RNA–Protein interactions for RNA: ENST00000510667.5

LINC01088-206, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 534 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-206ENST00000510667 AEBP2Q6ZN18 517 aaPredicted RBP27.18■■□□□ 1.94
LINC01088-206ENST00000510667 CHIC1Q5VXU3 224 aa26.25■■□□□ 1.79
LINC01088-206ENST00000510667 PHF23Q9BUL5 403 aaPredicted RBP23.12■■□□□ 1.29
LINC01088-206ENST00000510667 SENP3Q9H4L4 574 aaPredicted RBP22.99■■□□□ 1.27
LINC01088-206ENST00000510667 FOXD1Q16676 465 aa21.43■■□□□ 1.02
LINC01088-206ENST00000510667 PLPPR3Q6T4P5 718 aa21.17■□□□□ 0.98
LINC01088-206ENST00000510667 PPP6R1Q9UPN7 881 aa20.48■□□□□ 0.87
LINC01088-206ENST00000510667 ADRA2BP18089 450 aa20.44■□□□□ 0.86
LINC01088-206ENST00000510667 PIAS4Q8N2W9 510 aaPredicted RBP20.14■□□□□ 0.81
LINC01088-206ENST00000510667 MSH5O43196 834 aa19.77■□□□□ 0.76
LINC01088-206ENST00000510667 POTEDQ86YR6 584 aa19.23■□□□□ 0.67
LINC01088-206ENST00000510667 PPP4R3CPQ6ZMV5 832 aa18.67■□□□□ 0.58
LINC01088-206ENST00000510667 MAPK8IP2Q13387 824 aaPredicted RBP18.64■□□□□ 0.57
LINC01088-206ENST00000510667 SCAF1Q9H7N4 1312 aaKnown RBP18.57■□□□□ 0.56
LINC01088-206ENST00000510667 DMRT2Q9Y5R5 561 aa18.34■□□□□ 0.53
LINC01088-206ENST00000510667 CNKSR2Q8WXI2 1034 aa18.16■□□□□ 0.5
LINC01088-206ENST00000510667 NCBP3Q53F19 620 aaKnown RBP18.04■□□□□ 0.48
LINC01088-206ENST00000510667 KCNA4P22459 653 aa18.02■□□□□ 0.48
LINC01088-206ENST00000510667 HOXD11P31277 338 aaPredicted RBP17.87■□□□□ 0.45
LINC01088-206ENST00000510667 NPM3O75607 178 aaKnown RBP17.86■□□□□ 0.45
LINC01088-206ENST00000510667 RNF216Q9NWF9 866 aaPredicted RBP17.86■□□□□ 0.45
LINC01088-206ENST00000510667 DCAF8L1A6NGE4 600 aa17.59■□□□□ 0.41
LINC01088-206ENST00000510667 DNAJC5BQ9UF47 199 aa17.29■□□□□ 0.36
LINC01088-206ENST00000510667 SLC4A1APQ9BWU0 796 aaKnown RBP17.08■□□□□ 0.32
LINC01088-206ENST00000510667 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.03■□□□□ 0.32
LINC01088-206ENST00000510667 RNF39Q9H2S5 420 aa16.97■□□□□ 0.31
LINC01088-206ENST00000510667 SLC4A2P04920 1241 aa16.95■□□□□ 0.3
LINC01088-206ENST00000510667 U3KPZ7 1027 aaPredicted RBP16.78■□□□□ 0.28
LINC01088-206ENST00000510667 NISCHQ9Y2I1 1504 aa16.76■□□□□ 0.27
LINC01088-206ENST00000510667 C1QBPQ07021 282 aaKnown RBP16.7■□□□□ 0.26
LINC01088-206ENST00000510667 CACNB1Q02641 598 aaPredicted RBP16.69■□□□□ 0.26
LINC01088-206ENST00000510667 ZBTB22O15209 634 aa16.62■□□□□ 0.25
LINC01088-206ENST00000510667 FOXD4L1Q9NU39 408 aa16.6■□□□□ 0.25
LINC01088-206ENST00000510667 MYCNP04198 464 aaPredicted RBP16.47■□□□□ 0.23
LINC01088-206ENST00000510667 SPINK5Q9NQ38 1064 aaPredicted RBP16.4■□□□□ 0.22
LINC01088-206ENST00000510667 EHMT2Q96KQ7 1210 aa16.38■□□□□ 0.21
LINC01088-206ENST00000510667 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.36■□□□□ 0.21
LINC01088-206ENST00000510667 HNRNPUL2Q1KMD3 747 aaKnown RBP16.36■□□□□ 0.21
LINC01088-206ENST00000510667 SAMD1Q6SPF0 538 aaPredicted RBP16.32■□□□□ 0.2
LINC01088-206ENST00000510667 CAPN15O75808 1086 aa16.29■□□□□ 0.2
LINC01088-206ENST00000510667 CSRNP3Q8WYN3 585 aa16.28■□□□□ 0.2
LINC01088-206ENST00000510667 APLP2Q06481 763 aa16.22■□□□□ 0.19
LINC01088-206ENST00000510667 TRHP20396 242 aaPredicted RBP16.18■□□□□ 0.18
LINC01088-206ENST00000510667 ATF5Q9Y2D1 282 aaPredicted RBP16.14■□□□□ 0.17
LINC01088-206ENST00000510667 ZNF219Q9P2Y4 722 aaPredicted RBP16.1■□□□□ 0.17
LINC01088-206ENST00000510667 DSG3P32926 999 aa16.08■□□□□ 0.16
LINC01088-206ENST00000510667 ABCB7O75027 752 aa16.01■□□□□ 0.15
LINC01088-206ENST00000510667 ATXN8OSP0DMR3 200 aa15.98■□□□□ 0.15
LINC01088-206ENST00000510667 POLA2Q14181 598 aa15.85■□□□□ 0.13
LINC01088-206ENST00000510667 ZBTB12Q9Y330 459 aaPredicted RBP15.48■□□□□ 0.07
LINC01088-206ENST00000510667 MKRN4PQ13434 485 aaPredicted RBP15.41■□□□□ 0.06
LINC01088-206ENST00000510667 FBLN2P98095 1184 aa15.36■□□□□ 0.05
LINC01088-206ENST00000510667 OSCARQ8IYS5 282 aa15.35■□□□□ 0.05
LINC01088-206ENST00000510667 RBM42Q9BTD8 480 aaKnown RBP15.25■□□□□ 0.03
LINC01088-206ENST00000510667 ABCC9O60706 1549 aa15.13■□□□□ 0.01
LINC01088-206ENST00000510667 SPDYE2BA6NHP3 402 aa15.08■□□□□ 0
LINC01088-206ENST00000510667 SPDYE6P0CI01 402 aa15.08■□□□□ 0
LINC01088-206ENST00000510667 SPDYE2Q495Y8 402 aa15.08■□□□□ 0
LINC01088-206ENST00000510667 AKT1S1Q96B36 256 aa15.04■□□□□ -0
LINC01088-206ENST00000510667 ZNF692Q9BU19 519 aaPredicted RBP15.01□□□□□ -0.01
LINC01088-206ENST00000510667 SSUH2Q9Y2M2 353 aa14.98□□□□□ -0.01
LINC01088-206ENST00000510667 CCDC180Q9P1Z9 1646 aa14.95□□□□□ -0.02
LINC01088-206ENST00000510667 REM2Q8IYK8 340 aaPredicted RBP14.94□□□□□ -0.02
LINC01088-206ENST00000510667 SPDYE4A6NLX3 237 aa14.9□□□□□ -0.02
LINC01088-206ENST00000510667 POTEHQ6S545 545 aa14.89□□□□□ -0.03
LINC01088-206ENST00000510667 PABPN1Q86U42 306 aaKnown RBP eCLIP14.83□□□□□ -0.04
LINC01088-206ENST00000510667 PITPNM1O00562 1244 aa14.8□□□□□ -0.04
LINC01088-206ENST00000510667 CHRDL2Q6WN34 429 aa14.77□□□□□ -0.05
LINC01088-206ENST00000510667 FKBP8Q14318 412 aa14.73□□□□□ -0.05
LINC01088-206ENST00000510667 SPDYE1Q8NFV5 336 aaPredicted RBP14.69□□□□□ -0.06
LINC01088-206ENST00000510667 CLEC11AQ9Y240 323 aa14.68□□□□□ -0.06
LINC01088-206ENST00000510667 PROM2Q8N271 834 aa14.62□□□□□ -0.07
LINC01088-206ENST00000510667 PIP4P2Q8N4L2 257 aa14.55□□□□□ -0.08
LINC01088-206ENST00000510667 FXR2P51116 673 aaKnown RBP eCLIP14.53□□□□□ -0.08
LINC01088-206ENST00000510667 PRR29P0C7W0 189 aa14.49□□□□□ -0.09
LINC01088-206ENST00000510667 STAG3Q9UJ98 1225 aa14.45□□□□□ -0.1
LINC01088-206ENST00000510667 PRKAR2AP13861 404 aaKnown RBP14.4□□□□□ -0.1
LINC01088-206ENST00000510667 CHADLQ6NUI6 762 aa14.4□□□□□ -0.1
LINC01088-206ENST00000510667 RB1CC1Q8TDY2 1594 aa14.34□□□□□ -0.11
LINC01088-206ENST00000510667 CREBZFQ9NS37 354 aa14.3□□□□□ -0.12
LINC01088-206ENST00000510667 NACADO15069 1562 aa14.19□□□□□ -0.14
LINC01088-206ENST00000510667 FARP1Q9Y4F1 1045 aaPredicted RBP14.19□□□□□ -0.14
LINC01088-206ENST00000510667 FBXO3Q9UK99 471 aa14.17□□□□□ -0.14
LINC01088-206ENST00000510667 MIER1Q8N108 512 aa14.14□□□□□ -0.15
LINC01088-206ENST00000510667 MNX1P50219 401 aaPredicted RBP14.13□□□□□ -0.15
LINC01088-206ENST00000510667 HAX1O00165 279 aa14.12□□□□□ -0.15
LINC01088-206ENST00000510667 PLCD3Q8N3E9 789 aa14.1□□□□□ -0.15
LINC01088-206ENST00000510667 EVX2Q03828 476 aa14.07□□□□□ -0.16
LINC01088-206ENST00000510667 VASPP50552 380 aaPredicted RBP14.06□□□□□ -0.16
LINC01088-206ENST00000510667 UNC13AQ9UPW8 1703 aa14.05□□□□□ -0.16
LINC01088-206ENST00000510667 C19orf67A6NJJ6 358 aa14.05□□□□□ -0.16
LINC01088-206ENST00000510667 MYO15BQ96JP2 1530 aa14.03□□□□□ -0.16
LINC01088-206ENST00000510667 PLEKHG5O94827 1062 aa14□□□□□ -0.17
LINC01088-206ENST00000510667 ZCCHC6Q5VYS8 1495 aaKnown RBP13.99□□□□□ -0.17
LINC01088-206ENST00000510667 BICRAQ9NZM4 1560 aa13.98□□□□□ -0.17
LINC01088-206ENST00000510667 NPM1P06748 294 aaKnown RBP eCLIP13.97□□□□□ -0.17
LINC01088-206ENST00000510667 CD44P16070 742 aaKnown RBP13.97□□□□□ -0.17
LINC01088-206ENST00000510667 DCAF8L2P0C7V8 631 aa13.93□□□□□ -0.18
LINC01088-206ENST00000510667 DCAF1Q9Y4B6 1507 aa13.93□□□□□ -0.18
LINC01088-206ENST00000510667 SP7Q8TDD2 431 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms