RNA–Protein interactions for RNA: ENST00000518928.1

TSNARE1-203, Transcript of t-SNARE domain containing 1, humanhuman

TSL 3

Gene TSNARE1, Length 940 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-203ENST00000518928 NISCHQ9Y2I1 1504 aa35.27■■■■□ 3.24
TSNARE1-203ENST00000518928 CCDC180Q9P1Z9 1646 aa31.46■■■□□ 2.63
TSNARE1-203ENST00000518928 ABCC9O60706 1549 aa31.39■■■□□ 2.62
TSNARE1-203ENST00000518928 RB1CC1Q8TDY2 1594 aa29.82■■■□□ 2.36
TSNARE1-203ENST00000518928 DCAF8L2P0C7V8 631 aa29.67■■■□□ 2.34
TSNARE1-203ENST00000518928 NACADO15069 1562 aa29.67■■■□□ 2.34
TSNARE1-203ENST00000518928 DNAJC5BQ9UF47 199 aa29.34■■■□□ 2.29
TSNARE1-203ENST00000518928 MYO15BQ96JP2 1530 aa29.3■■■□□ 2.28
TSNARE1-203ENST00000518928 ZCCHC6Q5VYS8 1495 aaKnown RBP29.3■■■□□ 2.28
TSNARE1-203ENST00000518928 UNC13AQ9UPW8 1703 aa29.3■■■□□ 2.28
TSNARE1-203ENST00000518928 PABPN1Q86U42 306 aaKnown RBP eCLIP29.29■■■□□ 2.28
TSNARE1-203ENST00000518928 BICRAQ9NZM4 1560 aa29.11■■■□□ 2.25
TSNARE1-203ENST00000518928 DCAF1Q9Y4B6 1507 aa29.04■■■□□ 2.24
TSNARE1-203ENST00000518928 SCRIBQ14160 1630 aa28.83■■■□□ 2.21
TSNARE1-203ENST00000518928 SHROOM4Q9ULL8 1493 aa28.48■■■□□ 2.15
TSNARE1-203ENST00000518928 CC2D2AQ9P2K1 1620 aa28.32■■■□□ 2.12
TSNARE1-203ENST00000518928 EIF4G1Q04637 1599 aaKnown RBP28.31■■■□□ 2.12
TSNARE1-203ENST00000518928 CECR2Q9BXF3 1484 aa28.18■■■□□ 2.1
TSNARE1-203ENST00000518928 SMARCA4P51532 1647 aa27.47■■□□□ 1.99
TSNARE1-203ENST00000518928 ATAD2BQ9ULI0 1458 aa27.44■■□□□ 1.98
TSNARE1-203ENST00000518928 NCAPD3P42695 1498 aa27.43■■□□□ 1.98
TSNARE1-203ENST00000518928 BAZ1AQ9NRL2 1556 aaPredicted RBP27.3■■□□□ 1.96
TSNARE1-203ENST00000518928 SMARCA2P51531 1590 aa27.27■■□□□ 1.96
TSNARE1-203ENST00000518928 MROH2BQ7Z745 1585 aa27.26■■□□□ 1.96
TSNARE1-203ENST00000518928 HMGXB3Q12766 1538 aa27.24■■□□□ 1.95
TSNARE1-203ENST00000518928 PEG3Q9GZU2 1588 aa27.15■■□□□ 1.94
TSNARE1-203ENST00000518928 BAZ1BQ9UIG0 1483 aaKnown RBP27.15■■□□□ 1.94
TSNARE1-203ENST00000518928 NESP48681 1621 aa27.08■■□□□ 1.93
TSNARE1-203ENST00000518928 ERCC6Q03468 1493 aa26.97■■□□□ 1.91
TSNARE1-203ENST00000518928 WIZO95785 1651 aa26.95■■□□□ 1.9
TSNARE1-203ENST00000518928 CUX2O14529 1486 aa26.8■■□□□ 1.88
TSNARE1-203ENST00000518928 RSF1Q96T23 1441 aaPredicted RBP26.74■■□□□ 1.87
TSNARE1-203ENST00000518928 LAMC3Q9Y6N6 1575 aa26.74■■□□□ 1.87
TSNARE1-203ENST00000518928 THOC2Q8NI27 1593 aaKnown RBP26.7■■□□□ 1.86
TSNARE1-203ENST00000518928 KIF21AQ7Z4S6 1674 aa26.68■■□□□ 1.86
TSNARE1-203ENST00000518928 CADPSQ9ULU8 1353 aa26.61■■□□□ 1.85
TSNARE1-203ENST00000518928 DNAJC5Q9H3Z4 198 aa26.57■■□□□ 1.84
TSNARE1-203ENST00000518928 PDS5BQ9NTI5 1447 aa26.55■■□□□ 1.84
TSNARE1-203ENST00000518928 TOP2AP11388 1531 aaKnown RBP26.54■■□□□ 1.84
TSNARE1-203ENST00000518928 CFTRP13569 1480 aa26.38■■□□□ 1.81
TSNARE1-203ENST00000518928 MRC2Q9UBG0 1479 aa26.38■■□□□ 1.81
TSNARE1-203ENST00000518928 FANCD2Q9BXW9 1451 aa26.35■■□□□ 1.81
TSNARE1-203ENST00000518928 WDR62O43379 1518 aa26.33■■□□□ 1.81
TSNARE1-203ENST00000518928 CEP164Q9UPV0 1460 aa26.31■■□□□ 1.8
TSNARE1-203ENST00000518928 CCDC88BA6NC98 1476 aa26.29■■□□□ 1.8
TSNARE1-203ENST00000518928 URB2Q14146 1524 aaKnown RBP26.19■■□□□ 1.78
TSNARE1-203ENST00000518928 PRDM2Q13029 1718 aa26.09■■□□□ 1.77
TSNARE1-203ENST00000518928 TOPBP1Q92547 1522 aa25.9■■□□□ 1.74
TSNARE1-203ENST00000518928 ZNF608Q9ULD9 1512 aaPredicted RBP25.86■■□□□ 1.73
TSNARE1-203ENST00000518928 DNMBPQ6XZF7 1577 aa25.78■■□□□ 1.72
TSNARE1-203ENST00000518928 SUPT5HO00267 1087 aaKnown RBP25.76■■□□□ 1.71
TSNARE1-203ENST00000518928 IFT140Q96RY7 1462 aa25.76■■□□□ 1.71
TSNARE1-203ENST00000518928 ABCC8Q09428 1581 aa25.67■■□□□ 1.7
TSNARE1-203ENST00000518928 TARBP1Q13395 1621 aaKnown RBP25.66■■□□□ 1.7
TSNARE1-203ENST00000518928 POLA1P09884 1462 aaPredicted RBP25.66■■□□□ 1.7
TSNARE1-203ENST00000518928 EIF4G3O43432 1585 aaKnown RBP25.65■■□□□ 1.7
TSNARE1-203ENST00000518928 RAD54L2Q9Y4B4 1467 aa25.62■■□□□ 1.69
TSNARE1-203ENST00000518928 AQRO60306 1485 aaKnown RBP eCLIP25.61■■□□□ 1.697e-7■□□□□ 11.3
TSNARE1-203ENST00000518928 OSCARQ8IYS5 282 aa25.61■■□□□ 1.69
TSNARE1-203ENST00000518928 CUX1P39880 1505 aa25.58■■□□□ 1.69
TSNARE1-203ENST00000518928 TRIM41Q8WV44 630 aa25.57■■□□□ 1.68
TSNARE1-203ENST00000518928 FGD5Q6ZNL6 1462 aa25.53■■□□□ 1.68
TSNARE1-203ENST00000518928 SOGA1O94964 1423 aa25.49■■□□□ 1.67
TSNARE1-203ENST00000518928 TDRD9Q8NDG6 1382 aaKnown RBP25.49■■□□□ 1.67
TSNARE1-203ENST00000518928 CHD1O14646 1710 aa25.43■■□□□ 1.66
TSNARE1-203ENST00000518928 RIMBP3CA6NJZ7 1639 aa25.37■■□□□ 1.65
TSNARE1-203ENST00000518928 RIMBP3BA6NNM3 1639 aa25.37■■□□□ 1.65
TSNARE1-203ENST00000518928 RIMBP3Q9UFD9 1639 aa25.37■■□□□ 1.65
TSNARE1-203ENST00000518928 WDR97A6NE52 1622 aa25.34■■□□□ 1.65
TSNARE1-203ENST00000518928 FBLN2P98095 1184 aa25.33■■□□□ 1.65
TSNARE1-203ENST00000518928 SNAPC4Q5SXM2 1469 aa25.33■■□□□ 1.65
TSNARE1-203ENST00000518928 ARHGEF11O15085 1522 aa25.31■■□□□ 1.64
TSNARE1-203ENST00000518928 SYNJ1O43426 1573 aa25.24■■□□□ 1.63
TSNARE1-203ENST00000518928 GRIN2BQ13224 1484 aa25.21■■□□□ 1.63
TSNARE1-203ENST00000518928 ABCA10Q8WWZ4 1543 aa25.21■■□□□ 1.63
TSNARE1-203ENST00000518928 PBRM1Q86U86 1689 aa25.19■■□□□ 1.62
TSNARE1-203ENST00000518928 ABCA5Q8WWZ7 1642 aa25.19■■□□□ 1.62
TSNARE1-203ENST00000518928 GAPVD1Q14C86 1478 aa25.18■■□□□ 1.62
TSNARE1-203ENST00000518928 MAGI1Q96QZ7 1491 aaPredicted RBP25.17■■□□□ 1.62
TSNARE1-203ENST00000518928 BIVM-ERCC5R4GMW8 1640 aa25.17■■□□□ 1.62
TSNARE1-203ENST00000518928 WRNQ14191 1432 aaPredicted RBP eCLIP25.17■■□□□ 1.62
TSNARE1-203ENST00000518928 TOP2BQ02880 1626 aa25.16■■□□□ 1.62
TSNARE1-203ENST00000518928 CLASP1Q7Z460 1538 aa25.13■■□□□ 1.61
TSNARE1-203ENST00000518928 CHMP7Q8WUX9 453 aaPredicted RBP25.12■■□□□ 1.61
TSNARE1-203ENST00000518928 SYNJ2O15056 1496 aa25.12■■□□□ 1.61
TSNARE1-203ENST00000518928 ARAP1Q96P48 1450 aa25.12■■□□□ 1.61
TSNARE1-203ENST00000518928 CYB5RLQ6IPT4 315 aa25.08■■□□□ 1.61
TSNARE1-203ENST00000518928 ADAMTS12P58397 1594 aa24.98■■□□□ 1.59
TSNARE1-203ENST00000518928 GRIN2AQ12879 1464 aa24.93■■□□□ 1.58
TSNARE1-203ENST00000518928 CEP170Q5SW79 1584 aa24.91■■□□□ 1.58
TSNARE1-203ENST00000518928 ERCC6L2Q5T890 1561 aa24.88■■□□□ 1.57
TSNARE1-203ENST00000518928 ERICH3Q5RHP9 1530 aa24.86■■□□□ 1.57
TSNARE1-203ENST00000518928 FHAD1B1AJZ9 1412 aa24.85■■□□□ 1.57
TSNARE1-203ENST00000518928 NUP160Q12769 1436 aa24.85■■□□□ 1.57
TSNARE1-203ENST00000518928 SHROOM2Q13796 1616 aa24.72■■□□□ 1.55
TSNARE1-203ENST00000518928 TRHP20396 242 aaPredicted RBP24.68■■□□□ 1.54
TSNARE1-203ENST00000518928 IGF1RP08069 1367 aa24.67■■□□□ 1.54
TSNARE1-203ENST00000518928 RUSC2Q8N2Y8 1516 aa24.63■■□□□ 1.53
TSNARE1-203ENST00000518928 KIF27Q86VH2 1401 aa24.61■■□□□ 1.53
TSNARE1-203ENST00000518928 PRG4Q92954 1404 aaPredicted RBP24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms