222ENST00000555617 BAZ1AQ9NRL2 1556 aaPredicted RBP25.5■■□□□ 1.67
ABCD4-222ENST00000555617 RIMBP3CA6NJZ7 1639 aa25.45■■□□□ 1.67
ABCD4-222ENST00000555617 RIMBP3BA6NNM3 1639 aa25.45■■□□□ 1.67
ABCD4-222ENST00000555617 RIMBP3Q9UFD9 1639 aa25.45■■□□□ 1.67
ABCD4-222ENST00000555617 DCAF1Q9Y4B6 1507 aa25.41■■□□□ 1.66
ABCD4-222ENST00000555617 KIF21AQ7Z4S6 1674 aa25.39■■□□□ 1.66
ABCD4-222ENST00000555617 NCAPD3P42695 1498 aa25.38■■□□□ 1.65
ABCD4-222ENST00000555617 ZCCHC6Q5VYS8 1495 aaKnown RBP25.34■■□□□ 1.65
ABCD4-222ENST00000555617 OSCARQ8IYS5 282 aa25.3■■□□□ 1.64
ABCD4-222ENST00000555617 ILDR1Q86SU0 546 aaPredicted RBP25.27■■□□□ 1.64
ABCD4-222ENST00000555617 TRHP20396 242 aaPredicted RBP25.19■■□□□ 1.62
ABCD4-222ENST00000555617 ARHGEF11O15085 1522 aa25.12■■□□□ 1.61
ABCD4-222ENST00000555617 ATAD2BQ9ULI0 1458 aa25.1■■□□□ 1.61
ABCD4-222ENST00000555617 LAMC3Q9Y6N6 1575 aa25.1■■□□□ 1.61
ABCD4-222ENST00000555617 HMGXB3Q12766 1538 aa25.04■■□□□ 1.6
ABCD4-222ENST00000555617 WDR62O43379 1518 aa25■■□□□ 1.59
ABCD4-222ENST00000555617 CYB5RLQ6IPT4 315 aa24.94■■□□□ 1.58
ABCD4-222ENST00000555617 MRC2Q9UBG0 1479 aa24.94■■□□□ 1.58
ABCD4-222ENST00000555617 PDS5BQ9NTI5 1447 aa24.91■■□□□ 1.58
ABCD4-222ENST00000555617 ARAP1Q96P48 1450 aa24.79■■□□□ 1.56
ABCD4-222ENST00000555617 BAZ1BQ9UIG0 1483 aaKnown RBP24.69■■□□□ 1.54
ABCD4-222ENST00000555617 SMARCA4P51532 1647 aa24.64■■□□□ 1.54
ABCD4-222ENST00000555617 CADPSQ9ULU8 1353 aa24.49■■□□□ 1.51
ABCD4-222ENST00000555617 CEP164Q9UPV0 1460 aa24.44■■□□□ 1.5
ABCD4-222ENST00000555617 PEG3Q9GZU2 1588 aa24.37■■□□□ 1.49
ABCD4-222ENST00000555617 ZNF608Q9ULD9 1512 aaPredicted RBP24.35■■□□□ 1.49
ABCD4-222ENST00000555617 URB2Q14146 1524 aaKnown RBP24.31■■□□□ 1.48
ABCD4-222ENST00000555617 CHD1O14646 1710 aa24.31■■□□□ 1.48
ABCD4-222ENST00000555617 FANCD2Q9BXW9 1451 aa24.28■■□□□ 1.48
ABCD4-222ENST00000555617 RSF1Q96T23 1441 aaPredicted RBP24.24■■□□□ 1.47
ABCD4-222ENST00000555617 KDM4FA0A1W2PPD8 638 aa24.14■■□□□ 1.45
ABCD4-222ENST00000555617 EIF4G3O43432 1585 aaKnown RBP24.08■■□□□ 1.44
ABCD4-222ENST00000555617 IFT140Q96RY7 1462 aa23.99■■□□□ 1.43
ABCD4-222ENST00000555617 MROH2BQ7Z745 1585 aa23.99■■□□□ 1.43
ABCD4-222ENST00000555617 CLASP1Q7Z460 1538 aa23.93■■□□□ 1.42
ABCD4-222ENST00000555617 KIF13AQ9H1H9 1805 aa23.87■■□□□ 1.41
ABCD4-222ENST00000555617 FBLN2P98095 1184 aa23.87■■□□□ 1.41
ABCD4-222ENST00000555617 CFTRP13569 1480 aa23.87■■□□□ 1.41
ABCD4-222ENST00000555617 ERCC6L2Q5T890 1561 aa23.82■■□□□ 1.4
ABCD4-222ENST00000555617 AQRO60306 1485 aaKnown RBP eCLIP23.81■■□□□ 1.47e-8■■■■■ 35.6
ABCD4-222ENST00000555617 HECW2Q9P2P5 1572 aa23.81■■□□□ 1.4
ABCD4-222ENST00000555617 LMTK3Q96Q04 1460 aa23.81■■□□□ 1.4
ABCD4-222ENST00000555617 FBXO41Q8TF61 875 aa23.77■■□□□ 1.4
ABCD4-222ENST00000555617 GAPVD1Q14C86 1478 aa23.74■■□□□ 1.39
ABCD4-222ENST00000555617 ILDR2Q71H61 639 aa23.68■■□□□ 1.38
ABCD4-222ENST00000555617 TARBP1Q13395 1621 aaKnown RBP23.66■■□□□ 1.38
ABCD4-222ENST00000555617 TOPBP1Q92547 1522 aa23.65■■□□□ 1.38
ABCD4-222ENST00000555617 SOCS7O14512 581 aa23.64■■□□□ 1.37
ABCD4-222ENST00000555617 WIZO95785 1651 aa23.64■■□□□ 1.37
ABCD4-222ENST00000555617 SYNJ1O43426 1573 aa23.58■■□□□ 1.37
ABCD4-222ENST00000555617 PRDM2Q13029 1718 aa23.56■■□□□ 1.36
ABCD4-222ENST00000555617 SNAPC4Q5SXM2 1469 aa23.5■■□□□ 1.35
ABCD4-222ENST00000555617 KDM6BO15054 1643 aa23.48■■□□□ 1.35
ABCD4-222ENST00000555617 ADGRL1O94910 1474 aa23.47■■□□□ 1.35
ABCD4-222ENST00000555617 SYNJ2O15056 1496 aa23.43■■□□□ 1.34
ABCD4-222ENST00000555617 DNMBPQ6XZF7 1577 aa23.36■■□□□ 1.33
ABCD4-222ENST00000555617 TDRD9Q8NDG6 1382 aaKnown RBP23.33■■□□□ 1.33
ABCD4-222ENST00000555617 CHMP7Q8WUX9 453 aaPredicted RBP23.32■■□□□ 1.32
ABCD4-222ENST00000555617 RAD54L2Q9Y4B4 1467 aa23.3■■□□□ 1.32
ABCD4-222ENST00000555617 POLA1P09884 1462 aaPredicted RBP23.3■■□□□ 1.32
ABCD4-222ENST00000555617 ABCC10Q5T3U5 1492 aa23.28■■□□□ 1.32
ABCD4-222ENST00000555617 FAM69CQ0P6D2 419 aa23.27■■□□□ 1.32
ABCD4-222ENST00000555617 DIP2BQ9P265 1576 aa23.27■■□□□ 1.32
ABCD4-222ENST00000555617 TSPOAP1O95153 1857 aa23.26■■□□□ 1.31
ABCD4-222ENST00000555617 DISP3Q9P2K9 1392 aa23.26■■□□□ 1.31
ABCD4-222ENST00000555617 MAGI1Q96QZ7 1491 aaPredicted RBP23.24■■□□□ 1.31
ABCD4-222ENST00000555617 ABCC8Q09428 1581 aa23.23■■□□□ 1.31
ABCD4-222ENST00000555617 CEP170Q5SW79 1584 aa23.16■■□□□ 1.3
ABCD4-222ENST00000555617 TOP2AP11388 1531 aaKnown RBP23.08■■□□□ 1.28
ABCD4-222ENST00000555617 GRIN2BQ13224 1484 aa23.06■■□□□ 1.28
ABCD4-222ENST00000555617 WDR97A6NE52 1622 aa23.05■■□□□ 1.28
ABCD4-222ENST00000555617 MAPKBP1O60336 1514 aa23.05■■□□□ 1.28
ABCD4-222ENST00000555617 SOGA1O94964 1423 aa23.05■■□□□ 1.28
ABCD4-222ENST00000555617 SHROOM2Q13796 1616 aa23.01■■□□□ 1.27
ABCD4-222ENST00000555617 PBRM1Q86U86 1689 aa23.01■■□□□ 1.27
ABCD4-222ENST00000555617 SPATA31D1Q6ZQQ2 1576 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms