RNA–Protein interactions for RNA: ENST00000582166.1

ACADVL-228, Transcript of acyl-CoA dehydrogenase very long chain, humanhuman

TSL 4

Gene ACADVL, Length 550 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACADVL-228ENST00000582166 NISCHQ9Y2I1 1504 aa29.04■■■□□ 2.24
ACADVL-228ENST00000582166 ABCC9O60706 1549 aa26.17■■□□□ 1.78
ACADVL-228ENST00000582166 CCDC180Q9P1Z9 1646 aa26.1■■□□□ 1.77
ACADVL-228ENST00000582166 RB1CC1Q8TDY2 1594 aa24.84■■□□□ 1.57
ACADVL-228ENST00000582166 DCAF8L2P0C7V8 631 aa24.7■■□□□ 1.54
ACADVL-228ENST00000582166 NACADO15069 1562 aa24.6■■□□□ 1.53
ACADVL-228ENST00000582166 DNAJC5BQ9UF47 199 aa24.49■■□□□ 1.51
ACADVL-228ENST00000582166 UNC13AQ9UPW8 1703 aa24.46■■□□□ 1.51
ACADVL-228ENST00000582166 PABPN1Q86U42 306 aaKnown RBP eCLIP24.37■■□□□ 1.491e-8■■■■■ 33.4
ACADVL-228ENST00000582166 MYO15BQ96JP2 1530 aa24.15■■□□□ 1.46
ACADVL-228ENST00000582166 BICRAQ9NZM4 1560 aa24.12■■□□□ 1.45
ACADVL-228ENST00000582166 ZCCHC6Q5VYS8 1495 aaKnown RBP24.05■■□□□ 1.44
ACADVL-228ENST00000582166 SCRIBQ14160 1630 aa23.9■■□□□ 1.42
ACADVL-228ENST00000582166 DCAF1Q9Y4B6 1507 aa23.87■■□□□ 1.41
ACADVL-228ENST00000582166 CC2D2AQ9P2K1 1620 aa23.62■■□□□ 1.37
ACADVL-228ENST00000582166 SHROOM4Q9ULL8 1493 aa23.6■■□□□ 1.37
ACADVL-228ENST00000582166 EIF4G1Q04637 1599 aaKnown RBP23.52■■□□□ 1.36
ACADVL-228ENST00000582166 CECR2Q9BXF3 1484 aa23.5■■□□□ 1.35
ACADVL-228ENST00000582166 SMARCA4P51532 1647 aa22.71■■□□□ 1.23
ACADVL-228ENST00000582166 NCAPD3P42695 1498 aa22.66■■□□□ 1.22
ACADVL-228ENST00000582166 ATAD2BQ9ULI0 1458 aa22.66■■□□□ 1.22
ACADVL-228ENST00000582166 SMARCA2P51531 1590 aa22.61■■□□□ 1.21
ACADVL-228ENST00000582166 ERCC6Q03468 1493 aa22.58■■□□□ 1.2
ACADVL-228ENST00000582166 HMGXB3Q12766 1538 aa22.55■■□□□ 1.2
ACADVL-228ENST00000582166 BAZ1AQ9NRL2 1556 aaPredicted RBP22.55■■□□□ 1.2
ACADVL-228ENST00000582166 BAZ1BQ9UIG0 1483 aaKnown RBP22.49■■□□□ 1.19
ACADVL-228ENST00000582166 NESP48681 1621 aa22.49■■□□□ 1.19
ACADVL-228ENST00000582166 MROH2BQ7Z745 1585 aa22.43■■□□□ 1.18
ACADVL-228ENST00000582166 DNAJC5Q9H3Z4 198 aa22.41■■□□□ 1.18
ACADVL-228ENST00000582166 CUX2O14529 1486 aa22.41■■□□□ 1.18
ACADVL-228ENST00000582166 PEG3Q9GZU2 1588 aa22.38■■□□□ 1.17
ACADVL-228ENST00000582166 KIF21AQ7Z4S6 1674 aa22.28■■□□□ 1.16
ACADVL-228ENST00000582166 WIZO95785 1651 aa22.26■■□□□ 1.15
ACADVL-228ENST00000582166 LAMC3Q9Y6N6 1575 aa22.24■■□□□ 1.15
ACADVL-228ENST00000582166 THOC2Q8NI27 1593 aaKnown RBP22.22■■□□□ 1.15
ACADVL-228ENST00000582166 PDS5BQ9NTI5 1447 aa22.07■■□□□ 1.12
ACADVL-228ENST00000582166 CADPSQ9ULU8 1353 aa22.01■■□□□ 1.11
ACADVL-228ENST00000582166 MRC2Q9UBG0 1479 aa21.92■■□□□ 1.1
ACADVL-228ENST00000582166 RSF1Q96T23 1441 aaPredicted RBP21.91■■□□□ 1.1
ACADVL-228ENST00000582166 WDR62O43379 1518 aa21.85■■□□□ 1.09
ACADVL-228ENST00000582166 CEP164Q9UPV0 1460 aa21.85■■□□□ 1.09
ACADVL-228ENST00000582166 TOP2AP11388 1531 aaKnown RBP21.85■■□□□ 1.09
ACADVL-228ENST00000582166 FANCD2Q9BXW9 1451 aa21.83■■□□□ 1.09
ACADVL-228ENST00000582166 CFTRP13569 1480 aa21.76■■□□□ 1.07
ACADVL-228ENST00000582166 PRDM2Q13029 1718 aa21.75■■□□□ 1.07
ACADVL-228ENST00000582166 URB2Q14146 1524 aaKnown RBP21.66■■□□□ 1.06
ACADVL-228ENST00000582166 TRIM41Q8WV44 630 aa21.62■■□□□ 1.05
ACADVL-228ENST00000582166 CCDC88BA6NC98 1476 aa21.62■■□□□ 1.05
ACADVL-228ENST00000582166 OSCARQ8IYS5 282 aa21.43■■□□□ 1.02
ACADVL-228ENST00000582166 TOPBP1Q92547 1522 aa21.42■■□□□ 1.02
ACADVL-228ENST00000582166 ZNF608Q9ULD9 1512 aaPredicted RBP21.42■■□□□ 1.02
ACADVL-228ENST00000582166 IFT140Q96RY7 1462 aa21.37■■□□□ 1.01
ACADVL-228ENST00000582166 DNMBPQ6XZF7 1577 aa21.35■■□□□ 1.01
ACADVL-228ENST00000582166 EIF4G3O43432 1585 aaKnown RBP21.33■■□□□ 1.01
ACADVL-228ENST00000582166 ABCC8Q09428 1581 aa21.29■■□□□ 1
ACADVL-228ENST00000582166 CHD1O14646 1710 aa21.26■□□□□ 0.99
ACADVL-228ENST00000582166 RIMBP3CA6NJZ7 1639 aa21.26■□□□□ 0.99
ACADVL-228ENST00000582166 RIMBP3BA6NNM3 1639 aa21.26■□□□□ 0.99
ACADVL-228ENST00000582166 RIMBP3Q9UFD9 1639 aa21.26■□□□□ 0.99
ACADVL-228ENST00000582166 TARBP1Q13395 1621 aaKnown RBP21.26■□□□□ 0.99
ACADVL-228ENST00000582166 AQRO60306 1485 aaKnown RBP eCLIP21.22■□□□□ 0.991e-7■■■■□ 24.7
ACADVL-228ENST00000582166 POLA1P09884 1462 aaPredicted RBP21.19■□□□□ 0.98
ACADVL-228ENST00000582166 RAD54L2Q9Y4B4 1467 aa21.18■□□□□ 0.98
ACADVL-228ENST00000582166 FBLN2P98095 1184 aa21.16■□□□□ 0.98
ACADVL-228ENST00000582166 ARHGEF11O15085 1522 aa21.13■□□□□ 0.97
ACADVL-228ENST00000582166 SUPT5HO00267 1087 aaKnown RBP21.11■□□□□ 0.97
ACADVL-228ENST00000582166 SOGA1O94964 1423 aa21.1■□□□□ 0.97
ACADVL-228ENST00000582166 TDRD9Q8NDG6 1382 aaKnown RBP21.1■□□□□ 0.97
ACADVL-228ENST00000582166 FGD5Q6ZNL6 1462 aa21.09■□□□□ 0.97
ACADVL-228ENST00000582166 CUX1P39880 1505 aa21.08■□□□□ 0.96
ACADVL-228ENST00000582166 CYB5RLQ6IPT4 315 aa21.01■□□□□ 0.95
ACADVL-228ENST00000582166 SNAPC4Q5SXM2 1469 aa21.01■□□□□ 0.95
ACADVL-228ENST00000582166 WDR97A6NE52 1622 aa20.98■□□□□ 0.95
ACADVL-228ENST00000582166 PBRM1Q86U86 1689 aa20.98■□□□□ 0.95
ACADVL-228ENST00000582166 CHMP7Q8WUX9 453 aaPredicted RBP20.91■□□□□ 0.94
ACADVL-228ENST00000582166 ARAP1Q96P48 1450 aa20.91■□□□□ 0.94
ACADVL-228ENST00000582166 GRIN2BQ13224 1484 aa20.89■□□□□ 0.94
ACADVL-228ENST00000582166 MAGI1Q96QZ7 1491 aaPredicted RBP20.88■□□□□ 0.93
ACADVL-228ENST00000582166 SYNJ1O43426 1573 aa20.87■□□□□ 0.93
ACADVL-228ENST00000582166 CLASP1Q7Z460 1538 aa20.85■□□□□ 0.93
ACADVL-228ENST00000582166 GAPVD1Q14C86 1478 aa20.85■□□□□ 0.93
ACADVL-228ENST00000582166 TRHP20396 242 aaPredicted RBP20.83■□□□□ 0.93
ACADVL-228ENST00000582166 ABCA5Q8WWZ7 1642 aa20.82■□□□□ 0.92
ACADVL-228ENST00000582166 SYNJ2O15056 1496 aa20.81■□□□□ 0.92
ACADVL-228ENST00000582166 ABCA10Q8WWZ4 1543 aa20.78■□□□□ 0.92
ACADVL-228ENST00000582166 BIVM-ERCC5R4GMW8 1640 aa20.75■□□□□ 0.91
ACADVL-228ENST00000582166 TOP2BQ02880 1626 aa20.72■□□□□ 0.91
ACADVL-228ENST00000582166 WRNQ14191 1432 aaPredicted RBP eCLIP20.7■□□□□ 0.9
ACADVL-228ENST00000582166 ADAMTS12P58397 1594 aa20.67■□□□□ 0.9
ACADVL-228ENST00000582166 GRIN2AQ12879 1464 aa20.64■□□□□ 0.89
ACADVL-228ENST00000582166 ERCC6L2Q5T890 1561 aa20.63■□□□□ 0.89
ACADVL-228ENST00000582166 CEP170Q5SW79 1584 aa20.63■□□□□ 0.89
ACADVL-228ENST00000582166 FHAD1B1AJZ9 1412 aa20.53■□□□□ 0.88
ACADVL-228ENST00000582166 ERICH3Q5RHP9 1530 aa20.53■□□□□ 0.88
ACADVL-228ENST00000582166 NUP160Q12769 1436 aa20.51■□□□□ 0.87
ACADVL-228ENST00000582166 SHROOM2Q13796 1616 aa20.49■□□□□ 0.87
ACADVL-228ENST00000582166 PRG4Q92954 1404 aaPredicted RBP20.4■□□□□ 0.86
ACADVL-228ENST00000582166 RUSC2Q8N2Y8 1516 aa20.38■□□□□ 0.85
ACADVL-228ENST00000582166 JPH4Q96JJ6 628 aa20.35■□□□□ 0.85
ACADVL-228ENST00000582166 KIF13AQ9H1H9 1805 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms