RNA–Protein interactions for RNA: ENST00000437136.5

PABPC4-206, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-206ENST00000437136 NISCHQ9Y2I1 1504 aa30.88■■■□□ 2.53
PABPC4-206ENST00000437136 ABCC9O60706 1549 aa28.53■■■□□ 2.16
PABPC4-206ENST00000437136 CCDC180Q9P1Z9 1646 aa27.83■■■□□ 2.05
PABPC4-206ENST00000437136 DNAJC5BQ9UF47 199 aa27.26■■□□□ 1.95
PABPC4-206ENST00000437136 RB1CC1Q8TDY2 1594 aa26.82■■□□□ 1.88
PABPC4-206ENST00000437136 DCAF8L2P0C7V8 631 aa26.57■■□□□ 1.84
PABPC4-206ENST00000437136 PABPN1Q86U42 306 aaKnown RBP eCLIP26.57■■□□□ 1.84
PABPC4-206ENST00000437136 NACADO15069 1562 aa26.49■■□□□ 1.83
PABPC4-206ENST00000437136 UNC13AQ9UPW8 1703 aa26.17■■□□□ 1.78
PABPC4-206ENST00000437136 BICRAQ9NZM4 1560 aa26.05■■□□□ 1.76
PABPC4-206ENST00000437136 MYO15BQ96JP2 1530 aa25.88■■□□□ 1.73
PABPC4-206ENST00000437136 CECR2Q9BXF3 1484 aa25.72■■□□□ 1.71
PABPC4-206ENST00000437136 CC2D2AQ9P2K1 1620 aa25.67■■□□□ 1.7
PABPC4-206ENST00000437136 SHROOM4Q9ULL8 1493 aa25.54■■□□□ 1.68
PABPC4-206ENST00000437136 SCRIBQ14160 1630 aa25.48■■□□□ 1.67
PABPC4-206ENST00000437136 EIF4G1Q04637 1599 aaKnown RBP25.48■■□□□ 1.67
PABPC4-206ENST00000437136 ZCCHC6Q5VYS8 1495 aaKnown RBP25.46■■□□□ 1.67
PABPC4-206ENST00000437136 DCAF1Q9Y4B6 1507 aa25.38■■□□□ 1.65
PABPC4-206ENST00000437136 DNAJC5Q9H3Z4 198 aa25.36■■□□□ 1.65
PABPC4-206ENST00000437136 CUX2O14529 1486 aa24.68■■□□□ 1.54
PABPC4-206ENST00000437136 ERCC6Q03468 1493 aa24.66■■□□□ 1.54
PABPC4-206ENST00000437136 NCAPD3P42695 1498 aa24.49■■□□□ 1.51
PABPC4-206ENST00000437136 ATAD2BQ9ULI0 1458 aa24.38■■□□□ 1.49
PABPC4-206ENST00000437136 NESP48681 1621 aa24.35■■□□□ 1.49
PABPC4-206ENST00000437136 SMARCA2P51531 1590 aa24.23■■□□□ 1.47
PABPC4-206ENST00000437136 HMGXB3Q12766 1538 aa24.2■■□□□ 1.47
PABPC4-206ENST00000437136 SMARCA4P51532 1647 aa24.18■■□□□ 1.46
PABPC4-206ENST00000437136 TRIM41Q8WV44 630 aa24.17■■□□□ 1.46
PABPC4-206ENST00000437136 BAZ1BQ9UIG0 1483 aaKnown RBP24.13■■□□□ 1.45
PABPC4-206ENST00000437136 THOC2Q8NI27 1593 aaKnown RBP24.09■■□□□ 1.45
PABPC4-206ENST00000437136 BAZ1AQ9NRL2 1556 aaPredicted RBP23.99■■□□□ 1.43
PABPC4-206ENST00000437136 LAMC3Q9Y6N6 1575 aa23.99■■□□□ 1.43
PABPC4-206ENST00000437136 PDS5BQ9NTI5 1447 aa23.94■■□□□ 1.42
PABPC4-206ENST00000437136 KIF21AQ7Z4S6 1674 aa23.94■■□□□ 1.42
PABPC4-206ENST00000437136 PEG3Q9GZU2 1588 aa23.89■■□□□ 1.41
PABPC4-206ENST00000437136 MROH2BQ7Z745 1585 aa23.83■■□□□ 1.41
PABPC4-206ENST00000437136 CADPSQ9ULU8 1353 aa23.77■■□□□ 1.4
PABPC4-206ENST00000437136 MRC2Q9UBG0 1479 aa23.75■■□□□ 1.39
PABPC4-206ENST00000437136 WDR62O43379 1518 aa23.66■■□□□ 1.38
PABPC4-206ENST00000437136 OSCARQ8IYS5 282 aa23.6■■□□□ 1.37
PABPC4-206ENST00000437136 CEP164Q9UPV0 1460 aa23.56■■□□□ 1.36
PABPC4-206ENST00000437136 WIZO95785 1651 aa23.52■■□□□ 1.36
PABPC4-206ENST00000437136 FANCD2Q9BXW9 1451 aa23.5■■□□□ 1.35
PABPC4-206ENST00000437136 CFTRP13569 1480 aa23.36■■□□□ 1.33
PABPC4-206ENST00000437136 URB2Q14146 1524 aaKnown RBP23.33■■□□□ 1.32
PABPC4-206ENST00000437136 RIMBP3CA6NJZ7 1639 aa23.26■■□□□ 1.31
PABPC4-206ENST00000437136 RIMBP3BA6NNM3 1639 aa23.26■■□□□ 1.31
PABPC4-206ENST00000437136 RIMBP3Q9UFD9 1639 aa23.26■■□□□ 1.31
PABPC4-206ENST00000437136 ZNF608Q9ULD9 1512 aaPredicted RBP23.16■■□□□ 1.3
PABPC4-206ENST00000437136 RSF1Q96T23 1441 aaPredicted RBP23.16■■□□□ 1.3
PABPC4-206ENST00000437136 CYB5RLQ6IPT4 315 aa23.15■■□□□ 1.3
PABPC4-206ENST00000437136 ARHGEF11O15085 1522 aa23.14■■□□□ 1.3
PABPC4-206ENST00000437136 TOP2AP11388 1531 aaKnown RBP23.14■■□□□ 1.3
PABPC4-206ENST00000437136 TRHP20396 242 aaPredicted RBP23.09■■□□□ 1.29
PABPC4-206ENST00000437136 IFT140Q96RY7 1462 aa23.09■■□□□ 1.29
PABPC4-206ENST00000437136 TOPBP1Q92547 1522 aa22.98■■□□□ 1.27
PABPC4-206ENST00000437136 FBLN2P98095 1184 aa22.98■■□□□ 1.27
PABPC4-206ENST00000437136 PRDM2Q13029 1718 aa22.97■■□□□ 1.27
PABPC4-206ENST00000437136 CCDC88BA6NC98 1476 aa22.95■■□□□ 1.26
PABPC4-206ENST00000437136 EIF4G3O43432 1585 aaKnown RBP22.94■■□□□ 1.26
PABPC4-206ENST00000437136 AQRO60306 1485 aaKnown RBP eCLIP22.92■■□□□ 1.267e-8■■■■■ 31.5
PABPC4-206ENST00000437136 ARAP1Q96P48 1450 aa22.89■■□□□ 1.25
PABPC4-206ENST00000437136 CHD1O14646 1710 aa22.87■■□□□ 1.25
PABPC4-206ENST00000437136 ABCC8Q09428 1581 aa22.86■■□□□ 1.25
PABPC4-206ENST00000437136 DNMBPQ6XZF7 1577 aa22.82■■□□□ 1.24
PABPC4-206ENST00000437136 AEBP2Q6ZN18 517 aaPredicted RBP22.78■■□□□ 1.24
PABPC4-206ENST00000437136 TARBP1Q13395 1621 aaKnown RBP22.78■■□□□ 1.24
PABPC4-206ENST00000437136 TDRD9Q8NDG6 1382 aaKnown RBP22.72■■□□□ 1.23
PABPC4-206ENST00000437136 POLA1P09884 1462 aaPredicted RBP22.72■■□□□ 1.23
PABPC4-206ENST00000437136 RAD54L2Q9Y4B4 1467 aa22.71■■□□□ 1.23
PABPC4-206ENST00000437136 SOGA1O94964 1423 aa22.66■■□□□ 1.22
PABPC4-206ENST00000437136 CHMP7Q8WUX9 453 aaPredicted RBP22.66■■□□□ 1.22
PABPC4-206ENST00000437136 SNAPC4Q5SXM2 1469 aa22.63■■□□□ 1.21
PABPC4-206ENST00000437136 CLASP1Q7Z460 1538 aa22.57■■□□□ 1.2
PABPC4-206ENST00000437136 SYNJ1O43426 1573 aa22.54■■□□□ 1.2
PABPC4-206ENST00000437136 FGD5Q6ZNL6 1462 aa22.53■■□□□ 1.2
PABPC4-206ENST00000437136 MAGI1Q96QZ7 1491 aaPredicted RBP22.49■■□□□ 1.19
PABPC4-206ENST00000437136 GRIN2BQ13224 1484 aa22.47■■□□□ 1.19
PABPC4-206ENST00000437136 SYNJ2O15056 1496 aa22.44■■□□□ 1.18
PABPC4-206ENST00000437136 GAPVD1Q14C86 1478 aa22.44■■□□□ 1.18
PABPC4-206ENST00000437136 WDR97A6NE52 1622 aa22.42■■□□□ 1.18
PABPC4-206ENST00000437136 CUX1P39880 1505 aa22.41■■□□□ 1.18
PABPC4-206ENST00000437136 PBRM1Q86U86 1689 aa22.3■■□□□ 1.16
PABPC4-206ENST00000437136 ERCC6L2Q5T890 1561 aa22.27■■□□□ 1.16
PABPC4-206ENST00000437136 ABCA10Q8WWZ4 1543 aa22.19■■□□□ 1.14
PABPC4-206ENST00000437136 GRIN2AQ12879 1464 aa22.18■■□□□ 1.14
PABPC4-206ENST00000437136 ABCA5Q8WWZ7 1642 aa22.17■■□□□ 1.14
PABPC4-206ENST00000437136 CEP170Q5SW79 1584 aa22.14■■□□□ 1.13
PABPC4-206ENST00000437136 NUP160Q12769 1436 aa22.1■■□□□ 1.13
PABPC4-206ENST00000437136 WRNQ14191 1432 aaPredicted RBP eCLIP22.06■■□□□ 1.12
PABPC4-206ENST00000437136 ADAMTS12P58397 1594 aa22.06■■□□□ 1.12
PABPC4-206ENST00000437136 KIF13AQ9H1H9 1805 aa22.02■■□□□ 1.12
PABPC4-206ENST00000437136 FAM69CQ0P6D2 419 aa22.02■■□□□ 1.12
PABPC4-206ENST00000437136 FHAD1B1AJZ9 1412 aa22.02■■□□□ 1.12
PABPC4-206ENST00000437136 PRG4Q92954 1404 aaPredicted RBP22.01■■□□□ 1.11
PABPC4-206ENST00000437136 SHROOM2Q13796 1616 aa22.01■■□□□ 1.11
PABPC4-206ENST00000437136 JPH4Q96JJ6 628 aa21.98■■□□□ 1.11
PABPC4-206ENST00000437136 NPM1P06748 294 aaKnown RBP eCLIP21.97■■□□□ 1.11
PABPC4-206ENST00000437136 SUPT5HO00267 1087 aaKnown RBP21.94■■□□□ 1.1
PABPC4-206ENST00000437136 ABCC10Q5T3U5 1492 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms