RNA–Protein interactions for RNA: ENST00000592937.1

GADD45B-206, Transcript of growth arrest and DNA damage inducible beta, humanhuman

TSL 2

Gene GADD45B, Length 2,007 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45B-206ENST00000592937 NISCHQ9Y2I1 1504 aa37.51■■■■□ 3.59
GADD45B-206ENST00000592937 CCDC180Q9P1Z9 1646 aa32.87■■■□□ 2.85
GADD45B-206ENST00000592937 ZCCHC6Q5VYS8 1495 aaKnown RBP31.47■■■□□ 2.63
GADD45B-206ENST00000592937 ABCC9O60706 1549 aa31.32■■■□□ 2.6
GADD45B-206ENST00000592937 DCAF8L2P0C7V8 631 aa31.02■■■□□ 2.56
GADD45B-206ENST00000592937 DCAF1Q9Y4B6 1507 aa30.97■■■□□ 2.55
GADD45B-206ENST00000592937 MYO15BQ96JP2 1530 aa30.69■■■□□ 2.5
GADD45B-206ENST00000592937 NACADO15069 1562 aa30.62■■■□□ 2.49
GADD45B-206ENST00000592937 SHROOM4Q9ULL8 1493 aa30.45■■■□□ 2.46
GADD45B-206ENST00000592937 RB1CC1Q8TDY2 1594 aa30.44■■■□□ 2.46
GADD45B-206ENST00000592937 SCRIBQ14160 1630 aa30.22■■■□□ 2.43
GADD45B-206ENST00000592937 UNC13AQ9UPW8 1703 aa29.98■■■□□ 2.39
GADD45B-206ENST00000592937 BICRAQ9NZM4 1560 aa29.59■■■□□ 2.33
GADD45B-206ENST00000592937 PABPN1Q86U42 306 aaKnown RBP eCLIP29.45■■■□□ 2.3
GADD45B-206ENST00000592937 CECR2Q9BXF3 1484 aa29.2■■■□□ 2.26
GADD45B-206ENST00000592937 SUPT5HO00267 1087 aaKnown RBP29.11■■■□□ 2.25
GADD45B-206ENST00000592937 MROH2BQ7Z745 1585 aa29■■■□□ 2.23
GADD45B-206ENST00000592937 RSF1Q96T23 1441 aaPredicted RBP28.98■■■□□ 2.23
GADD45B-206ENST00000592937 BAZ1AQ9NRL2 1556 aaPredicted RBP28.98■■■□□ 2.23
GADD45B-206ENST00000592937 SMARCA4P51532 1647 aa28.93■■■□□ 2.22
GADD45B-206ENST00000592937 WIZO95785 1651 aa28.8■■■□□ 2.2
GADD45B-206ENST00000592937 EIF4G1Q04637 1599 aaKnown RBP28.7■■■□□ 2.18
GADD45B-206ENST00000592937 PEG3Q9GZU2 1588 aa28.56■■■□□ 2.16
GADD45B-206ENST00000592937 ATAD2BQ9ULI0 1458 aa28.48■■■□□ 2.15
GADD45B-206ENST00000592937 SMARCA2P51531 1590 aa28.44■■■□□ 2.14
GADD45B-206ENST00000592937 TOP2AP11388 1531 aaKnown RBP28.43■■■□□ 2.14
GADD45B-206ENST00000592937 CC2D2AQ9P2K1 1620 aa28.36■■■□□ 2.13
GADD45B-206ENST00000592937 BAZ1BQ9UIG0 1483 aaKnown RBP28.3■■■□□ 2.12
GADD45B-206ENST00000592937 NCAPD3P42695 1498 aa28.24■■■□□ 2.11
GADD45B-206ENST00000592937 HMGXB3Q12766 1538 aa28.22■■■□□ 2.11
GADD45B-206ENST00000592937 CCDC88BA6NC98 1476 aa28.12■■■□□ 2.09
GADD45B-206ENST00000592937 DNAJC5BQ9UF47 199 aa27.85■■■□□ 2.05
GADD45B-206ENST00000592937 CHIC1Q5VXU3 224 aa27.7■■■□□ 2.03
GADD45B-206ENST00000592937 CFTRP13569 1480 aa27.56■■■□□ 2
GADD45B-206ENST00000592937 PRDM2Q13029 1718 aa27.53■■■□□ 2
GADD45B-206ENST00000592937 ABCC8Q09428 1581 aa27.51■■■□□ 2
GADD45B-206ENST00000592937 CADPSQ9ULU8 1353 aa27.49■■□□□ 1.99
GADD45B-206ENST00000592937 NESP48681 1621 aa27.44■■□□□ 1.98
GADD45B-206ENST00000592937 LAMC3Q9Y6N6 1575 aa27.37■■□□□ 1.97
GADD45B-206ENST00000592937 TRIM41Q8WV44 630 aa27.34■■□□□ 1.97
GADD45B-206ENST00000592937 WRNQ14191 1432 aaPredicted RBP eCLIP27.28■■□□□ 1.96
GADD45B-206ENST00000592937 SYNJ1O43426 1573 aa27.26■■□□□ 1.95
GADD45B-206ENST00000592937 FANCD2Q9BXW9 1451 aa27.23■■□□□ 1.95
GADD45B-206ENST00000592937 KIF21AQ7Z4S6 1674 aa27.17■■□□□ 1.94
GADD45B-206ENST00000592937 CUX1P39880 1505 aa27.14■■□□□ 1.94
GADD45B-206ENST00000592937 TOP2BQ02880 1626 aa27.14■■□□□ 1.93
GADD45B-206ENST00000592937 BIVM-ERCC5R4GMW8 1640 aa27.14■■□□□ 1.93
GADD45B-206ENST00000592937 PDS5BQ9NTI5 1447 aa27.1■■□□□ 1.93
GADD45B-206ENST00000592937 CEP164Q9UPV0 1460 aa27.09■■□□□ 1.93
GADD45B-206ENST00000592937 DNMBPQ6XZF7 1577 aa26.96■■□□□ 1.91
GADD45B-206ENST00000592937 URB2Q14146 1524 aaKnown RBP26.94■■□□□ 1.9
GADD45B-206ENST00000592937 TOPBP1Q92547 1522 aa26.92■■□□□ 1.9
GADD45B-206ENST00000592937 FAM9AQ8IZU1 332 aaPredicted RBP26.89■■□□□ 1.9
GADD45B-206ENST00000592937 SOGA1O94964 1423 aa26.88■■□□□ 1.89
GADD45B-206ENST00000592937 FGD5Q6ZNL6 1462 aa26.86■■□□□ 1.89
GADD45B-206ENST00000592937 ERCC6Q03468 1493 aa26.84■■□□□ 1.89
GADD45B-206ENST00000592937 RUSC2Q8N2Y8 1516 aa26.84■■□□□ 1.89
GADD45B-206ENST00000592937 MRC2Q9UBG0 1479 aa26.82■■□□□ 1.88
GADD45B-206ENST00000592937 POLA1P09884 1462 aaPredicted RBP26.77■■□□□ 1.88
GADD45B-206ENST00000592937 THOC2Q8NI27 1593 aaKnown RBP26.75■■□□□ 1.87
GADD45B-206ENST00000592937 WDR62O43379 1518 aa26.72■■□□□ 1.87
GADD45B-206ENST00000592937 RAD54L2Q9Y4B4 1467 aa26.7■■□□□ 1.86
GADD45B-206ENST00000592937 EEA1Q15075 1411 aa26.69■■□□□ 1.86
GADD45B-206ENST00000592937 LOC105371045A0A1W2PR82 267 aa26.66■■□□□ 1.86
GADD45B-206ENST00000592937 WDR97A6NE52 1622 aa26.64■■□□□ 1.85
GADD45B-206ENST00000592937 CUX2O14529 1486 aa26.62■■□□□ 1.85
GADD45B-206ENST00000592937 ABCA10Q8WWZ4 1543 aa26.59■■□□□ 1.85
GADD45B-206ENST00000592937 KIF27Q86VH2 1401 aa26.58■■□□□ 1.85
GADD45B-206ENST00000592937 TARBP1Q13395 1621 aaKnown RBP26.58■■□□□ 1.85
GADD45B-206ENST00000592937 CSRNP3Q8WYN3 585 aa26.58■■□□□ 1.85
GADD45B-206ENST00000592937 EHMT2Q96KQ7 1210 aa26.56■■□□□ 1.84
GADD45B-206ENST00000592937 ABCA5Q8WWZ7 1642 aa26.46■■□□□ 1.83
GADD45B-206ENST00000592937 KIF21BO75037 1637 aa26.45■■□□□ 1.83
GADD45B-206ENST00000592937 TDRD9Q8NDG6 1382 aaKnown RBP26.42■■□□□ 1.82
GADD45B-206ENST00000592937 IFT140Q96RY7 1462 aa26.42■■□□□ 1.82
GADD45B-206ENST00000592937 IGF1RP08069 1367 aa26.38■■□□□ 1.81
GADD45B-206ENST00000592937 PRXQ9BXM0 1461 aa26.37■■□□□ 1.81
GADD45B-206ENST00000592937 GOLGA3Q08378 1498 aa26.36■■□□□ 1.81
GADD45B-206ENST00000592937 GAPVD1Q14C86 1478 aa26.36■■□□□ 1.81
GADD45B-206ENST00000592937 ZNF608Q9ULD9 1512 aaPredicted RBP26.36■■□□□ 1.81
GADD45B-206ENST00000592937 RAPGEF2Q9Y4G8 1499 aa26.36■■□□□ 1.81
GADD45B-206ENST00000592937 PBRM1Q86U86 1689 aa26.34■■□□□ 1.81
GADD45B-206ENST00000592937 AQRO60306 1485 aaKnown RBP eCLIP26.32■■□□□ 1.84e-9■■■■□ 26
GADD45B-206ENST00000592937 ERICH3Q5RHP9 1530 aa26.3■■□□□ 1.8
GADD45B-206ENST00000592937 EIF4G3O43432 1585 aaKnown RBP26.3■■□□□ 1.8
GADD45B-206ENST00000592937 CUL7Q14999 1698 aa26.27■■□□□ 1.8
GADD45B-206ENST00000592937 CARMIL1Q5VZK9 1371 aa26.24■■□□□ 1.79
GADD45B-206ENST00000592937 UBTFP17480 764 aaKnown RBP26.23■■□□□ 1.79
GADD45B-206ENST00000592937 TNIKQ9UKE5 1360 aa26.2■■□□□ 1.78
GADD45B-206ENST00000592937 GRIN2BQ13224 1484 aa26.18■■□□□ 1.78
GADD45B-206ENST00000592937 ADAMTS12P58397 1594 aa26.13■■□□□ 1.77
GADD45B-206ENST00000592937 CEP162Q5TB80 1403 aa26.09■■□□□ 1.77
GADD45B-206ENST00000592937 SNAPC4Q5SXM2 1469 aa26.08■■□□□ 1.77
GADD45B-206ENST00000592937 FHAD1B1AJZ9 1412 aa26.04■■□□□ 1.76
GADD45B-206ENST00000592937 CTTNBP2Q8WZ74 1663 aa26.01■■□□□ 1.75
GADD45B-206ENST00000592937 MAGI1Q96QZ7 1491 aaPredicted RBP25.99■■□□□ 1.75
GADD45B-206ENST00000592937 RANGAP1P46060 587 aaPredicted RBP25.95■■□□□ 1.74
GADD45B-206ENST00000592937 CLIP1P30622 1438 aa25.93■■□□□ 1.74
GADD45B-206ENST00000592937 SYNJ2O15056 1496 aa25.9■■□□□ 1.74
GADD45B-206ENST00000592937 GRIN2AQ12879 1464 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms