RNA–Protein interactions for RNA: ENST00000640168.1

REST-211, Transcript of RE1 silencing transcription factor, humanhuman

TSL 1 (best) BASIC

Gene REST, Length 1,268 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REST-211ENST00000640168 NISCHQ9Y2I1 1504 aa48.54■■■■■ 5.36
REST-211ENST00000640168 ABCC9O60706 1549 aa44.18■■■■■ 4.66
REST-211ENST00000640168 CCDC180Q9P1Z9 1646 aa43.73■■■■■ 4.59
REST-211ENST00000640168 RB1CC1Q8TDY2 1594 aa41.86■■■■■ 4.29
REST-211ENST00000640168 DNAJC5BQ9UF47 199 aa41.69■■■■■ 4.26
REST-211ENST00000640168 NACADO15069 1562 aa41.44■■■■■ 4.22
REST-211ENST00000640168 DCAF8L2P0C7V8 631 aa41.41■■■■■ 4.22
REST-211ENST00000640168 PABPN1Q86U42 306 aaKnown RBP eCLIP41.11■■■■■ 4.17
REST-211ENST00000640168 UNC13AQ9UPW8 1703 aa40.9■■■■■ 4.14
REST-211ENST00000640168 MYO15BQ96JP2 1530 aa40.65■■■■■ 4.1
REST-211ENST00000640168 BICRAQ9NZM4 1560 aa40.56■■■■■ 4.08
REST-211ENST00000640168 ZCCHC6Q5VYS8 1495 aaKnown RBP40.12■■■■■ 4.01
REST-211ENST00000640168 DCAF1Q9Y4B6 1507 aa40.01■■■■■ 4
REST-211ENST00000640168 SHROOM4Q9ULL8 1493 aa39.96■■■■□ 3.99
REST-211ENST00000640168 SCRIBQ14160 1630 aa39.91■■■■□ 3.98
REST-211ENST00000640168 CC2D2AQ9P2K1 1620 aa39.85■■■■□ 3.97
REST-211ENST00000640168 CECR2Q9BXF3 1484 aa39.81■■■■□ 3.96
REST-211ENST00000640168 EIF4G1Q04637 1599 aaKnown RBP39.65■■■■□ 3.94
REST-211ENST00000640168 DNAJC5Q9H3Z4 198 aa38.6■■■■□ 3.77
REST-211ENST00000640168 ERCC6Q03468 1493 aa38.23■■■■□ 3.71
REST-211ENST00000640168 NCAPD3P42695 1498 aa38.22■■■■□ 3.71
REST-211ENST00000640168 CUX2O14529 1486 aa38.17■■■■□ 3.7
REST-211ENST00000640168 ATAD2BQ9ULI0 1458 aa38.08■■■■□ 3.69
REST-211ENST00000640168 SMARCA2P51531 1590 aa37.99■■■■□ 3.67
REST-211ENST00000640168 SMARCA4P51532 1647 aa37.97■■■■□ 3.67
REST-211ENST00000640168 HMGXB3Q12766 1538 aa37.92■■■■□ 3.66
REST-211ENST00000640168 NESP48681 1621 aa37.81■■■■□ 3.64
REST-211ENST00000640168 BAZ1BQ9UIG0 1483 aaKnown RBP37.76■■■■□ 3.63
REST-211ENST00000640168 BAZ1AQ9NRL2 1556 aaPredicted RBP37.74■■■■□ 3.63
REST-211ENST00000640168 PEG3Q9GZU2 1588 aa37.52■■■■□ 3.6
REST-211ENST00000640168 LAMC3Q9Y6N6 1575 aa37.48■■■■□ 3.59
REST-211ENST00000640168 THOC2Q8NI27 1593 aaKnown RBP37.45■■■■□ 3.59
REST-211ENST00000640168 MROH2BQ7Z745 1585 aa37.41■■■■□ 3.58
REST-211ENST00000640168 KIF21AQ7Z4S6 1674 aa37.34■■■■□ 3.57
REST-211ENST00000640168 PDS5BQ9NTI5 1447 aa37.32■■■■□ 3.56
REST-211ENST00000640168 CADPSQ9ULU8 1353 aa37.1■■■■□ 3.53
REST-211ENST00000640168 WIZO95785 1651 aa36.99■■■■□ 3.51
REST-211ENST00000640168 MRC2Q9UBG0 1479 aa36.98■■■■□ 3.51
REST-211ENST00000640168 TRIM41Q8WV44 630 aa36.91■■■■□ 3.5
REST-211ENST00000640168 WDR62O43379 1518 aa36.85■■■■□ 3.49
REST-211ENST00000640168 CEP164Q9UPV0 1460 aa36.79■■■■□ 3.48
REST-211ENST00000640168 FANCD2Q9BXW9 1451 aa36.69■■■■□ 3.46
REST-211ENST00000640168 RSF1Q96T23 1441 aaPredicted RBP36.6■■■■□ 3.45
REST-211ENST00000640168 CFTRP13569 1480 aa36.56■■■■□ 3.44
REST-211ENST00000640168 OSCARQ8IYS5 282 aa36.47■■■■□ 3.43
REST-211ENST00000640168 TOP2AP11388 1531 aaKnown RBP36.46■■■■□ 3.43
REST-211ENST00000640168 URB2Q14146 1524 aaKnown RBP36.38■■■■□ 3.41
REST-211ENST00000640168 PRDM2Q13029 1718 aa36.23■■■■□ 3.39
REST-211ENST00000640168 CCDC88BA6NC98 1476 aa36.06■■■■□ 3.36
REST-211ENST00000640168 IFT140Q96RY7 1462 aa36.05■■■■□ 3.36
REST-211ENST00000640168 ZNF608Q9ULD9 1512 aaPredicted RBP36.01■■■■□ 3.36
REST-211ENST00000640168 RIMBP3CA6NJZ7 1639 aa35.97■■■■□ 3.35
REST-211ENST00000640168 RIMBP3BA6NNM3 1639 aa35.97■■■■□ 3.35
REST-211ENST00000640168 RIMBP3Q9UFD9 1639 aa35.97■■■■□ 3.35
REST-211ENST00000640168 TOPBP1Q92547 1522 aa35.94■■■■□ 3.34
REST-211ENST00000640168 ABCC8Q09428 1581 aa35.87■■■■□ 3.33
REST-211ENST00000640168 EIF4G3O43432 1585 aaKnown RBP35.81■■■■□ 3.32
REST-211ENST00000640168 ARHGEF11O15085 1522 aa35.8■■■■□ 3.32
REST-211ENST00000640168 DNMBPQ6XZF7 1577 aa35.78■■■■□ 3.32
REST-211ENST00000640168 AQRO60306 1485 aaKnown RBP eCLIP35.67■■■■□ 3.3
REST-211ENST00000640168 FBLN2P98095 1184 aa35.67■■■■□ 3.3
REST-211ENST00000640168 CYB5RLQ6IPT4 315 aa35.67■■■■□ 3.3
REST-211ENST00000640168 CHD1O14646 1710 aa35.66■■■■□ 3.3
REST-211ENST00000640168 TARBP1Q13395 1621 aaKnown RBP35.61■■■■□ 3.29
REST-211ENST00000640168 POLA1P09884 1462 aaPredicted RBP35.54■■■■□ 3.28
REST-211ENST00000640168 TRHP20396 242 aaPredicted RBP35.49■■■■□ 3.27
REST-211ENST00000640168 RAD54L2Q9Y4B4 1467 aa35.46■■■■□ 3.27
REST-211ENST00000640168 SOGA1O94964 1423 aa35.43■■■■□ 3.26
REST-211ENST00000640168 SUPT5HO00267 1087 aaKnown RBP35.42■■■■□ 3.26
REST-211ENST00000640168 TDRD9Q8NDG6 1382 aaKnown RBP35.41■■■■□ 3.26
REST-211ENST00000640168 ARAP1Q96P48 1450 aa35.41■■■■□ 3.26
REST-211ENST00000640168 SNAPC4Q5SXM2 1469 aa35.29■■■■□ 3.24
REST-211ENST00000640168 FGD5Q6ZNL6 1462 aa35.29■■■■□ 3.24
REST-211ENST00000640168 CHMP7Q8WUX9 453 aaPredicted RBP35.29■■■■□ 3.24
REST-211ENST00000640168 WDR97A6NE52 1622 aa35.24■■■■□ 3.23
REST-211ENST00000640168 SYNJ1O43426 1573 aa35.19■■■■□ 3.22
REST-211ENST00000640168 CUX1P39880 1505 aa35.16■■■■□ 3.22
REST-211ENST00000640168 MAGI1Q96QZ7 1491 aaPredicted RBP35.16■■■■□ 3.22
REST-211ENST00000640168 GRIN2BQ13224 1484 aa35.15■■■■□ 3.22
REST-211ENST00000640168 CLASP1Q7Z460 1538 aa35.14■■■■□ 3.22
REST-211ENST00000640168 SYNJ2O15056 1496 aa35.06■■■■□ 3.2
REST-211ENST00000640168 PBRM1Q86U86 1689 aa35.01■■■■□ 3.19
REST-211ENST00000640168 GAPVD1Q14C86 1478 aa34.98■■■■□ 3.19
REST-211ENST00000640168 ABCA10Q8WWZ4 1543 aa34.83■■■■□ 3.17
REST-211ENST00000640168 ABCA5Q8WWZ7 1642 aa34.81■■■■□ 3.16
REST-211ENST00000640168 AEBP2Q6ZN18 517 aaPredicted RBP34.76■■■■□ 3.16
REST-211ENST00000640168 WRNQ14191 1432 aaPredicted RBP eCLIP34.68■■■■□ 3.14
REST-211ENST00000640168 GRIN2AQ12879 1464 aa34.67■■■■□ 3.14
REST-211ENST00000640168 ERCC6L2Q5T890 1561 aa34.6■■■■□ 3.13
REST-211ENST00000640168 ADAMTS12P58397 1594 aa34.59■■■■□ 3.13
REST-211ENST00000640168 CEP170Q5SW79 1584 aa34.56■■■■□ 3.12
REST-211ENST00000640168 BIVM-ERCC5R4GMW8 1640 aa34.52■■■■□ 3.12
REST-211ENST00000640168 NUP160Q12769 1436 aa34.52■■■■□ 3.12
REST-211ENST00000640168 TOP2BQ02880 1626 aa34.52■■■■□ 3.12
REST-211ENST00000640168 FHAD1B1AJZ9 1412 aa34.51■■■■□ 3.12
REST-211ENST00000640168 SHROOM2Q13796 1616 aa34.41■■■■□ 3.1
REST-211ENST00000640168 ERICH3Q5RHP9 1530 aa34.4■■■■□ 3.1
REST-211ENST00000640168 PRG4Q92954 1404 aaPredicted RBP34.31■■■■□ 3.08
REST-211ENST00000640168 JPH4Q96JJ6 628 aa34.28■■■■□ 3.08
REST-211ENST00000640168 KIF13AQ9H1H9 1805 aa34.22■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms