RNA–Protein interactions for RNA: ENST00000437329.5

RPN2-204, Transcript of ribophorin II, humanhuman

TSL 3

Gene RPN2, Length 520 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN2-204ENST00000437329 NISCHQ9Y2I1 1504 aa28.64■■■□□ 2.18
RPN2-204ENST00000437329 CCDC180Q9P1Z9 1646 aa25.55■■□□□ 1.68
RPN2-204ENST00000437329 ABCC9O60706 1549 aa25.32■■□□□ 1.64
RPN2-204ENST00000437329 RB1CC1Q8TDY2 1594 aa24.17■■□□□ 1.46
RPN2-204ENST00000437329 DCAF8L2P0C7V8 631 aa24.09■■□□□ 1.45
RPN2-204ENST00000437329 NACADO15069 1562 aa24.07■■□□□ 1.44
RPN2-204ENST00000437329 MYO15BQ96JP2 1530 aa23.8■■□□□ 1.4
RPN2-204ENST00000437329 ZCCHC6Q5VYS8 1495 aaKnown RBP23.8■■□□□ 1.4
RPN2-204ENST00000437329 UNC13AQ9UPW8 1703 aa23.72■■□□□ 1.39
RPN2-204ENST00000437329 PABPN1Q86U42 306 aaKnown RBP eCLIP23.63■■□□□ 1.37
RPN2-204ENST00000437329 DCAF1Q9Y4B6 1507 aa23.63■■□□□ 1.37
RPN2-204ENST00000437329 BICRAQ9NZM4 1560 aa23.51■■□□□ 1.35
RPN2-204ENST00000437329 DNAJC5BQ9UF47 199 aa23.49■■□□□ 1.35
RPN2-204ENST00000437329 SCRIBQ14160 1630 aa23.37■■□□□ 1.33
RPN2-204ENST00000437329 SHROOM4Q9ULL8 1493 aa23.11■■□□□ 1.29
RPN2-204ENST00000437329 EIF4G1Q04637 1599 aaKnown RBP22.89■■□□□ 1.25
RPN2-204ENST00000437329 CC2D2AQ9P2K1 1620 aa22.87■■□□□ 1.25
RPN2-204ENST00000437329 CECR2Q9BXF3 1484 aa22.74■■□□□ 1.23
RPN2-204ENST00000437329 SMARCA4P51532 1647 aa22.3■■□□□ 1.16
RPN2-204ENST00000437329 NCAPD3P42695 1498 aa22.22■■□□□ 1.15
RPN2-204ENST00000437329 ATAD2BQ9ULI0 1458 aa22.22■■□□□ 1.15
RPN2-204ENST00000437329 BAZ1AQ9NRL2 1556 aaPredicted RBP22.2■■□□□ 1.14
RPN2-204ENST00000437329 SMARCA2P51531 1590 aa22.15■■□□□ 1.14
RPN2-204ENST00000437329 MROH2BQ7Z745 1585 aa22.11■■□□□ 1.13
RPN2-204ENST00000437329 HMGXB3Q12766 1538 aa22.08■■□□□ 1.13
RPN2-204ENST00000437329 PEG3Q9GZU2 1588 aa22.04■■□□□ 1.12
RPN2-204ENST00000437329 BAZ1BQ9UIG0 1483 aaKnown RBP22.03■■□□□ 1.12
RPN2-204ENST00000437329 WIZO95785 1651 aa21.88■■□□□ 1.09
RPN2-204ENST00000437329 NESP48681 1621 aa21.85■■□□□ 1.09
RPN2-204ENST00000437329 ERCC6Q03468 1493 aa21.81■■□□□ 1.08
RPN2-204ENST00000437329 RSF1Q96T23 1441 aaPredicted RBP21.74■■□□□ 1.07
RPN2-204ENST00000437329 LAMC3Q9Y6N6 1575 aa21.68■■□□□ 1.06
RPN2-204ENST00000437329 CUX2O14529 1486 aa21.62■■□□□ 1.05
RPN2-204ENST00000437329 KIF21AQ7Z4S6 1674 aa21.59■■□□□ 1.05
RPN2-204ENST00000437329 TOP2AP11388 1531 aaKnown RBP21.58■■□□□ 1.04
RPN2-204ENST00000437329 CADPSQ9ULU8 1353 aa21.57■■□□□ 1.04
RPN2-204ENST00000437329 THOC2Q8NI27 1593 aaKnown RBP21.54■■□□□ 1.04
RPN2-204ENST00000437329 PDS5BQ9NTI5 1447 aa21.53■■□□□ 1.04
RPN2-204ENST00000437329 CFTRP13569 1480 aa21.39■■□□□ 1.01
RPN2-204ENST00000437329 MRC2Q9UBG0 1479 aa21.35■■□□□ 1.01
RPN2-204ENST00000437329 CCDC88BA6NC98 1476 aa21.34■■□□□ 1.01
RPN2-204ENST00000437329 FANCD2Q9BXW9 1451 aa21.34■■□□□ 1.01
RPN2-204ENST00000437329 CEP164Q9UPV0 1460 aa21.32■■□□□ 1
RPN2-204ENST00000437329 WDR62O43379 1518 aa21.29■■□□□ 1
RPN2-204ENST00000437329 DNAJC5Q9H3Z4 198 aa21.28■■□□□ 1
RPN2-204ENST00000437329 PRDM2Q13029 1718 aa21.24■□□□□ 0.99
RPN2-204ENST00000437329 URB2Q14146 1524 aaKnown RBP21.17■□□□□ 0.98
RPN2-204ENST00000437329 SUPT5HO00267 1087 aaKnown RBP21.05■□□□□ 0.96
RPN2-204ENST00000437329 TOPBP1Q92547 1522 aa20.98■□□□□ 0.95
RPN2-204ENST00000437329 DNMBPQ6XZF7 1577 aa20.92■□□□□ 0.94
RPN2-204ENST00000437329 ABCC8Q09428 1581 aa20.89■□□□□ 0.94
RPN2-204ENST00000437329 ZNF608Q9ULD9 1512 aaPredicted RBP20.88■□□□□ 0.93
RPN2-204ENST00000437329 IFT140Q96RY7 1462 aa20.88■□□□□ 0.93
RPN2-204ENST00000437329 POLA1P09884 1462 aaPredicted RBP20.79■□□□□ 0.92
RPN2-204ENST00000437329 TARBP1Q13395 1621 aaKnown RBP20.78■□□□□ 0.92
RPN2-204ENST00000437329 EIF4G3O43432 1585 aaKnown RBP20.76■□□□□ 0.91
RPN2-204ENST00000437329 CUX1P39880 1505 aa20.74■□□□□ 0.91
RPN2-204ENST00000437329 RAD54L2Q9Y4B4 1467 aa20.74■□□□□ 0.91
RPN2-204ENST00000437329 AQRO60306 1485 aaKnown RBP eCLIP20.71■□□□□ 0.915e-7■■■■■ 52.5
RPN2-204ENST00000437329 FGD5Q6ZNL6 1462 aa20.71■□□□□ 0.91
RPN2-204ENST00000437329 OSCARQ8IYS5 282 aa20.69■□□□□ 0.9
RPN2-204ENST00000437329 SOGA1O94964 1423 aa20.69■□□□□ 0.9
RPN2-204ENST00000437329 TDRD9Q8NDG6 1382 aaKnown RBP20.63■□□□□ 0.89
RPN2-204ENST00000437329 CHD1O14646 1710 aa20.58■□□□□ 0.88
RPN2-204ENST00000437329 WDR97A6NE52 1622 aa20.56■□□□□ 0.88
RPN2-204ENST00000437329 TRIM41Q8WV44 630 aa20.53■□□□□ 0.88
RPN2-204ENST00000437329 FBLN2P98095 1184 aa20.52■□□□□ 0.88
RPN2-204ENST00000437329 SYNJ1O43426 1573 aa20.51■□□□□ 0.87
RPN2-204ENST00000437329 SNAPC4Q5SXM2 1469 aa20.5■□□□□ 0.87
RPN2-204ENST00000437329 WRNQ14191 1432 aaPredicted RBP eCLIP20.49■□□□□ 0.87
RPN2-204ENST00000437329 BIVM-ERCC5R4GMW8 1640 aa20.49■□□□□ 0.87
RPN2-204ENST00000437329 TOP2BQ02880 1626 aa20.48■□□□□ 0.87
RPN2-204ENST00000437329 GRIN2BQ13224 1484 aa20.46■□□□□ 0.87
RPN2-204ENST00000437329 ABCA10Q8WWZ4 1543 aa20.46■□□□□ 0.87
RPN2-204ENST00000437329 PBRM1Q86U86 1689 aa20.45■□□□□ 0.86
RPN2-204ENST00000437329 RIMBP3CA6NJZ7 1639 aa20.45■□□□□ 0.86
RPN2-204ENST00000437329 RIMBP3BA6NNM3 1639 aa20.45■□□□□ 0.86
RPN2-204ENST00000437329 RIMBP3Q9UFD9 1639 aa20.45■□□□□ 0.86
RPN2-204ENST00000437329 GAPVD1Q14C86 1478 aa20.43■□□□□ 0.86
RPN2-204ENST00000437329 ABCA5Q8WWZ7 1642 aa20.43■□□□□ 0.86
RPN2-204ENST00000437329 MAGI1Q96QZ7 1491 aaPredicted RBP20.42■□□□□ 0.86
RPN2-204ENST00000437329 ARHGEF11O15085 1522 aa20.39■□□□□ 0.85
RPN2-204ENST00000437329 CHMP7Q8WUX9 453 aaPredicted RBP20.38■□□□□ 0.85
RPN2-204ENST00000437329 SYNJ2O15056 1496 aa20.36■□□□□ 0.85
RPN2-204ENST00000437329 CLASP1Q7Z460 1538 aa20.3■□□□□ 0.84
RPN2-204ENST00000437329 ADAMTS12P58397 1594 aa20.25■□□□□ 0.83
RPN2-204ENST00000437329 CYB5RLQ6IPT4 315 aa20.24■□□□□ 0.83
RPN2-204ENST00000437329 ARAP1Q96P48 1450 aa20.23■□□□□ 0.83
RPN2-204ENST00000437329 GRIN2AQ12879 1464 aa20.21■□□□□ 0.83
RPN2-204ENST00000437329 ERICH3Q5RHP9 1530 aa20.2■□□□□ 0.82
RPN2-204ENST00000437329 FHAD1B1AJZ9 1412 aa20.18■□□□□ 0.82
RPN2-204ENST00000437329 CEP170Q5SW79 1584 aa20.16■□□□□ 0.82
RPN2-204ENST00000437329 NUP160Q12769 1436 aa20.11■□□□□ 0.81
RPN2-204ENST00000437329 ERCC6L2Q5T890 1561 aa20.07■□□□□ 0.8
RPN2-204ENST00000437329 KIF27Q86VH2 1401 aa20.06■□□□□ 0.8
RPN2-204ENST00000437329 IGF1RP08069 1367 aa20.04■□□□□ 0.8
RPN2-204ENST00000437329 SHROOM2Q13796 1616 aa20.02■□□□□ 0.79
RPN2-204ENST00000437329 CUL7Q14999 1698 aa19.98■□□□□ 0.79
RPN2-204ENST00000437329 RUSC2Q8N2Y8 1516 aa19.97■□□□□ 0.79
RPN2-204ENST00000437329 PRG4Q92954 1404 aaPredicted RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms