RNA–Protein interactions for RNA: ENST00000519760.1

CDK1-208, Transcript of cyclin dependent kinase 1, human

TSL 3

Gene CDK1, Length 276 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK1-208	ENST00000519760	AEBP2	Q6ZN18	517 aa	Predicted RBP	19.58	■□□□□ 0.72
CDK1-208	ENST00000519760	CHIC1	Q5VXU3	224 aa		18.79	■□□□□ 0.6
CDK1-208	ENST00000519760	PHF23	Q9BUL5	403 aa	Predicted RBP	16.59	■□□□□ 0.25
CDK1-208	ENST00000519760	SENP3	Q9H4L4	574 aa	Predicted RBP	16.53	■□□□□ 0.24
CDK1-208	ENST00000519760	FOXD1	Q16676	465 aa		15.46	■□□□□ 0.07
CDK1-208	ENST00000519760	PLPPR3	Q6T4P5	718 aa		15.1	■□□□□ 0.01
CDK1-208	ENST00000519760	PPP6R1	Q9UPN7	881 aa		14.74	□□□□□ -0.05
CDK1-208	ENST00000519760	ADRA2B	P18089	450 aa		14.69	□□□□□ -0.06
CDK1-208	ENST00000519760	PIAS4	Q8N2W9	510 aa	Predicted RBP	14.49	□□□□□ -0.09
CDK1-208	ENST00000519760	MSH5	O43196	834 aa		14.25	□□□□□ -0.13
CDK1-208	ENST00000519760	POTED	Q86YR6	584 aa		13.53	□□□□□ -0.24
CDK1-208	ENST00000519760	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.44	□□□□□ -0.26
CDK1-208	ENST00000519760	PPP4R3CP	Q6ZMV5	832 aa		13.33	□□□□□ -0.28
CDK1-208	ENST00000519760	SCAF1	Q9H7N4	1312 aa	Known RBP	13.28	□□□□□ -0.28
CDK1-208	ENST00000519760	DMRT2	Q9Y5R5	561 aa		13.18	□□□□□ -0.3
CDK1-208	ENST00000519760	CNKSR2	Q8WXI2	1034 aa		12.97	□□□□□ -0.33
CDK1-208	ENST00000519760	NCBP3	Q53F19	620 aa	Known RBP	12.82	□□□□□ -0.36
CDK1-208	ENST00000519760	HOXD11	P31277	338 aa	Predicted RBP	12.8	□□□□□ -0.36
CDK1-208	ENST00000519760	KCNA4	P22459	653 aa		12.77	□□□□□ -0.37
CDK1-208	ENST00000519760	RNF216	Q9NWF9	866 aa	Predicted RBP	12.77	□□□□□ -0.37
CDK1-208	ENST00000519760	NPM3	O75607	178 aa	Known RBP	12.73	□□□□□ -0.37
CDK1-208	ENST00000519760	DCAF8L1	A6NGE4	600 aa		12.67	□□□□□ -0.38
CDK1-208	ENST00000519760	DNAJC5B	Q9UF47	199 aa		12.28	□□□□□ -0.44
CDK1-208	ENST00000519760	RNF39	Q9H2S5	420 aa		12.24	□□□□□ -0.45
CDK1-208	ENST00000519760	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	12.21	□□□□□ -0.45
CDK1-208	ENST00000519760	SLC4A2	P04920	1241 aa		12.11	□□□□□ -0.47
CDK1-208	ENST00000519760	CACNB1	Q02641	598 aa	Predicted RBP	12.11	□□□□□ -0.47
CDK1-208	ENST00000519760	SLC4A1AP	Q9BWU0	796 aa	Known RBP	12.06	□□□□□ -0.48
CDK1-208	ENST00000519760	C1QBP	Q07021	282 aa	Known RBP	12.03	□□□□□ -0.48
CDK1-208	ENST00000519760		U3KPZ7	1027 aa	Predicted RBP	12.02	□□□□□ -0.49
CDK1-208	ENST00000519760	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.8	□□□□□ -0.52
CDK1-208	ENST00000519760	ZBTB22	O15209	634 aa		11.78	□□□□□ -0.52
CDK1-208	ENST00000519760	FOXD4L1	Q9NU39	408 aa		11.75	□□□□□ -0.53
CDK1-208	ENST00000519760	CAPN15	O75808	1086 aa		11.71	□□□□□ -0.53
CDK1-208	ENST00000519760	MYCN	P04198	464 aa	Predicted RBP	11.7	□□□□□ -0.54
CDK1-208	ENST00000519760	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	11.64	□□□□□ -0.55
CDK1-208	ENST00000519760	HNRNPUL2	Q1KMD3	747 aa	Known RBP	11.64	□□□□□ -0.55
CDK1-208	ENST00000519760	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.62	□□□□□ -0.55
CDK1-208	ENST00000519760	TRH	P20396	242 aa	Predicted RBP	11.61	□□□□□ -0.55
CDK1-208	ENST00000519760	DSG3	P32926	999 aa		11.59	□□□□□ -0.55
CDK1-208	ENST00000519760	APLP2	Q06481	763 aa		11.55	□□□□□ -0.56
CDK1-208	ENST00000519760	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.54	□□□□□ -0.56
CDK1-208	ENST00000519760	ABCB7	O75027	752 aa		11.51	□□□□□ -0.57
CDK1-208	ENST00000519760	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.5	□□□□□ -0.57
CDK1-208	ENST00000519760	EHMT2	Q96KQ7	1210 aa		11.48	□□□□□ -0.57
CDK1-208	ENST00000519760	CSRNP3	Q8WYN3	585 aa		11.47	□□□□□ -0.57
CDK1-208	ENST00000519760	POLA2	Q14181	598 aa		11.36	□□□□□ -0.59
CDK1-208	ENST00000519760	ATXN8OS	P0DMR3	200 aa		11.31	□□□□□ -0.6
CDK1-208	ENST00000519760	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.02	□□□□□ -0.65
CDK1-208	ENST00000519760	MKRN4P	Q13434	485 aa	Predicted RBP	11	□□□□□ -0.65
CDK1-208	ENST00000519760	OSCAR	Q8IYS5	282 aa		10.99	□□□□□ -0.65
CDK1-208	ENST00000519760	RBM42	Q9BTD8	480 aa	Known RBP	10.94	□□□□□ -0.66
CDK1-208	ENST00000519760	FBLN2	P98095	1184 aa		10.92	□□□□□ -0.66
CDK1-208	ENST00000519760	AKT1S1	Q96B36	256 aa		10.79	□□□□□ -0.68
CDK1-208	ENST00000519760	SPDYE2B	A6NHP3	402 aa		10.76	□□□□□ -0.69
CDK1-208	ENST00000519760	SPDYE6	P0CI01	402 aa		10.76	□□□□□ -0.69
CDK1-208	ENST00000519760	SPDYE2	Q495Y8	402 aa		10.76	□□□□□ -0.69
CDK1-208	ENST00000519760	REM2	Q8IYK8	340 aa	Predicted RBP	10.74	□□□□□ -0.69
CDK1-208	ENST00000519760	ZNF692	Q9BU19	519 aa	Predicted RBP	10.73	□□□□□ -0.69
CDK1-208	ENST00000519760	SSUH2	Q9Y2M2	353 aa		10.68	□□□□□ -0.7
CDK1-208	ENST00000519760	CHRDL2	Q6WN34	429 aa		10.66	□□□□□ -0.7
CDK1-208	ENST00000519760	PITPNM1	O00562	1244 aa		10.64	□□□□□ -0.71
CDK1-208	ENST00000519760	POTEH	Q6S545	545 aa		10.63	□□□□□ -0.71
CDK1-208	ENST00000519760	PABPN1	Q86U42	306 aa	Known RBP eCLIP	10.59	□□□□□ -0.71
CDK1-208	ENST00000519760	SPDYE4	A6NLX3	237 aa		10.56	□□□□□ -0.72
CDK1-208	ENST00000519760	CLEC11A	Q9Y240	323 aa		10.54	□□□□□ -0.72
CDK1-208	ENST00000519760	PIP4P2	Q8N4L2	257 aa		10.5	□□□□□ -0.73
CDK1-208	ENST00000519760	SPDYE1	Q8NFV5	336 aa	Predicted RBP	10.5	□□□□□ -0.73
CDK1-208	ENST00000519760	FXR2	P51116	673 aa	Known RBP eCLIP	10.46	□□□□□ -0.73
CDK1-208	ENST00000519760	PRR29	P0C7W0	189 aa		10.38	□□□□□ -0.75
CDK1-208	ENST00000519760	PRKAR2A	P13861	404 aa	Known RBP	10.36	□□□□□ -0.75
CDK1-208	ENST00000519760	FKBP8	Q14318	412 aa		10.36	□□□□□ -0.75
CDK1-208	ENST00000519760	CHADL	Q6NUI6	762 aa		10.36	□□□□□ -0.75
CDK1-208	ENST00000519760	PROM2	Q8N271	834 aa		10.34	□□□□□ -0.75
CDK1-208	ENST00000519760	STAG3	Q9UJ98	1225 aa		10.27	□□□□□ -0.77
CDK1-208	ENST00000519760	CREBZF	Q9NS37	354 aa		10.23	□□□□□ -0.77
CDK1-208	ENST00000519760	HAX1	O00165	279 aa		10.22	□□□□□ -0.77
CDK1-208	ENST00000519760	EVX2	Q03828	476 aa		10.21	□□□□□ -0.77
CDK1-208	ENST00000519760	FARP1	Q9Y4F1	1045 aa	Predicted RBP	10.17	□□□□□ -0.78
CDK1-208	ENST00000519760	C19orf67	A6NJJ6	358 aa		10.12	□□□□□ -0.79
CDK1-208	ENST00000519760	MNX1	P50219	401 aa	Predicted RBP	10.09	□□□□□ -0.79
CDK1-208	ENST00000519760	SP7	Q8TDD2	431 aa	Predicted RBP	10.09	□□□□□ -0.79
CDK1-208	ENST00000519760	MIER1	Q8N108	512 aa		10.05	□□□□□ -0.8
CDK1-208	ENST00000519760	CD44	P16070	742 aa	Known RBP	10.03	□□□□□ -0.8
CDK1-208	ENST00000519760	PLCD3	Q8N3E9	789 aa		9.99	□□□□□ -0.81
CDK1-208	ENST00000519760	NPM1	P06748	294 aa	Known RBP eCLIP	9.96	□□□□□ -0.82
CDK1-208	ENST00000519760	ZRANB1	Q9UGI0	708 aa		9.95	□□□□□ -0.82
CDK1-208	ENST00000519760	FBXO3	Q9UK99	471 aa		9.95	□□□□□ -0.82
CDK1-208	ENST00000519760	GABBR2	O75899	941 aa		9.92	□□□□□ -0.82
CDK1-208	ENST00000519760	PLEKHG5	O94827	1062 aa		9.91	□□□□□ -0.82
CDK1-208	ENST00000519760	VASP	P50552	380 aa	Predicted RBP	9.9	□□□□□ -0.82
CDK1-208	ENST00000519760	TSPYL2	Q9H2G4	693 aa	Predicted RBP	9.88	□□□□□ -0.83
CDK1-208	ENST00000519760	RASEF	Q8IZ41	740 aa		9.87	□□□□□ -0.83
CDK1-208	ENST00000519760	PHF12	Q96QT6	1004 aa		9.87	□□□□□ -0.83
CDK1-208	ENST00000519760	ZNF579	Q8NAF0	562 aa	Known RBP	9.86	□□□□□ -0.83
CDK1-208	ENST00000519760	PAK3	O75914	559 aa	Predicted RBP	9.84	□□□□□ -0.83
CDK1-208	ENST00000519760	NUBP1	P53384	320 aa		9.84	□□□□□ -0.83
CDK1-208	ENST00000519760	ZBTB47	Q9UFB7	747 aa	Predicted RBP	9.8	□□□□□ -0.84
CDK1-208	ENST00000519760	CCDC61	Q9Y6R9	512 aa		9.8	□□□□□ -0.84
CDK1-208	ENST00000519760	GALR2	O43603	387 aa	Predicted RBP	9.79	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms