RNA–Protein interactions for RNA: ENST00000348547.6

ERGIC3-202, Transcript of ERGIC and golgi 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ERGIC3, Length 1,359 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-202ENST00000348547 NISCHQ9Y2I1 1504 aa30.58■■■□□ 2.49
ERGIC3-202ENST00000348547 CCDC180Q9P1Z9 1646 aa27.01■■□□□ 1.92
ERGIC3-202ENST00000348547 ABCC9O60706 1549 aa26.01■■□□□ 1.75
ERGIC3-202ENST00000348547 ZCCHC6Q5VYS8 1495 aaKnown RBP25.59■■□□□ 1.69
ERGIC3-202ENST00000348547 DCAF1Q9Y4B6 1507 aa25.29■■□□□ 1.64
ERGIC3-202ENST00000348547 NACADO15069 1562 aa25.21■■□□□ 1.63
ERGIC3-202ENST00000348547 MYO15BQ96JP2 1530 aa25.2■■□□□ 1.63
ERGIC3-202ENST00000348547 DCAF8L2P0C7V8 631 aa25.17■■□□□ 1.62
ERGIC3-202ENST00000348547 RB1CC1Q8TDY2 1594 aa25.14■■□□□ 1.61
ERGIC3-202ENST00000348547 UNC13AQ9UPW8 1703 aa24.82■■□□□ 1.56
ERGIC3-202ENST00000348547 SCRIBQ14160 1630 aa24.72■■□□□ 1.55
ERGIC3-202ENST00000348547 BICRAQ9NZM4 1560 aa24.56■■□□□ 1.52
ERGIC3-202ENST00000348547 SHROOM4Q9ULL8 1493 aa24.41■■□□□ 1.5
ERGIC3-202ENST00000348547 PABPN1Q86U42 306 aaKnown RBP eCLIP24.33■■□□□ 1.495e-10■■□□□ 14.5
ERGIC3-202ENST00000348547 CECR2Q9BXF3 1484 aa23.85■■□□□ 1.41
ERGIC3-202ENST00000348547 EIF4G1Q04637 1599 aaKnown RBP23.77■■□□□ 1.4
ERGIC3-202ENST00000348547 SMARCA4P51532 1647 aa23.67■■□□□ 1.38
ERGIC3-202ENST00000348547 MROH2BQ7Z745 1585 aa23.65■■□□□ 1.38
ERGIC3-202ENST00000348547 BAZ1AQ9NRL2 1556 aaPredicted RBP23.62■■□□□ 1.37
ERGIC3-202ENST00000348547 CC2D2AQ9P2K1 1620 aa23.57■■□□□ 1.36
ERGIC3-202ENST00000348547 DNAJC5BQ9UF47 199 aa23.56■■□□□ 1.36
ERGIC3-202ENST00000348547 RSF1Q96T23 1441 aaPredicted RBP23.47■■□□□ 1.35
ERGIC3-202ENST00000348547 PEG3Q9GZU2 1588 aa23.43■■□□□ 1.34
ERGIC3-202ENST00000348547 WIZO95785 1651 aa23.43■■□□□ 1.34
ERGIC3-202ENST00000348547 ATAD2BQ9ULI0 1458 aa23.39■■□□□ 1.33
ERGIC3-202ENST00000348547 SMARCA2P51531 1590 aa23.32■■□□□ 1.32
ERGIC3-202ENST00000348547 NCAPD3P42695 1498 aa23.28■■□□□ 1.32
ERGIC3-202ENST00000348547 HMGXB3Q12766 1538 aa23.23■■□□□ 1.31
ERGIC3-202ENST00000348547 BAZ1BQ9UIG0 1483 aaKnown RBP23.17■■□□□ 1.3
ERGIC3-202ENST00000348547 TOP2AP11388 1531 aaKnown RBP23.13■■□□□ 1.29
ERGIC3-202ENST00000348547 SUPT5HO00267 1087 aaKnown RBP23.07■■□□□ 1.28
ERGIC3-202ENST00000348547 CCDC88BA6NC98 1476 aa22.85■■□□□ 1.25
ERGIC3-202ENST00000348547 NESP48681 1621 aa22.71■■□□□ 1.23
ERGIC3-202ENST00000348547 CFTRP13569 1480 aa22.6■■□□□ 1.21
ERGIC3-202ENST00000348547 LAMC3Q9Y6N6 1575 aa22.59■■□□□ 1.21
ERGIC3-202ENST00000348547 CADPSQ9ULU8 1353 aa22.58■■□□□ 1.21
ERGIC3-202ENST00000348547 PRDM2Q13029 1718 aa22.56■■□□□ 1.2
ERGIC3-202ENST00000348547 KIF21AQ7Z4S6 1674 aa22.48■■□□□ 1.19
ERGIC3-202ENST00000348547 FANCD2Q9BXW9 1451 aa22.36■■□□□ 1.17
ERGIC3-202ENST00000348547 PDS5BQ9NTI5 1447 aa22.32■■□□□ 1.16
ERGIC3-202ENST00000348547 THOC2Q8NI27 1593 aaKnown RBP22.28■■□□□ 1.16
ERGIC3-202ENST00000348547 CEP164Q9UPV0 1460 aa22.27■■□□□ 1.16
ERGIC3-202ENST00000348547 ERCC6Q03468 1493 aa22.25■■□□□ 1.15
ERGIC3-202ENST00000348547 ABCC8Q09428 1581 aa22.23■■□□□ 1.15
ERGIC3-202ENST00000348547 URB2Q14146 1524 aaKnown RBP22.21■■□□□ 1.15
ERGIC3-202ENST00000348547 MRC2Q9UBG0 1479 aa22.17■■□□□ 1.14
ERGIC3-202ENST00000348547 CUX1P39880 1505 aa22.16■■□□□ 1.14
ERGIC3-202ENST00000348547 WDR62O43379 1518 aa22.14■■□□□ 1.14
ERGIC3-202ENST00000348547 SYNJ1O43426 1573 aa22.12■■□□□ 1.13
ERGIC3-202ENST00000348547 DNMBPQ6XZF7 1577 aa22.1■■□□□ 1.13
ERGIC3-202ENST00000348547 TOPBP1Q92547 1522 aa22.09■■□□□ 1.13
ERGIC3-202ENST00000348547 BIVM-ERCC5R4GMW8 1640 aa22.06■■□□□ 1.12
ERGIC3-202ENST00000348547 WRNQ14191 1432 aaPredicted RBP eCLIP22.04■■□□□ 1.12
ERGIC3-202ENST00000348547 TOP2BQ02880 1626 aa22.03■■□□□ 1.12
ERGIC3-202ENST00000348547 CUX2O14529 1486 aa21.97■■□□□ 1.11
ERGIC3-202ENST00000348547 POLA1P09884 1462 aaPredicted RBP21.95■■□□□ 1.1
ERGIC3-202ENST00000348547 FGD5Q6ZNL6 1462 aa21.95■■□□□ 1.1
ERGIC3-202ENST00000348547 TARBP1Q13395 1621 aaKnown RBP21.91■■□□□ 1.1
ERGIC3-202ENST00000348547 WDR97A6NE52 1622 aa21.86■■□□□ 1.09
ERGIC3-202ENST00000348547 RAD54L2Q9Y4B4 1467 aa21.86■■□□□ 1.09
ERGIC3-202ENST00000348547 CHIC1Q5VXU3 224 aa21.85■■□□□ 1.09
ERGIC3-202ENST00000348547 ZNF608Q9ULD9 1512 aaPredicted RBP21.78■■□□□ 1.08
ERGIC3-202ENST00000348547 IFT140Q96RY7 1462 aa21.77■■□□□ 1.08
ERGIC3-202ENST00000348547 SOGA1O94964 1423 aa21.76■■□□□ 1.07
ERGIC3-202ENST00000348547 ABCA10Q8WWZ4 1543 aa21.73■■□□□ 1.07
ERGIC3-202ENST00000348547 EIF4G3O43432 1585 aaKnown RBP21.7■■□□□ 1.06
ERGIC3-202ENST00000348547 TRIM41Q8WV44 630 aa21.7■■□□□ 1.06
ERGIC3-202ENST00000348547 ABCA5Q8WWZ7 1642 aa21.7■■□□□ 1.06
ERGIC3-202ENST00000348547 TDRD9Q8NDG6 1382 aaKnown RBP21.64■■□□□ 1.06
ERGIC3-202ENST00000348547 AQRO60306 1485 aaKnown RBP eCLIP21.64■■□□□ 1.062e-7■■■■□ 24
ERGIC3-202ENST00000348547 RUSC2Q8N2Y8 1516 aa21.64■■□□□ 1.05
ERGIC3-202ENST00000348547 PBRM1Q86U86 1689 aa21.6■■□□□ 1.05
ERGIC3-202ENST00000348547 GAPVD1Q14C86 1478 aa21.55■■□□□ 1.04
ERGIC3-202ENST00000348547 KIF27Q86VH2 1401 aa21.49■■□□□ 1.03
ERGIC3-202ENST00000348547 GRIN2BQ13224 1484 aa21.47■■□□□ 1.03
ERGIC3-202ENST00000348547 ERICH3Q5RHP9 1530 aa21.45■■□□□ 1.02
ERGIC3-202ENST00000348547 SNAPC4Q5SXM2 1469 aa21.45■■□□□ 1.02
ERGIC3-202ENST00000348547 ADAMTS12P58397 1594 aa21.44■■□□□ 1.02
ERGIC3-202ENST00000348547 IGF1RP08069 1367 aa21.43■■□□□ 1.02
ERGIC3-202ENST00000348547 MAGI1Q96QZ7 1491 aaPredicted RBP21.38■■□□□ 1.01
ERGIC3-202ENST00000348547 CHD1O14646 1710 aa21.38■■□□□ 1.01
ERGIC3-202ENST00000348547 CUL7Q14999 1698 aa21.36■■□□□ 1.01
ERGIC3-202ENST00000348547 FAM9AQ8IZU1 332 aaPredicted RBP21.33■■□□□ 1
ERGIC3-202ENST00000348547 EEA1Q15075 1411 aa21.32■■□□□ 1
ERGIC3-202ENST00000348547 PRXQ9BXM0 1461 aa21.31■■□□□ 1
ERGIC3-202ENST00000348547 SYNJ2O15056 1496 aa21.3■■□□□ 1
ERGIC3-202ENST00000348547 FHAD1B1AJZ9 1412 aa21.29■■□□□ 1
ERGIC3-202ENST00000348547 CSRNP3Q8WYN3 585 aa21.25■□□□□ 0.99
ERGIC3-202ENST00000348547 GRIN2AQ12879 1464 aa21.25■□□□□ 0.99
ERGIC3-202ENST00000348547 CARMIL1Q5VZK9 1371 aa21.25■□□□□ 0.99
ERGIC3-202ENST00000348547 KIF21BO75037 1637 aa21.23■□□□□ 0.99
ERGIC3-202ENST00000348547 RAPGEF2Q9Y4G8 1499 aa21.22■□□□□ 0.99
ERGIC3-202ENST00000348547 CEP170Q5SW79 1584 aa21.21■□□□□ 0.99
ERGIC3-202ENST00000348547 NUP160Q12769 1436 aa21.15■□□□□ 0.98
ERGIC3-202ENST00000348547 FBLN2P98095 1184 aa21.13■□□□□ 0.97
ERGIC3-202ENST00000348547 CLASP1Q7Z460 1538 aa21.13■□□□□ 0.97
ERGIC3-202ENST00000348547 CHMP7Q8WUX9 453 aaPredicted RBP21.12■□□□□ 0.97
ERGIC3-202ENST00000348547 CTTNBP2Q8WZ74 1663 aa21.09■□□□□ 0.97
ERGIC3-202ENST00000348547 GOLGA3Q08378 1498 aa21.06■□□□□ 0.96
ERGIC3-202ENST00000348547 EHMT2Q96KQ7 1210 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms