RNA–Protein interactions for RNA: ENST00000482028.5

PABPC4-213, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-213ENST00000482028 NISCHQ9Y2I1 1504 aa28.66■■■□□ 2.18
PABPC4-213ENST00000482028 CCDC180Q9P1Z9 1646 aa25.09■■□□□ 1.61
PABPC4-213ENST00000482028 ZCCHC6Q5VYS8 1495 aaKnown RBP24.15■■□□□ 1.46
PABPC4-213ENST00000482028 DCAF1Q9Y4B6 1507 aa23.95■■□□□ 1.43
PABPC4-213ENST00000482028 ABCC9O60706 1549 aa23.69■■□□□ 1.38
PABPC4-213ENST00000482028 MYO15BQ96JP2 1530 aa23.64■■□□□ 1.37
PABPC4-213ENST00000482028 DNAJC5BQ9UF47 199 aa23.3■■□□□ 1.32
PABPC4-213ENST00000482028 NACADO15069 1562 aa23.27■■□□□ 1.32
PABPC4-213ENST00000482028 DCAF8L2P0C7V8 631 aa23.21■■□□□ 1.31
PABPC4-213ENST00000482028 SHROOM4Q9ULL8 1493 aa23.11■■□□□ 1.29
PABPC4-213ENST00000482028 RB1CC1Q8TDY2 1594 aa22.95■■□□□ 1.26
PABPC4-213ENST00000482028 SCRIBQ14160 1630 aa22.73■■□□□ 1.23
PABPC4-213ENST00000482028 SUPT5HO00267 1087 aaKnown RBP22.48■■□□□ 1.19
PABPC4-213ENST00000482028 UNC13AQ9UPW8 1703 aa22.31■■□□□ 1.16
PABPC4-213ENST00000482028 DNAJC5Q9H3Z4 198 aa22.25■■□□□ 1.15
PABPC4-213ENST00000482028 RSF1Q96T23 1441 aaPredicted RBP22.24■■□□□ 1.15
PABPC4-213ENST00000482028 BAZ1AQ9NRL2 1556 aaPredicted RBP22.21■■□□□ 1.15
PABPC4-213ENST00000482028 AEBP2Q6ZN18 517 aaPredicted RBP22.16■■□□□ 1.14
PABPC4-213ENST00000482028 BICRAQ9NZM4 1560 aa22.04■■□□□ 1.12
PABPC4-213ENST00000482028 CECR2Q9BXF3 1484 aa21.99■■□□□ 1.11
PABPC4-213ENST00000482028 MROH2BQ7Z745 1585 aa21.99■■□□□ 1.11
PABPC4-213ENST00000482028 SMARCA4P51532 1647 aa21.98■■□□□ 1.11
PABPC4-213ENST00000482028 PEG3Q9GZU2 1588 aa21.85■■□□□ 1.09
PABPC4-213ENST00000482028 WIZO95785 1651 aa21.83■■□□□ 1.09
PABPC4-213ENST00000482028 PABPN1Q86U42 306 aaKnown RBP eCLIP21.81■■□□□ 1.08
PABPC4-213ENST00000482028 TOP2AP11388 1531 aaKnown RBP21.8■■□□□ 1.08
PABPC4-213ENST00000482028 CHIC1Q5VXU3 224 aa21.79■■□□□ 1.08
PABPC4-213ENST00000482028 SMARCA2P51531 1590 aa21.68■■□□□ 1.06
PABPC4-213ENST00000482028 ATAD2BQ9ULI0 1458 aa21.5■■□□□ 1.03
PABPC4-213ENST00000482028 EIF4G1Q04637 1599 aaKnown RBP21.45■■□□□ 1.02
PABPC4-213ENST00000482028 HMGXB3Q12766 1538 aa21.45■■□□□ 1.02
PABPC4-213ENST00000482028 CCDC88BA6NC98 1476 aa21.44■■□□□ 1.02
PABPC4-213ENST00000482028 BAZ1BQ9UIG0 1483 aaKnown RBP21.44■■□□□ 1.02
PABPC4-213ENST00000482028 CC2D2AQ9P2K1 1620 aa21.39■■□□□ 1.01
PABPC4-213ENST00000482028 NCAPD3P42695 1498 aa21.38■■□□□ 1.01
PABPC4-213ENST00000482028 TRIM41Q8WV44 630 aa21.33■■□□□ 1.01
PABPC4-213ENST00000482028 EEA1Q15075 1411 aa21.11■□□□□ 0.97
PABPC4-213ENST00000482028 PRDM2Q13029 1718 aa21.02■□□□□ 0.96
PABPC4-213ENST00000482028 WRNQ14191 1432 aaPredicted RBP eCLIP21■□□□□ 0.95
PABPC4-213ENST00000482028 CUX2O14529 1486 aa20.96■□□□□ 0.95
PABPC4-213ENST00000482028 ABCC8Q09428 1581 aa20.95■□□□□ 0.94
PABPC4-213ENST00000482028 CFTRP13569 1480 aa20.94■□□□□ 0.94
PABPC4-213ENST00000482028 BIVM-ERCC5R4GMW8 1640 aa20.87■□□□□ 0.93
PABPC4-213ENST00000482028 TOP2BQ02880 1626 aa20.86■□□□□ 0.93
PABPC4-213ENST00000482028 SYNJ1O43426 1573 aa20.79■□□□□ 0.92
PABPC4-213ENST00000482028 CADPSQ9ULU8 1353 aa20.78■□□□□ 0.92
PABPC4-213ENST00000482028 LOC105371045A0A1W2PR82 267 aa20.75■□□□□ 0.91
PABPC4-213ENST00000482028 KIF21BO75037 1637 aa20.68■□□□□ 0.9
PABPC4-213ENST00000482028 LAMC3Q9Y6N6 1575 aa20.68■□□□□ 0.9
PABPC4-213ENST00000482028 CSRNP3Q8WYN3 585 aa20.67■□□□□ 0.9
PABPC4-213ENST00000482028 CEP164Q9UPV0 1460 aa20.65■□□□□ 0.9
PABPC4-213ENST00000482028 GOLGA3Q08378 1498 aa20.63■□□□□ 0.89
PABPC4-213ENST00000482028 FAM9AQ8IZU1 332 aaPredicted RBP20.63■□□□□ 0.89
PABPC4-213ENST00000482028 SOGA1O94964 1423 aa20.61■□□□□ 0.89
PABPC4-213ENST00000482028 TNIKQ9UKE5 1360 aa20.61■□□□□ 0.89
PABPC4-213ENST00000482028 CUX1P39880 1505 aa20.58■□□□□ 0.89
PABPC4-213ENST00000482028 ERICH3Q5RHP9 1530 aa20.54■□□□□ 0.88
PABPC4-213ENST00000482028 KIF27Q86VH2 1401 aa20.53■□□□□ 0.88
PABPC4-213ENST00000482028 ERCC6Q03468 1493 aa20.51■□□□□ 0.87
PABPC4-213ENST00000482028 FANCD2Q9BXW9 1451 aa20.51■□□□□ 0.87
PABPC4-213ENST00000482028 DNMBPQ6XZF7 1577 aa20.48■□□□□ 0.87
PABPC4-213ENST00000482028 PDS5BQ9NTI5 1447 aa20.47■□□□□ 0.87
PABPC4-213ENST00000482028 RUSC2Q8N2Y8 1516 aa20.43■□□□□ 0.86
PABPC4-213ENST00000482028 CEP162Q5TB80 1403 aa20.42■□□□□ 0.86
PABPC4-213ENST00000482028 TRIM26Q12899 539 aaPredicted RBP20.41■□□□□ 0.86
PABPC4-213ENST00000482028 PRXQ9BXM0 1461 aa20.4■□□□□ 0.86
PABPC4-213ENST00000482028 UBTFP17480 764 aaKnown RBP20.34■□□□□ 0.85
PABPC4-213ENST00000482028 FGD5Q6ZNL6 1462 aa20.34■□□□□ 0.85
PABPC4-213ENST00000482028 TOPBP1Q92547 1522 aa20.32■□□□□ 0.84
PABPC4-213ENST00000482028 ABCA10Q8WWZ4 1543 aa20.3■□□□□ 0.84
PABPC4-213ENST00000482028 RAPGEF2Q9Y4G8 1499 aa20.25■□□□□ 0.83
PABPC4-213ENST00000482028 NESP48681 1621 aa20.24■□□□□ 0.83
PABPC4-213ENST00000482028 CUL7Q14999 1698 aa20.23■□□□□ 0.83
PABPC4-213ENST00000482028 CLIP1P30622 1438 aa20.23■□□□□ 0.83
PABPC4-213ENST00000482028 POLA1P09884 1462 aaPredicted RBP20.22■□□□□ 0.83
PABPC4-213ENST00000482028 PCGF6Q9BYE7 350 aa20.21■□□□□ 0.83
PABPC4-213ENST00000482028 WDR97A6NE52 1622 aa20.2■□□□□ 0.82
PABPC4-213ENST00000482028 KIF21AQ7Z4S6 1674 aa20.18■□□□□ 0.82
PABPC4-213ENST00000482028 IGF1RP08069 1367 aa20.17■□□□□ 0.82
PABPC4-213ENST00000482028 URB2Q14146 1524 aaKnown RBP20.17■□□□□ 0.82
PABPC4-213ENST00000482028 VPS8Q8N3P4 1428 aa20.15■□□□□ 0.82
PABPC4-213ENST00000482028 THOC2Q8NI27 1593 aaKnown RBP20.15■□□□□ 0.82
PABPC4-213ENST00000482028 EHMT2Q96KQ7 1210 aa20.12■□□□□ 0.81
PABPC4-213ENST00000482028 MRC2Q9UBG0 1479 aa20.11■□□□□ 0.81
PABPC4-213ENST00000482028 CARMIL1Q5VZK9 1371 aa20.11■□□□□ 0.81
PABPC4-213ENST00000482028 ABCA5Q8WWZ7 1642 aa20.09■□□□□ 0.81
PABPC4-213ENST00000482028 WDR62O43379 1518 aa20.02■□□□□ 0.8
PABPC4-213ENST00000482028 TARBP1Q13395 1621 aaKnown RBP20.02■□□□□ 0.79
PABPC4-213ENST00000482028 HRCP23327 699 aa20.01■□□□□ 0.79
PABPC4-213ENST00000482028 APLP2Q06481 763 aa20.01■□□□□ 0.79
PABPC4-213ENST00000482028 RAD54L2Q9Y4B4 1467 aa20■□□□□ 0.79
PABPC4-213ENST00000482028 EFCAB5A4FU69 1503 aa20■□□□□ 0.79
PABPC4-213ENST00000482028 GAPVD1Q14C86 1478 aa19.99■□□□□ 0.79
PABPC4-213ENST00000482028 ZEB1P37275 1124 aaPredicted RBP19.98■□□□□ 0.79
PABPC4-213ENST00000482028 CTTNBP2Q8WZ74 1663 aa19.97■□□□□ 0.79
PABPC4-213ENST00000482028 IFT140Q96RY7 1462 aa19.97■□□□□ 0.79
PABPC4-213ENST00000482028 MAP3K1Q13233 1512 aa19.95■□□□□ 0.78
PABPC4-213ENST00000482028 FHAD1B1AJZ9 1412 aa19.93■□□□□ 0.78
PABPC4-213ENST00000482028 ARAP1Q96P48 1450 aa19.92■□□□□ 0.78
PABPC4-213ENST00000482028 PBRM1Q86U86 1689 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms