RNA–Protein interactions for RNA: ENST00000585359.1

GADD45B-202, Transcript of growth arrest and DNA damage inducible beta, humanhuman

TSL 3

Gene GADD45B, Length 750 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45B-202ENST00000585359 NISCHQ9Y2I1 1504 aa36.03■■■■□ 3.36
GADD45B-202ENST00000585359 CCDC180Q9P1Z9 1646 aa32.09■■■□□ 2.73
GADD45B-202ENST00000585359 ABCC9O60706 1549 aa31.54■■■□□ 2.64
GADD45B-202ENST00000585359 RB1CC1Q8TDY2 1594 aa30.26■■■□□ 2.43
GADD45B-202ENST00000585359 NACADO15069 1562 aa30.2■■■□□ 2.42
GADD45B-202ENST00000585359 DCAF8L2P0C7V8 631 aa30.08■■■□□ 2.41
GADD45B-202ENST00000585359 ZCCHC6Q5VYS8 1495 aaKnown RBP29.99■■■□□ 2.39
GADD45B-202ENST00000585359 MYO15BQ96JP2 1530 aa29.98■■■□□ 2.39
GADD45B-202ENST00000585359 DCAF1Q9Y4B6 1507 aa29.81■■■□□ 2.36
GADD45B-202ENST00000585359 UNC13AQ9UPW8 1703 aa29.61■■■□□ 2.33
GADD45B-202ENST00000585359 PABPN1Q86U42 306 aaKnown RBP eCLIP29.43■■■□□ 2.3
GADD45B-202ENST00000585359 BICRAQ9NZM4 1560 aa29.4■■■□□ 2.3
GADD45B-202ENST00000585359 DNAJC5BQ9UF47 199 aa29.29■■■□□ 2.28
GADD45B-202ENST00000585359 SCRIBQ14160 1630 aa29.27■■■□□ 2.28
GADD45B-202ENST00000585359 SHROOM4Q9ULL8 1493 aa29.04■■■□□ 2.24
GADD45B-202ENST00000585359 EIF4G1Q04637 1599 aaKnown RBP28.61■■■□□ 2.17
GADD45B-202ENST00000585359 CC2D2AQ9P2K1 1620 aa28.53■■■□□ 2.16
GADD45B-202ENST00000585359 CECR2Q9BXF3 1484 aa28.35■■■□□ 2.13
GADD45B-202ENST00000585359 SMARCA4P51532 1647 aa27.99■■■□□ 2.07
GADD45B-202ENST00000585359 BAZ1AQ9NRL2 1556 aaPredicted RBP27.91■■■□□ 2.06
GADD45B-202ENST00000585359 NCAPD3P42695 1498 aa27.88■■■□□ 2.05
GADD45B-202ENST00000585359 ATAD2BQ9ULI0 1458 aa27.87■■■□□ 2.05
GADD45B-202ENST00000585359 SMARCA2P51531 1590 aa27.82■■■□□ 2.04
GADD45B-202ENST00000585359 MROH2BQ7Z745 1585 aa27.77■■■□□ 2.04
GADD45B-202ENST00000585359 PEG3Q9GZU2 1588 aa27.73■■■□□ 2.03
GADD45B-202ENST00000585359 HMGXB3Q12766 1538 aa27.72■■■□□ 2.03
GADD45B-202ENST00000585359 BAZ1BQ9UIG0 1483 aaKnown RBP27.62■■■□□ 2.01
GADD45B-202ENST00000585359 WIZO95785 1651 aa27.46■■□□□ 1.99
GADD45B-202ENST00000585359 RSF1Q96T23 1441 aaPredicted RBP27.4■■□□□ 1.98
GADD45B-202ENST00000585359 NESP48681 1621 aa27.27■■□□□ 1.96
GADD45B-202ENST00000585359 ERCC6Q03468 1493 aa27.17■■□□□ 1.94
GADD45B-202ENST00000585359 TOP2AP11388 1531 aaKnown RBP27.16■■□□□ 1.94
GADD45B-202ENST00000585359 LAMC3Q9Y6N6 1575 aa27.15■■□□□ 1.94
GADD45B-202ENST00000585359 DNAJC5Q9H3Z4 198 aa27.11■■□□□ 1.93
GADD45B-202ENST00000585359 CADPSQ9ULU8 1353 aa27.04■■□□□ 1.92
GADD45B-202ENST00000585359 CUX2O14529 1486 aa26.95■■□□□ 1.91
GADD45B-202ENST00000585359 PDS5BQ9NTI5 1447 aa26.95■■□□□ 1.9
GADD45B-202ENST00000585359 KIF21AQ7Z4S6 1674 aa26.94■■□□□ 1.9
GADD45B-202ENST00000585359 THOC2Q8NI27 1593 aaKnown RBP26.9■■□□□ 1.9
GADD45B-202ENST00000585359 CFTRP13569 1480 aa26.87■■□□□ 1.89
GADD45B-202ENST00000585359 CCDC88BA6NC98 1476 aa26.84■■□□□ 1.89
GADD45B-202ENST00000585359 FANCD2Q9BXW9 1451 aa26.74■■□□□ 1.87
GADD45B-202ENST00000585359 MRC2Q9UBG0 1479 aa26.71■■□□□ 1.87
GADD45B-202ENST00000585359 CEP164Q9UPV0 1460 aa26.71■■□□□ 1.87
GADD45B-202ENST00000585359 WDR62O43379 1518 aa26.65■■□□□ 1.86
GADD45B-202ENST00000585359 PRDM2Q13029 1718 aa26.64■■□□□ 1.85
GADD45B-202ENST00000585359 SUPT5HO00267 1087 aaKnown RBP26.53■■□□□ 1.84
GADD45B-202ENST00000585359 URB2Q14146 1524 aaKnown RBP26.5■■□□□ 1.83
GADD45B-202ENST00000585359 TOPBP1Q92547 1522 aa26.3■■□□□ 1.8
GADD45B-202ENST00000585359 ABCC8Q09428 1581 aa26.25■■□□□ 1.79
GADD45B-202ENST00000585359 DNMBPQ6XZF7 1577 aa26.25■■□□□ 1.79
GADD45B-202ENST00000585359 IFT140Q96RY7 1462 aa26.16■■□□□ 1.78
GADD45B-202ENST00000585359 ZNF608Q9ULD9 1512 aaPredicted RBP26.09■■□□□ 1.77
GADD45B-202ENST00000585359 POLA1P09884 1462 aaPredicted RBP26.08■■□□□ 1.77
GADD45B-202ENST00000585359 CUX1P39880 1505 aa26.07■■□□□ 1.76
GADD45B-202ENST00000585359 TARBP1Q13395 1621 aaKnown RBP26.05■■□□□ 1.76
GADD45B-202ENST00000585359 FGD5Q6ZNL6 1462 aa25.98■■□□□ 1.75
GADD45B-202ENST00000585359 EIF4G3O43432 1585 aaKnown RBP25.97■■□□□ 1.75
GADD45B-202ENST00000585359 RAD54L2Q9Y4B4 1467 aa25.96■■□□□ 1.75
GADD45B-202ENST00000585359 SOGA1O94964 1423 aa25.94■■□□□ 1.74
GADD45B-202ENST00000585359 AQRO60306 1485 aaKnown RBP eCLIP25.9■■□□□ 1.744e-9■■■■□ 26
GADD45B-202ENST00000585359 TRIM41Q8WV44 630 aa25.83■■□□□ 1.73
GADD45B-202ENST00000585359 TDRD9Q8NDG6 1382 aaKnown RBP25.82■■□□□ 1.72
GADD45B-202ENST00000585359 WDR97A6NE52 1622 aa25.81■■□□□ 1.72
GADD45B-202ENST00000585359 WRNQ14191 1432 aaPredicted RBP eCLIP25.8■■□□□ 1.72
GADD45B-202ENST00000585359 SYNJ1O43426 1573 aa25.79■■□□□ 1.72
GADD45B-202ENST00000585359 TOP2BQ02880 1626 aa25.79■■□□□ 1.72
GADD45B-202ENST00000585359 BIVM-ERCC5R4GMW8 1640 aa25.79■■□□□ 1.72
GADD45B-202ENST00000585359 OSCARQ8IYS5 282 aa25.77■■□□□ 1.72
GADD45B-202ENST00000585359 ABCA10Q8WWZ4 1543 aa25.73■■□□□ 1.71
GADD45B-202ENST00000585359 GRIN2BQ13224 1484 aa25.66■■□□□ 1.7
GADD45B-202ENST00000585359 CHD1O14646 1710 aa25.66■■□□□ 1.7
GADD45B-202ENST00000585359 ABCA5Q8WWZ7 1642 aa25.66■■□□□ 1.7
GADD45B-202ENST00000585359 SNAPC4Q5SXM2 1469 aa25.66■■□□□ 1.7
GADD45B-202ENST00000585359 GAPVD1Q14C86 1478 aa25.64■■□□□ 1.69
GADD45B-202ENST00000585359 MAGI1Q96QZ7 1491 aaPredicted RBP25.61■■□□□ 1.69
GADD45B-202ENST00000585359 PBRM1Q86U86 1689 aa25.61■■□□□ 1.69
GADD45B-202ENST00000585359 FBLN2P98095 1184 aa25.57■■□□□ 1.68
GADD45B-202ENST00000585359 SYNJ2O15056 1496 aa25.52■■□□□ 1.68
GADD45B-202ENST00000585359 CHMP7Q8WUX9 453 aaPredicted RBP25.48■■□□□ 1.67
GADD45B-202ENST00000585359 RIMBP3CA6NJZ7 1639 aa25.43■■□□□ 1.66
GADD45B-202ENST00000585359 RIMBP3BA6NNM3 1639 aa25.43■■□□□ 1.66
GADD45B-202ENST00000585359 RIMBP3Q9UFD9 1639 aa25.43■■□□□ 1.66
GADD45B-202ENST00000585359 ADAMTS12P58397 1594 aa25.41■■□□□ 1.66
GADD45B-202ENST00000585359 ARHGEF11O15085 1522 aa25.41■■□□□ 1.66
GADD45B-202ENST00000585359 ERICH3Q5RHP9 1530 aa25.41■■□□□ 1.66
GADD45B-202ENST00000585359 CLASP1Q7Z460 1538 aa25.4■■□□□ 1.66
GADD45B-202ENST00000585359 FHAD1B1AJZ9 1412 aa25.34■■□□□ 1.65
GADD45B-202ENST00000585359 GRIN2AQ12879 1464 aa25.34■■□□□ 1.65
GADD45B-202ENST00000585359 KIF27Q86VH2 1401 aa25.27■■□□□ 1.64
GADD45B-202ENST00000585359 CEP170Q5SW79 1584 aa25.24■■□□□ 1.63
GADD45B-202ENST00000585359 NUP160Q12769 1436 aa25.24■■□□□ 1.63
GADD45B-202ENST00000585359 IGF1RP08069 1367 aa25.21■■□□□ 1.63
GADD45B-202ENST00000585359 ARAP1Q96P48 1450 aa25.21■■□□□ 1.63
GADD45B-202ENST00000585359 CUL7Q14999 1698 aa25.14■■□□□ 1.62
GADD45B-202ENST00000585359 CYB5RLQ6IPT4 315 aa25.14■■□□□ 1.62
GADD45B-202ENST00000585359 SHROOM2Q13796 1616 aa25.08■■□□□ 1.61
GADD45B-202ENST00000585359 RUSC2Q8N2Y8 1516 aa25.05■■□□□ 1.6
GADD45B-202ENST00000585359 ERCC6L2Q5T890 1561 aa25.05■■□□□ 1.6
GADD45B-202ENST00000585359 CARMIL1Q5VZK9 1371 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms