RNA–Protein interactions for RNA: ENST00000599560.5

NUP62-216, Transcript of nucleoporin 62, humanhuman

TSL 2

Gene NUP62, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP62-216ENST00000599560 NISCHQ9Y2I1 1504 aa31.66■■■□□ 2.66
NUP62-216ENST00000599560 ABCC9O60706 1549 aa29.49■■■□□ 2.31
NUP62-216ENST00000599560 CCDC180Q9P1Z9 1646 aa28.7■■■□□ 2.19
NUP62-216ENST00000599560 DNAJC5BQ9UF47 199 aa28.41■■■□□ 2.14
NUP62-216ENST00000599560 RB1CC1Q8TDY2 1594 aa27.64■■■□□ 2.01
NUP62-216ENST00000599560 PABPN1Q86U42 306 aaKnown RBP eCLIP27.34■■□□□ 1.97
NUP62-216ENST00000599560 NACADO15069 1562 aa27.26■■□□□ 1.96
NUP62-216ENST00000599560 UNC13AQ9UPW8 1703 aa27.24■■□□□ 1.95
NUP62-216ENST00000599560 BICRAQ9NZM4 1560 aa27.02■■□□□ 1.92
NUP62-216ENST00000599560 DCAF8L2P0C7V8 631 aa27.01■■□□□ 1.91
NUP62-216ENST00000599560 MYO15BQ96JP2 1530 aa26.61■■□□□ 1.85
NUP62-216ENST00000599560 CC2D2AQ9P2K1 1620 aa26.61■■□□□ 1.85
NUP62-216ENST00000599560 CECR2Q9BXF3 1484 aa26.58■■□□□ 1.85
NUP62-216ENST00000599560 DNAJC5Q9H3Z4 198 aa26.45■■□□□ 1.82
NUP62-216ENST00000599560 EIF4G1Q04637 1599 aaKnown RBP26.33■■□□□ 1.81
NUP62-216ENST00000599560 SHROOM4Q9ULL8 1493 aa26.33■■□□□ 1.81
NUP62-216ENST00000599560 SCRIBQ14160 1630 aa26.2■■□□□ 1.78
NUP62-216ENST00000599560 ZCCHC6Q5VYS8 1495 aaKnown RBP26.1■■□□□ 1.77
NUP62-216ENST00000599560 DCAF1Q9Y4B6 1507 aa26.04■■□□□ 1.76
NUP62-216ENST00000599560 CUX2O14529 1486 aa25.59■■□□□ 1.69
NUP62-216ENST00000599560 ERCC6Q03468 1493 aa25.4■■□□□ 1.66
NUP62-216ENST00000599560 NCAPD3P42695 1498 aa25.21■■□□□ 1.63
NUP62-216ENST00000599560 NESP48681 1621 aa25.19■■□□□ 1.62
NUP62-216ENST00000599560 ATAD2BQ9ULI0 1458 aa25.07■■□□□ 1.6
NUP62-216ENST00000599560 THOC2Q8NI27 1593 aaKnown RBP25.04■■□□□ 1.6
NUP62-216ENST00000599560 TRIM41Q8WV44 630 aa25.02■■□□□ 1.6
NUP62-216ENST00000599560 HMGXB3Q12766 1538 aa24.95■■□□□ 1.58
NUP62-216ENST00000599560 SMARCA4P51532 1647 aa24.89■■□□□ 1.57
NUP62-216ENST00000599560 SMARCA2P51531 1590 aa24.88■■□□□ 1.57
NUP62-216ENST00000599560 KIF21AQ7Z4S6 1674 aa24.84■■□□□ 1.57
NUP62-216ENST00000599560 BAZ1BQ9UIG0 1483 aaKnown RBP24.74■■□□□ 1.55
NUP62-216ENST00000599560 LAMC3Q9Y6N6 1575 aa24.74■■□□□ 1.55
NUP62-216ENST00000599560 PEG3Q9GZU2 1588 aa24.61■■□□□ 1.53
NUP62-216ENST00000599560 BAZ1AQ9NRL2 1556 aaPredicted RBP24.57■■□□□ 1.52
NUP62-216ENST00000599560 PDS5BQ9NTI5 1447 aa24.56■■□□□ 1.52
NUP62-216ENST00000599560 MRC2Q9UBG0 1479 aa24.47■■□□□ 1.51
NUP62-216ENST00000599560 MROH2BQ7Z745 1585 aa24.46■■□□□ 1.51
NUP62-216ENST00000599560 WDR62O43379 1518 aa24.46■■□□□ 1.51
NUP62-216ENST00000599560 CADPSQ9ULU8 1353 aa24.39■■□□□ 1.49
NUP62-216ENST00000599560 OSCARQ8IYS5 282 aa24.28■■□□□ 1.48
NUP62-216ENST00000599560 CEP164Q9UPV0 1460 aa24.21■■□□□ 1.47
NUP62-216ENST00000599560 RIMBP3CA6NJZ7 1639 aa24.2■■□□□ 1.46
NUP62-216ENST00000599560 RIMBP3BA6NNM3 1639 aa24.2■■□□□ 1.46
NUP62-216ENST00000599560 RIMBP3Q9UFD9 1639 aa24.2■■□□□ 1.46
NUP62-216ENST00000599560 WIZO95785 1651 aa24.17■■□□□ 1.46
NUP62-216ENST00000599560 FANCD2Q9BXW9 1451 aa24.15■■□□□ 1.46
NUP62-216ENST00000599560 URB2Q14146 1524 aaKnown RBP24.07■■□□□ 1.44
NUP62-216ENST00000599560 ARHGEF11O15085 1522 aa24■■□□□ 1.43
NUP62-216ENST00000599560 CFTRP13569 1480 aa23.99■■□□□ 1.43
NUP62-216ENST00000599560 ZNF608Q9ULD9 1512 aaPredicted RBP23.91■■□□□ 1.42
NUP62-216ENST00000599560 CYB5RLQ6IPT4 315 aa23.84■■□□□ 1.41
NUP62-216ENST00000599560 TRHP20396 242 aaPredicted RBP23.76■■□□□ 1.39
NUP62-216ENST00000599560 PRDM2Q13029 1718 aa23.76■■□□□ 1.39
NUP62-216ENST00000599560 ARAP1Q96P48 1450 aa23.75■■□□□ 1.39
NUP62-216ENST00000599560 IFT140Q96RY7 1462 aa23.74■■□□□ 1.39
NUP62-216ENST00000599560 CHD1O14646 1710 aa23.73■■□□□ 1.39
NUP62-216ENST00000599560 EIF4G3O43432 1585 aaKnown RBP23.7■■□□□ 1.38
NUP62-216ENST00000599560 TOP2AP11388 1531 aaKnown RBP23.7■■□□□ 1.38
NUP62-216ENST00000599560 TOPBP1Q92547 1522 aa23.64■■□□□ 1.38
NUP62-216ENST00000599560 RSF1Q96T23 1441 aaPredicted RBP23.64■■□□□ 1.37
NUP62-216ENST00000599560 AQRO60306 1485 aaKnown RBP eCLIP23.56■■□□□ 1.361e-7■■■□□ 18.3
NUP62-216ENST00000599560 AEBP2Q6ZN18 517 aaPredicted RBP23.53■■□□□ 1.36
NUP62-216ENST00000599560 TARBP1Q13395 1621 aaKnown RBP23.52■■□□□ 1.36
NUP62-216ENST00000599560 CCDC88BA6NC98 1476 aa23.48■■□□□ 1.35
NUP62-216ENST00000599560 FBLN2P98095 1184 aa23.47■■□□□ 1.35
NUP62-216ENST00000599560 DNMBPQ6XZF7 1577 aa23.46■■□□□ 1.35
NUP62-216ENST00000599560 ABCC8Q09428 1581 aa23.39■■□□□ 1.33
NUP62-216ENST00000599560 CLASP1Q7Z460 1538 aa23.38■■□□□ 1.33
NUP62-216ENST00000599560 POLA1P09884 1462 aaPredicted RBP23.36■■□□□ 1.33
NUP62-216ENST00000599560 RAD54L2Q9Y4B4 1467 aa23.34■■□□□ 1.33
NUP62-216ENST00000599560 TDRD9Q8NDG6 1382 aaKnown RBP23.29■■□□□ 1.32
NUP62-216ENST00000599560 SNAPC4Q5SXM2 1469 aa23.27■■□□□ 1.32
NUP62-216ENST00000599560 SYNJ1O43426 1573 aa23.2■■□□□ 1.3
NUP62-216ENST00000599560 SOGA1O94964 1423 aa23.18■■□□□ 1.3
NUP62-216ENST00000599560 CHMP7Q8WUX9 453 aaPredicted RBP23.14■■□□□ 1.29
NUP62-216ENST00000599560 GAPVD1Q14C86 1478 aa23.13■■□□□ 1.29
NUP62-216ENST00000599560 FGD5Q6ZNL6 1462 aa23.11■■□□□ 1.29
NUP62-216ENST00000599560 MAGI1Q96QZ7 1491 aaPredicted RBP23.11■■□□□ 1.29
NUP62-216ENST00000599560 SYNJ2O15056 1496 aa23.07■■□□□ 1.28
NUP62-216ENST00000599560 WDR97A6NE52 1622 aa23.07■■□□□ 1.28
NUP62-216ENST00000599560 ERCC6L2Q5T890 1561 aa23.06■■□□□ 1.28
NUP62-216ENST00000599560 GRIN2BQ13224 1484 aa23.05■■□□□ 1.28
NUP62-216ENST00000599560 PBRM1Q86U86 1689 aa23.03■■□□□ 1.28
NUP62-216ENST00000599560 CUX1P39880 1505 aa23.01■■□□□ 1.27
NUP62-216ENST00000599560 KIF13AQ9H1H9 1805 aa22.95■■□□□ 1.26
NUP62-216ENST00000599560 ABCA5Q8WWZ7 1642 aa22.86■■□□□ 1.25
NUP62-216ENST00000599560 CEP170Q5SW79 1584 aa22.85■■□□□ 1.25
NUP62-216ENST00000599560 GRIN2AQ12879 1464 aa22.79■■□□□ 1.24
NUP62-216ENST00000599560 SHROOM2Q13796 1616 aa22.78■■□□□ 1.24
NUP62-216ENST00000599560 ABCA10Q8WWZ4 1543 aa22.77■■□□□ 1.24
NUP62-216ENST00000599560 NUP160Q12769 1436 aa22.74■■□□□ 1.23
NUP62-216ENST00000599560 ILDR1Q86SU0 546 aaPredicted RBP22.74■■□□□ 1.23
NUP62-216ENST00000599560 ADAMTS12P58397 1594 aa22.72■■□□□ 1.23
NUP62-216ENST00000599560 KDM4FA0A1W2PPD8 638 aa22.7■■□□□ 1.22
NUP62-216ENST00000599560 ABCC10Q5T3U5 1492 aa22.6■■□□□ 1.21
NUP62-216ENST00000599560 FAM69CQ0P6D2 419 aa22.6■■□□□ 1.21
NUP62-216ENST00000599560 PRG4Q92954 1404 aaPredicted RBP22.58■■□□□ 1.21
NUP62-216ENST00000599560 DIP2BQ9P265 1576 aa22.58■■□□□ 1.2
NUP62-216ENST00000599560 TSPOAP1O95153 1857 aa22.54■■□□□ 1.2
NUP62-216ENST00000599560 FHAD1B1AJZ9 1412 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms