RNA–Protein interactions for RNA: ENST00000546828.6

TMPO-205, Transcript of thymopoietin, humanhuman

TSL 5

Gene TMPO, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPO-205ENST00000546828 NISCHQ9Y2I1 1504 aa45.36■■■■■ 4.85
TMPO-205ENST00000546828 ABCC9O60706 1549 aa41.55■■■■■ 4.24
TMPO-205ENST00000546828 CCDC180Q9P1Z9 1646 aa40.98■■■■■ 4.15
TMPO-205ENST00000546828 DNAJC5BQ9UF47 199 aa39.56■■■■□ 3.92
TMPO-205ENST00000546828 RB1CC1Q8TDY2 1594 aa39.3■■■■□ 3.88
TMPO-205ENST00000546828 NACADO15069 1562 aa38.9■■■■□ 3.82
TMPO-205ENST00000546828 PABPN1Q86U42 306 aaKnown RBP eCLIP38.61■■■■□ 3.77
TMPO-205ENST00000546828 DCAF8L2P0C7V8 631 aa38.55■■■■□ 3.76
TMPO-205ENST00000546828 UNC13AQ9UPW8 1703 aa38.46■■■■□ 3.75
TMPO-205ENST00000546828 BICRAQ9NZM4 1560 aa38.19■■■■□ 3.7
TMPO-205ENST00000546828 MYO15BQ96JP2 1530 aa38.17■■■■□ 3.7
TMPO-205ENST00000546828 SHROOM4Q9ULL8 1493 aa37.6■■■■□ 3.61
TMPO-205ENST00000546828 CC2D2AQ9P2K1 1620 aa37.54■■■■□ 3.6
TMPO-205ENST00000546828 CECR2Q9BXF3 1484 aa37.51■■■■□ 3.59
TMPO-205ENST00000546828 DCAF1Q9Y4B6 1507 aa37.45■■■■□ 3.59
TMPO-205ENST00000546828 ZCCHC6Q5VYS8 1495 aaKnown RBP37.45■■■■□ 3.59
TMPO-205ENST00000546828 EIF4G1Q04637 1599 aaKnown RBP37.29■■■■□ 3.56
TMPO-205ENST00000546828 SCRIBQ14160 1630 aa37.27■■■■□ 3.56
TMPO-205ENST00000546828 DNAJC5Q9H3Z4 198 aa36.79■■■■□ 3.48
TMPO-205ENST00000546828 CUX2O14529 1486 aa36.09■■■■□ 3.37
TMPO-205ENST00000546828 NCAPD3P42695 1498 aa35.92■■■■□ 3.34
TMPO-205ENST00000546828 ERCC6Q03468 1493 aa35.92■■■■□ 3.34
TMPO-205ENST00000546828 ATAD2BQ9ULI0 1458 aa35.72■■■■□ 3.31
TMPO-205ENST00000546828 SMARCA2P51531 1590 aa35.58■■■■□ 3.29
TMPO-205ENST00000546828 HMGXB3Q12766 1538 aa35.57■■■■□ 3.29
TMPO-205ENST00000546828 NESP48681 1621 aa35.53■■■■□ 3.28
TMPO-205ENST00000546828 SMARCA4P51532 1647 aa35.52■■■■□ 3.28
TMPO-205ENST00000546828 BAZ1BQ9UIG0 1483 aaKnown RBP35.32■■■■□ 3.24
TMPO-205ENST00000546828 THOC2Q8NI27 1593 aaKnown RBP35.3■■■■□ 3.24
TMPO-205ENST00000546828 BAZ1AQ9NRL2 1556 aaPredicted RBP35.25■■■■□ 3.23
TMPO-205ENST00000546828 LAMC3Q9Y6N6 1575 aa35.21■■■■□ 3.23
TMPO-205ENST00000546828 PEG3Q9GZU2 1588 aa35.19■■■■□ 3.22
TMPO-205ENST00000546828 KIF21AQ7Z4S6 1674 aa35.08■■■■□ 3.21
TMPO-205ENST00000546828 PDS5BQ9NTI5 1447 aa35.02■■■■□ 3.2
TMPO-205ENST00000546828 MROH2BQ7Z745 1585 aa34.94■■■■□ 3.18
TMPO-205ENST00000546828 TRIM41Q8WV44 630 aa34.89■■■■□ 3.18
TMPO-205ENST00000546828 CADPSQ9ULU8 1353 aa34.79■■■■□ 3.16
TMPO-205ENST00000546828 MRC2Q9UBG0 1479 aa34.74■■■■□ 3.15
TMPO-205ENST00000546828 WDR62O43379 1518 aa34.68■■■■□ 3.14
TMPO-205ENST00000546828 WIZO95785 1651 aa34.5■■■■□ 3.11
TMPO-205ENST00000546828 CEP164Q9UPV0 1460 aa34.47■■■■□ 3.11
TMPO-205ENST00000546828 FANCD2Q9BXW9 1451 aa34.39■■■■□ 3.1
TMPO-205ENST00000546828 OSCARQ8IYS5 282 aa34.36■■■■□ 3.09
TMPO-205ENST00000546828 CFTRP13569 1480 aa34.27■■■■□ 3.08
TMPO-205ENST00000546828 URB2Q14146 1524 aaKnown RBP34.14■■■■□ 3.06
TMPO-205ENST00000546828 TOP2AP11388 1531 aaKnown RBP34■■■■□ 3.03
TMPO-205ENST00000546828 RSF1Q96T23 1441 aaPredicted RBP34■■■■□ 3.03
TMPO-205ENST00000546828 RIMBP3CA6NJZ7 1639 aa33.97■■■■□ 3.03
TMPO-205ENST00000546828 RIMBP3BA6NNM3 1639 aa33.97■■■■□ 3.03
TMPO-205ENST00000546828 RIMBP3Q9UFD9 1639 aa33.97■■■■□ 3.03
TMPO-205ENST00000546828 PRDM2Q13029 1718 aa33.9■■■■□ 3.02
TMPO-205ENST00000546828 IFT140Q96RY7 1462 aa33.82■■■■□ 3.01
TMPO-205ENST00000546828 ZNF608Q9ULD9 1512 aaPredicted RBP33.82■■■■□ 3
TMPO-205ENST00000546828 ARHGEF11O15085 1522 aa33.79■■■■□ 3
TMPO-205ENST00000546828 TOPBP1Q92547 1522 aa33.67■■■□□ 2.98
TMPO-205ENST00000546828 CCDC88BA6NC98 1476 aa33.64■■■□□ 2.98
TMPO-205ENST00000546828 EIF4G3O43432 1585 aaKnown RBP33.6■■■□□ 2.97
TMPO-205ENST00000546828 CYB5RLQ6IPT4 315 aa33.59■■■□□ 2.97
TMPO-205ENST00000546828 ABCC8Q09428 1581 aa33.58■■■□□ 2.97
TMPO-205ENST00000546828 CHD1O14646 1710 aa33.49■■■□□ 2.95
TMPO-205ENST00000546828 DNMBPQ6XZF7 1577 aa33.49■■■□□ 2.95
TMPO-205ENST00000546828 AQRO60306 1485 aaKnown RBP eCLIP33.44■■■□□ 2.94
TMPO-205ENST00000546828 TARBP1Q13395 1621 aaKnown RBP33.42■■■□□ 2.94
TMPO-205ENST00000546828 TRHP20396 242 aaPredicted RBP33.41■■■□□ 2.94
TMPO-205ENST00000546828 ARAP1Q96P48 1450 aa33.4■■■□□ 2.94
TMPO-205ENST00000546828 FBLN2P98095 1184 aa33.34■■■□□ 2.93
TMPO-205ENST00000546828 POLA1P09884 1462 aaPredicted RBP33.28■■■□□ 2.92
TMPO-205ENST00000546828 RAD54L2Q9Y4B4 1467 aa33.18■■■□□ 2.9
TMPO-205ENST00000546828 TDRD9Q8NDG6 1382 aaKnown RBP33.14■■■□□ 2.9
TMPO-205ENST00000546828 SOGA1O94964 1423 aa33.13■■■□□ 2.89
TMPO-205ENST00000546828 CLASP1Q7Z460 1538 aa33.07■■■□□ 2.89
TMPO-205ENST00000546828 SNAPC4Q5SXM2 1469 aa33.07■■■□□ 2.88
TMPO-205ENST00000546828 WDR97A6NE52 1622 aa33.06■■■□□ 2.88
TMPO-205ENST00000546828 CHMP7Q8WUX9 453 aaPredicted RBP33.01■■■□□ 2.87
TMPO-205ENST00000546828 SYNJ1O43426 1573 aa33■■■□□ 2.87
TMPO-205ENST00000546828 FGD5Q6ZNL6 1462 aa32.98■■■□□ 2.87
TMPO-205ENST00000546828 MAGI1Q96QZ7 1491 aaPredicted RBP32.97■■■□□ 2.87
TMPO-205ENST00000546828 GRIN2BQ13224 1484 aa32.91■■■□□ 2.86
TMPO-205ENST00000546828 AEBP2Q6ZN18 517 aaPredicted RBP32.89■■■□□ 2.86
TMPO-205ENST00000546828 SYNJ2O15056 1496 aa32.87■■■□□ 2.85
TMPO-205ENST00000546828 CUX1P39880 1505 aa32.87■■■□□ 2.85
TMPO-205ENST00000546828 GAPVD1Q14C86 1478 aa32.77■■■□□ 2.84
TMPO-205ENST00000546828 PBRM1Q86U86 1689 aa32.75■■■□□ 2.83
TMPO-205ENST00000546828 SUPT5HO00267 1087 aaKnown RBP32.66■■■□□ 2.82
TMPO-205ENST00000546828 ABCA5Q8WWZ7 1642 aa32.59■■■□□ 2.81
TMPO-205ENST00000546828 ABCA10Q8WWZ4 1543 aa32.58■■■□□ 2.81
TMPO-205ENST00000546828 ERCC6L2Q5T890 1561 aa32.51■■■□□ 2.79
TMPO-205ENST00000546828 GRIN2AQ12879 1464 aa32.48■■■□□ 2.79
TMPO-205ENST00000546828 CEP170Q5SW79 1584 aa32.42■■■□□ 2.78
TMPO-205ENST00000546828 NUP160Q12769 1436 aa32.41■■■□□ 2.78
TMPO-205ENST00000546828 ADAMTS12P58397 1594 aa32.38■■■□□ 2.77
TMPO-205ENST00000546828 SHROOM2Q13796 1616 aa32.33■■■□□ 2.77
TMPO-205ENST00000546828 WRNQ14191 1432 aaPredicted RBP eCLIP32.32■■■□□ 2.76
TMPO-205ENST00000546828 KIF13AQ9H1H9 1805 aa32.28■■■□□ 2.76
TMPO-205ENST00000546828 FHAD1B1AJZ9 1412 aa32.27■■■□□ 2.76
TMPO-205ENST00000546828 BIVM-ERCC5R4GMW8 1640 aa32.18■■■□□ 2.74
TMPO-205ENST00000546828 TOP2BQ02880 1626 aa32.18■■■□□ 2.74
TMPO-205ENST00000546828 ERICH3Q5RHP9 1530 aa32.16■■■□□ 2.74
TMPO-205ENST00000546828 PRG4Q92954 1404 aaPredicted RBP32.13■■■□□ 2.73
TMPO-205ENST00000546828 JPH4Q96JJ6 628 aa32.1■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms