RNA–Protein interactions for RNA: ENST00000481935.5

ABCD4-211, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 2,336 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-211ENST00000481935 NISCHQ9Y2I1 1504 aa28.77■■■□□ 2.2
ABCD4-211ENST00000481935 CCDC180Q9P1Z9 1646 aa25.38■■□□□ 1.65
ABCD4-211ENST00000481935 ABCC9O60706 1549 aa24.93■■□□□ 1.58
ABCD4-211ENST00000481935 DCAF8L2P0C7V8 631 aa24.26■■□□□ 1.47
ABCD4-211ENST00000481935 ZCCHC6Q5VYS8 1495 aaKnown RBP23.99■■□□□ 1.43
ABCD4-211ENST00000481935 RB1CC1Q8TDY2 1594 aa23.86■■□□□ 1.41
ABCD4-211ENST00000481935 NACADO15069 1562 aa23.83■■□□□ 1.41
ABCD4-211ENST00000481935 DCAF1Q9Y4B6 1507 aa23.65■■□□□ 1.38
ABCD4-211ENST00000481935 MYO15BQ96JP2 1530 aa23.64■■□□□ 1.37
ABCD4-211ENST00000481935 UNC13AQ9UPW8 1703 aa23.46■■□□□ 1.35
ABCD4-211ENST00000481935 SCRIBQ14160 1630 aa23.42■■□□□ 1.34
ABCD4-211ENST00000481935 PABPN1Q86U42 306 aaKnown RBP eCLIP23.41■■□□□ 1.342e-6■■□□□ 13
ABCD4-211ENST00000481935 BICRAQ9NZM4 1560 aa23.22■■□□□ 1.31
ABCD4-211ENST00000481935 SHROOM4Q9ULL8 1493 aa23.16■■□□□ 1.3
ABCD4-211ENST00000481935 DNAJC5BQ9UF47 199 aa22.79■■□□□ 1.24
ABCD4-211ENST00000481935 EIF4G1Q04637 1599 aaKnown RBP22.58■■□□□ 1.21
ABCD4-211ENST00000481935 CECR2Q9BXF3 1484 aa22.53■■□□□ 1.2
ABCD4-211ENST00000481935 CC2D2AQ9P2K1 1620 aa22.48■■□□□ 1.19
ABCD4-211ENST00000481935 SMARCA4P51532 1647 aa22.31■■□□□ 1.16
ABCD4-211ENST00000481935 MROH2BQ7Z745 1585 aa22.27■■□□□ 1.16
ABCD4-211ENST00000481935 BAZ1AQ9NRL2 1556 aaPredicted RBP22.25■■□□□ 1.15
ABCD4-211ENST00000481935 ATAD2BQ9ULI0 1458 aa22.13■■□□□ 1.13
ABCD4-211ENST00000481935 SUPT5HO00267 1087 aaKnown RBP22.11■■□□□ 1.13
ABCD4-211ENST00000481935 WIZO95785 1651 aa22.07■■□□□ 1.12
ABCD4-211ENST00000481935 RSF1Q96T23 1441 aaPredicted RBP22.05■■□□□ 1.12
ABCD4-211ENST00000481935 SMARCA2P51531 1590 aa22.04■■□□□ 1.12
ABCD4-211ENST00000481935 NCAPD3P42695 1498 aa22.02■■□□□ 1.12
ABCD4-211ENST00000481935 BAZ1BQ9UIG0 1483 aaKnown RBP21.97■■□□□ 1.11
ABCD4-211ENST00000481935 PEG3Q9GZU2 1588 aa21.97■■□□□ 1.11
ABCD4-211ENST00000481935 HMGXB3Q12766 1538 aa21.91■■□□□ 1.1
ABCD4-211ENST00000481935 TOP2AP11388 1531 aaKnown RBP21.71■■□□□ 1.07
ABCD4-211ENST00000481935 NESP48681 1621 aa21.66■■□□□ 1.06
ABCD4-211ENST00000481935 CCDC88BA6NC98 1476 aa21.54■■□□□ 1.04
ABCD4-211ENST00000481935 CADPSQ9ULU8 1353 aa21.44■■□□□ 1.02
ABCD4-211ENST00000481935 ERCC6Q03468 1493 aa21.41■■□□□ 1.02
ABCD4-211ENST00000481935 LAMC3Q9Y6N6 1575 aa21.41■■□□□ 1.02
ABCD4-211ENST00000481935 KIF21AQ7Z4S6 1674 aa21.34■■□□□ 1.01
ABCD4-211ENST00000481935 CFTRP13569 1480 aa21.34■■□□□ 1.01
ABCD4-211ENST00000481935 PDS5BQ9NTI5 1447 aa21.28■■□□□ 1
ABCD4-211ENST00000481935 FANCD2Q9BXW9 1451 aa21.24■□□□□ 0.99
ABCD4-211ENST00000481935 CEP164Q9UPV0 1460 aa21.17■□□□□ 0.98
ABCD4-211ENST00000481935 PRDM2Q13029 1718 aa21.17■□□□□ 0.98
ABCD4-211ENST00000481935 CHIC1Q5VXU3 224 aa21.15■□□□□ 0.98
ABCD4-211ENST00000481935 THOC2Q8NI27 1593 aaKnown RBP21.14■□□□□ 0.97
ABCD4-211ENST00000481935 MRC2Q9UBG0 1479 aa21.07■□□□□ 0.96
ABCD4-211ENST00000481935 URB2Q14146 1524 aaKnown RBP21.04■□□□□ 0.96
ABCD4-211ENST00000481935 WDR62O43379 1518 aa20.98■□□□□ 0.95
ABCD4-211ENST00000481935 CUX2O14529 1486 aa20.95■□□□□ 0.94
ABCD4-211ENST00000481935 ABCC8Q09428 1581 aa20.92■□□□□ 0.94
ABCD4-211ENST00000481935 TOPBP1Q92547 1522 aa20.91■□□□□ 0.94
ABCD4-211ENST00000481935 CUX1P39880 1505 aa20.86■□□□□ 0.93
ABCD4-211ENST00000481935 DNMBPQ6XZF7 1577 aa20.85■□□□□ 0.93
ABCD4-211ENST00000481935 WRNQ14191 1432 aaPredicted RBP eCLIP20.77■□□□□ 0.92
ABCD4-211ENST00000481935 POLA1P09884 1462 aaPredicted RBP20.77■□□□□ 0.92
ABCD4-211ENST00000481935 SYNJ1O43426 1573 aa20.76■□□□□ 0.91
ABCD4-211ENST00000481935 RAD54L2Q9Y4B4 1467 aa20.76■□□□□ 0.91
ABCD4-211ENST00000481935 FGD5Q6ZNL6 1462 aa20.75■□□□□ 0.91
ABCD4-211ENST00000481935 ZNF608Q9ULD9 1512 aaPredicted RBP20.72■□□□□ 0.91
ABCD4-211ENST00000481935 TRIM41Q8WV44 630 aa20.7■□□□□ 0.9
ABCD4-211ENST00000481935 SOGA1O94964 1423 aa20.68■□□□□ 0.9
ABCD4-211ENST00000481935 TOP2BQ02880 1626 aa20.66■□□□□ 0.9
ABCD4-211ENST00000481935 TARBP1Q13395 1621 aaKnown RBP20.66■□□□□ 0.9
ABCD4-211ENST00000481935 IFT140Q96RY7 1462 aa20.66■□□□□ 0.9
ABCD4-211ENST00000481935 HRCP23327 699 aa20.64■□□□□ 0.89
ABCD4-211ENST00000481935 BIVM-ERCC5R4GMW8 1640 aa20.64■□□□□ 0.89
ABCD4-211ENST00000481935 TDRD9Q8NDG6 1382 aaKnown RBP20.64■□□□□ 0.89
ABCD4-211ENST00000481935 AQRO60306 1485 aaKnown RBP eCLIP20.63■□□□□ 0.893e-8■■■■■ 28.1
ABCD4-211ENST00000481935 EIF4G3O43432 1585 aaKnown RBP20.58■□□□□ 0.88
ABCD4-211ENST00000481935 WDR97A6NE52 1622 aa20.51■□□□□ 0.87
ABCD4-211ENST00000481935 ABCA10Q8WWZ4 1543 aa20.48■□□□□ 0.87
ABCD4-211ENST00000481935 GAPVD1Q14C86 1478 aa20.44■□□□□ 0.86
ABCD4-211ENST00000481935 FBLN2P98095 1184 aa20.43■□□□□ 0.86
ABCD4-211ENST00000481935 FAM9AQ8IZU1 332 aaPredicted RBP20.43■□□□□ 0.86
ABCD4-211ENST00000481935 LOC105371045A0A1W2PR82 267 aa20.43■□□□□ 0.86
ABCD4-211ENST00000481935 PCGF6Q9BYE7 350 aa20.41■□□□□ 0.86
ABCD4-211ENST00000481935 ABCA5Q8WWZ7 1642 aa20.4■□□□□ 0.86
ABCD4-211ENST00000481935 SNAPC4Q5SXM2 1469 aa20.39■□□□□ 0.85
ABCD4-211ENST00000481935 PBRM1Q86U86 1689 aa20.39■□□□□ 0.85
ABCD4-211ENST00000481935 GRIN2BQ13224 1484 aa20.36■□□□□ 0.85
ABCD4-211ENST00000481935 RUSC2Q8N2Y8 1516 aa20.34■□□□□ 0.85
ABCD4-211ENST00000481935 CHD1O14646 1710 aa20.32■□□□□ 0.84
ABCD4-211ENST00000481935 KIF27Q86VH2 1401 aa20.28■□□□□ 0.84
ABCD4-211ENST00000481935 CHMP7Q8WUX9 453 aaPredicted RBP20.28■□□□□ 0.84
ABCD4-211ENST00000481935 MAGI1Q96QZ7 1491 aaPredicted RBP20.25■□□□□ 0.83
ABCD4-211ENST00000481935 OSCARQ8IYS5 282 aa20.25■□□□□ 0.83
ABCD4-211ENST00000481935 EHMT2Q96KQ7 1210 aa20.23■□□□□ 0.83
ABCD4-211ENST00000481935 IGF1RP08069 1367 aa20.22■□□□□ 0.83
ABCD4-211ENST00000481935 DNAJC5Q9H3Z4 198 aa20.22■□□□□ 0.83
ABCD4-211ENST00000481935 ERICH3Q5RHP9 1530 aa20.21■□□□□ 0.83
ABCD4-211ENST00000481935 SYNJ2O15056 1496 aa20.21■□□□□ 0.83
ABCD4-211ENST00000481935 ADAMTS12P58397 1594 aa20.2■□□□□ 0.82
ABCD4-211ENST00000481935 FHAD1B1AJZ9 1412 aa20.15■□□□□ 0.82
ABCD4-211ENST00000481935 GRIN2AQ12879 1464 aa20.13■□□□□ 0.81
ABCD4-211ENST00000481935 CARMIL1Q5VZK9 1371 aa20.11■□□□□ 0.81
ABCD4-211ENST00000481935 CEP170Q5SW79 1584 aa20.07■□□□□ 0.8
ABCD4-211ENST00000481935 CUL7Q14999 1698 aa20.07■□□□□ 0.8
ABCD4-211ENST00000481935 TRIM26Q12899 539 aaPredicted RBP20.05■□□□□ 0.8
ABCD4-211ENST00000481935 EEA1Q15075 1411 aa20.05■□□□□ 0.8
ABCD4-211ENST00000481935 PPARGC1BQ86YN6 1023 aaKnown RBP20.04■□□□□ 0.8
ABCD4-211ENST00000481935 CSRNP3Q8WYN3 585 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms