Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 PMPCB-204ENST00000444457 2385 ntTSL 218.76■□□□□ 0.598e-8■□□□□ 8.9
LARP4Q71RC2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.03■□□□□ 0.481e-6■□□□□ 8.9
LARP4Q71RC2 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.64■□□□□ 0.411e-6■□□□□ 8.9
LARP4Q71RC2 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.362e-7■□□□□ 8.9
LARP4Q71RC2 TRIM56-202ENST00000412507 1129 ntAPPRIS ALT2 TSL 1 (best)17.24■□□□□ 0.351e-6■□□□□ 8.9
LARP4Q71RC2 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.19■□□□□ 0.348e-8■□□□□ 8.9
LARP4Q71RC2 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.338e-8■□□□□ 8.9
LARP4Q71RC2 TMPO-205ENST00000546828 564 ntTSL 516.9■□□□□ 0.31e-6■□□□□ 8.9
LARP4Q71RC2 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.69■□□□□ 0.265e-9■□□□□ 8.9
LARP4Q71RC2 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.66■□□□□ 0.261e-6■□□□□ 8.9
LARP4Q71RC2 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.63■□□□□ 0.251e-6■□□□□ 8.9
LARP4Q71RC2 NAE1-218ENST00000567743 1460 ntTSL 1 (best)16.3■□□□□ 0.28e-8■□□□□ 8.9
LARP4Q71RC2 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.16■□□□□ 0.181e-6■□□□□ 8.9
LARP4Q71RC2 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.86■□□□□ 0.131e-6■□□□□ 8.9
LARP4Q71RC2 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.121e-6■□□□□ 8.9
LARP4Q71RC2 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.78■□□□□ 0.121e-6■□□□□ 8.9
LARP4Q71RC2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.118e-8■□□□□ 8.9
LARP4Q71RC2 UBC-208ENST00000540700 627 ntTSL 215.69■□□□□ 0.15e-9■□□□□ 8.9
LARP4Q71RC2 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.94□□□□□ -0.025e-9■□□□□ 8.9
LARP4Q71RC2 PABPC4-216ENST00000492468 2257 ntTSL 214.88□□□□□ -0.031e-6■□□□□ 8.9
LARP4Q71RC2 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.058e-8■□□□□ 8.9
LARP4Q71RC2 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.098e-8■□□□□ 8.9
LARP4Q71RC2 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.144e-10■□□□□ 8.9
LARP4Q71RC2 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.171e-6■□□□□ 8.9
LARP4Q71RC2 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.188e-8■□□□□ 8.9
LARP4Q71RC2 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.74□□□□□ -0.211e-6■□□□□ 8.9
LARP4Q71RC2 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.73□□□□□ -0.218e-8■□□□□ 8.9
LARP4Q71RC2 UBC-204ENST00000536661 624 ntTSL 213.62□□□□□ -0.235e-9■□□□□ 8.9
LARP4Q71RC2 PGRMC2-205ENST00000509070 430 ntTSL 213.54□□□□□ -0.241e-6■□□□□ 8.9
LARP4Q71RC2 CRELD1-205ENST00000435417 966 ntTSL 513.46□□□□□ -0.258e-8■□□□□ 8.9
LARP4Q71RC2 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC13.44□□□□□ -0.268e-8■□□□□ 8.9
LARP4Q71RC2 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.271e-6■□□□□ 8.9
LARP4Q71RC2 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.325e-9■□□□□ 8.9
LARP4Q71RC2 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.321e-6■□□□□ 8.9
LARP4Q71RC2 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC13.02□□□□□ -0.338e-8■□□□□ 8.9
LARP4Q71RC2 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC12.9□□□□□ -0.358e-8■□□□□ 8.9
LARP4Q71RC2 PABPC4-213ENST00000482028 633 ntTSL 212.8□□□□□ -0.361e-6■□□□□ 8.9
LARP4Q71RC2 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC12.77□□□□□ -0.371e-6■□□□□ 8.9
LARP4Q71RC2 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC12.64□□□□□ -0.398e-8■□□□□ 8.9
LARP4Q71RC2 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC12.64□□□□□ -0.391e-6■□□□□ 8.9
LARP4Q71RC2 CRELD1-209ENST00000482691 690 ntTSL 312.61□□□□□ -0.398e-8■□□□□ 8.9
LARP4Q71RC2 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.391e-6■□□□□ 8.9
LARP4Q71RC2 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41e-6■□□□□ 8.9
LARP4Q71RC2 PMPCB-203ENST00000443722 1323 ntTSL 512.08□□□□□ -0.488e-8■□□□□ 8.9
LARP4Q71RC2 TMPO-212ENST00000556029 4242 ntTSL 1 (best) BASIC12.07□□□□□ -0.481e-6■□□□□ 8.9
LARP4Q71RC2 LARP1-201ENST00000336314 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.561e-6■□□□□ 8.9
LARP4Q71RC2 CRELD1-210ENST00000489674 437 ntTSL 511.28□□□□□ -0.68e-8■□□□□ 8.9
LARP4Q71RC2 RPN2-208ENST00000470352 511 ntTSL 211.12□□□□□ -0.634e-13■□□□□ 8.9
LARP4Q71RC2 UBC-214ENST00000546271 559 ntTSL 410.93□□□□□ -0.665e-9■□□□□ 8.9
LARP4Q71RC2 CRELD1-208ENST00000467713 540 ntTSL 210.86□□□□□ -0.678e-8■□□□□ 8.9
LARP4Q71RC2 PABPC4-206ENST00000437136 876 ntTSL 510.84□□□□□ -0.671e-6■□□□□ 8.9
LARP4Q71RC2 RPN2-204ENST00000437329 520 ntTSL 310.58□□□□□ -0.724e-13■□□□□ 8.9
LARP4Q71RC2 CAPZA2-201ENST00000361183 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.728e-8■□□□□ 8.9
LARP4Q71RC2 ARID1A-204ENST00000430799 6521 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.741e-6■□□□□ 8.9
LARP4Q71RC2 UBC-213ENST00000546120 718 ntTSL 5 BASIC10.18□□□□□ -0.785e-9■□□□□ 8.9
LARP4Q71RC2 TRIM56-204ENST00000487252 735 ntTSL 310.15□□□□□ -0.781e-6■□□□□ 8.9
LARP4Q71RC2 RICTOR-206ENST00000510711 3126 ntTSL 29.75□□□□□ -0.851e-6■□□□□ 8.9
LARP4Q71RC2 SMC6-207ENST00000448223 5233 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.021e-6■□□□□ 8.9
LARP4Q71RC2 PABPC4-209ENST00000468476 3592 ntTSL 28.63□□□□□ -1.031e-6■□□□□ 8.9
LARP4Q71RC2 UBC-211ENST00000542416 517 ntTSL 48.06□□□□□ -1.125e-9■□□□□ 8.9
LARP4Q71RC2 REST-209ENST00000622863 1106 ntTSL 1 (best) BASIC8.01□□□□□ -1.131e-6■□□□□ 8.9
LARP4Q71RC2 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.151e-6■□□□□ 8.9
LARP4Q71RC2 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC7.82□□□□□ -1.161e-6■□□□□ 8.9
LARP4Q71RC2 NPM1-208ENST00000521672 597 ntTSL 57.69□□□□□ -1.186e-16■□□□□ 8.9
LARP4Q71RC2 RICTOR-209ENST00000514735 686 ntTSL 37.63□□□□□ -1.191e-6■□□□□ 8.9
LARP4Q71RC2 NAE1-217ENST00000567521 765 ntTSL 37.35□□□□□ -1.238e-8■□□□□ 8.9
LARP4Q71RC2 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC7.21□□□□□ -1.261e-6■□□□□ 8.9
LARP4Q71RC2 LINC01088-209ENST00000512130 525 ntTSL 37.13□□□□□ -1.271e-6■□□□□ 8.9
LARP4Q71RC2 CDK1-205ENST00000475504 1720 ntTSL 27.04□□□□□ -1.281e-6■□□□□ 8.9
LARP4Q71RC2 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.31e-6■□□□□ 8.9
LARP4Q71RC2 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC6.87□□□□□ -1.311e-6■□□□□ 8.9
LARP4Q71RC2 PGRMC2-202ENST00000394276 2858 ntTSL 2 BASIC6.83□□□□□ -1.321e-6■□□□□ 8.9
LARP4Q71RC2 PMPCB-207ENST00000469560 1615 ntTSL 26.77□□□□□ -1.338e-8■□□□□ 8.9
LARP4Q71RC2 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.333e-11■□□□□ 8.9
LARP4Q71RC2 CDK1-207ENST00000519078 723 ntTSL 36.7□□□□□ -1.341e-6■□□□□ 8.9
LARP4Q71RC2 LINC01088-206ENST00000510667 534 ntTSL 36.51□□□□□ -1.371e-6■□□□□ 8.9
LARP4Q71RC2 TMPO-206ENST00000547214 721 ntTSL 26.44□□□□□ -1.381e-6■□□□□ 8.9
LARP4Q71RC2 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.33□□□□□ -1.43e-11■□□□□ 8.9
LARP4Q71RC2 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC6.32□□□□□ -1.41e-6■□□□□ 8.9
LARP4Q71RC2 TMPO-213ENST00000556678 713 ntTSL 56.27□□□□□ -1.411e-6■□□□□ 8.9
LARP4Q71RC2 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC6.11□□□□□ -1.431e-6■□□□□ 8.9
LARP4Q71RC2 LINC01088-211ENST00000515597 664 ntTSL 1 (best)6.1□□□□□ -1.431e-6■□□□□ 8.9
LARP4Q71RC2 NPM1-205ENST00000518587 670 ntTSL 25.98□□□□□ -1.456e-16■□□□□ 8.9
LARP4Q71RC2 PSMA3-211ENST00000557087 654 ntTSL 35.97□□□□□ -1.451e-6■□□□□ 8.9
LARP4Q71RC2 LINC01088-210ENST00000513153 695 ntTSL 35.85□□□□□ -1.471e-6■□□□□ 8.9
LARP4Q71RC2 RICTOR-208ENST00000513566 1762 ntTSL 1 (best)5.81□□□□□ -1.481e-6■□□□□ 8.9
LARP4Q71RC2 CAPZA2-213ENST00000496161 701 ntTSL 25.76□□□□□ -1.498e-8■□□□□ 8.9
LARP4Q71RC2 LINC01088-204ENST00000507761 842 ntTSL 25.72□□□□□ -1.491e-6■□□□□ 8.9
LARP4Q71RC2 NOP58-206ENST00000478508 599 ntTSL 25.67□□□□□ -1.54e-10■□□□□ 8.9
LARP4Q71RC2 DNAJC8-202ENST00000470967 560 ntTSL 25.39□□□□□ -1.551e-6■□□□□ 8.9
LARP4Q71RC2 CAPZA2-204ENST00000426421 1214 ntTSL 55.3□□□□□ -1.568e-8■□□□□ 8.9
LARP4Q71RC2 TMPO-211ENST00000552831 743 ntTSL 25.29□□□□□ -1.561e-6■□□□□ 8.9
LARP4Q71RC2 CAPZA2-209ENST00000465607 687 ntTSL 55.21□□□□□ -1.588e-8■□□□□ 8.9
LARP4Q71RC2 CAPZA2-205ENST00000449080 814 ntTSL 54.85□□□□□ -1.638e-8■□□□□ 8.9
LARP4Q71RC2 RPN2-206ENST00000456400 453 ntTSL 34.73□□□□□ -1.653e-13■□□□□ 8.9
LARP4Q71RC2 CDK1-208ENST00000519760 276 ntTSL 34.53□□□□□ -1.681e-6■□□□□ 8.9
LARP4Q71RC2 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.721e-6■□□□□ 8.9
LARP4Q71RC2 ARID1A-216ENST00000637465 699 ntTSL 54.28□□□□□ -1.721e-6■□□□□ 8.9
LARP4Q71RC2 NMU-204ENST00000509371 283 ntTSL 1 (best)4.05□□□□□ -1.768e-8■□□□□ 8.9
LARP4Q71RC2 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.99□□□□□ -1.931e-6■□□□□ 8.9
Retrieved 100 of 15,922 protein–RNA pairs in 381.2 ms