RNA–Protein interactions for RNA: ENST00000567521.1

NAE1-217, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 3

Gene NAE1, Length 765 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-217ENST00000567521 AEBP2Q6ZN18 517 aaPredicted RBP28.23■■■□□ 2.11
NAE1-217ENST00000567521 CHIC1Q5VXU3 224 aa27.66■■■□□ 2.02
NAE1-217ENST00000567521 PHF23Q9BUL5 403 aaPredicted RBP24.33■■□□□ 1.49
NAE1-217ENST00000567521 SENP3Q9H4L4 574 aaPredicted RBP23.97■■□□□ 1.43
NAE1-217ENST00000567521 PLPPR3Q6T4P5 718 aa22.52■■□□□ 1.2
NAE1-217ENST00000567521 FOXD1Q16676 465 aa22.22■■□□□ 1.15
NAE1-217ENST00000567521 ADRA2BP18089 450 aa21.44■■□□□ 1.02
NAE1-217ENST00000567521 PPP6R1Q9UPN7 881 aa21.44■■□□□ 1.02
NAE1-217ENST00000567521 PIAS4Q8N2W9 510 aaPredicted RBP21■□□□□ 0.95
NAE1-217ENST00000567521 MSH5O43196 834 aa20.48■□□□□ 0.87
NAE1-217ENST00000567521 POTEDQ86YR6 584 aa20.14■□□□□ 0.81
NAE1-217ENST00000567521 PPP4R3CPQ6ZMV5 832 aa19.85■□□□□ 0.77
NAE1-217ENST00000567521 SCAF1Q9H7N4 1312 aaKnown RBP19.65■□□□□ 0.74
NAE1-217ENST00000567521 KCNA4P22459 653 aa19.47■□□□□ 0.71
NAE1-217ENST00000567521 MAPK8IP2Q13387 824 aaPredicted RBP19.43■□□□□ 0.7
NAE1-217ENST00000567521 NCBP3Q53F19 620 aaKnown RBP19.37■□□□□ 0.69
NAE1-217ENST00000567521 CNKSR2Q8WXI2 1034 aa19.28■□□□□ 0.68
NAE1-217ENST00000567521 DMRT2Q9Y5R5 561 aa19.13■□□□□ 0.65
NAE1-217ENST00000567521 NPM3O75607 178 aaKnown RBP19.06■□□□□ 0.64
NAE1-217ENST00000567521 RNF216Q9NWF9 866 aaPredicted RBP18.87■□□□□ 0.61
NAE1-217ENST00000567521 HOXD11P31277 338 aaPredicted RBP18.76■□□□□ 0.59
NAE1-217ENST00000567521 SLC4A1APQ9BWU0 796 aaKnown RBP18.58■□□□□ 0.56
NAE1-217ENST00000567521 DNAJC5BQ9UF47 199 aa18.47■□□□□ 0.55
NAE1-217ENST00000567521 DCAF8L1A6NGE4 600 aa18.35■□□□□ 0.53
NAE1-217ENST00000567521 EHMT2Q96KQ7 1210 aa18.16■□□□□ 0.5
NAE1-217ENST00000567521 SLC4A2P04920 1241 aa17.97■□□□□ 0.47
NAE1-217ENST00000567521 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.93■□□□□ 0.464e-7■■■■□ 21.5
NAE1-217ENST00000567521 ZBTB22O15209 634 aa17.91■□□□□ 0.46
NAE1-217ENST00000567521 FOXD4L1Q9NU39 408 aa17.91■□□□□ 0.46
NAE1-217ENST00000567521 CSRNP3Q8WYN3 585 aa17.87■□□□□ 0.45
NAE1-217ENST00000567521 MYCNP04198 464 aaPredicted RBP17.62■□□□□ 0.41
NAE1-217ENST00000567521 U3KPZ7 1027 aaPredicted RBP17.61■□□□□ 0.41
NAE1-217ENST00000567521 RNF39Q9H2S5 420 aa17.54■□□□□ 0.4
NAE1-217ENST00000567521 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.44■□□□□ 0.38
NAE1-217ENST00000567521 HNRNPUL2Q1KMD3 747 aaKnown RBP17.44■□□□□ 0.38
NAE1-217ENST00000567521 SAMD1Q6SPF0 538 aaPredicted RBP17.38■□□□□ 0.37
NAE1-217ENST00000567521 C1QBPQ07021 282 aaKnown RBP17.35■□□□□ 0.37
NAE1-217ENST00000567521 ATXN8OSP0DMR3 200 aa17.27■□□□□ 0.36
NAE1-217ENST00000567521 CACNB1Q02641 598 aaPredicted RBP17.27■□□□□ 0.36
NAE1-217ENST00000567521 APLP2Q06481 763 aa17.25■□□□□ 0.35
NAE1-217ENST00000567521 ATF5Q9Y2D1 282 aaPredicted RBP17.13■□□□□ 0.33
NAE1-217ENST00000567521 SPINK5Q9NQ38 1064 aaPredicted RBP17.1■□□□□ 0.33
NAE1-217ENST00000567521 CAPN15O75808 1086 aa17.06■□□□□ 0.32
NAE1-217ENST00000567521 TRHP20396 242 aaPredicted RBP16.99■□□□□ 0.31
NAE1-217ENST00000567521 ZNF219Q9P2Y4 722 aaPredicted RBP16.99■□□□□ 0.31
NAE1-217ENST00000567521 ABCB7O75027 752 aa16.73■□□□□ 0.27
NAE1-217ENST00000567521 DSG3P32926 999 aa16.72■□□□□ 0.27
NAE1-217ENST00000567521 POLA2Q14181 598 aa16.72■□□□□ 0.27
NAE1-217ENST00000567521 ZBTB12Q9Y330 459 aaPredicted RBP16.46■□□□□ 0.23
NAE1-217ENST00000567521 FBLN2P98095 1184 aa16.44■□□□□ 0.22
NAE1-217ENST00000567521 MKRN4PQ13434 485 aaPredicted RBP16.38■□□□□ 0.21
NAE1-217ENST00000567521 FKBP8Q14318 412 aa16.18■□□□□ 0.18
NAE1-217ENST00000567521 OSCARQ8IYS5 282 aa16.16■□□□□ 0.18
NAE1-217ENST00000567521 SPDYE4A6NLX3 237 aa16.08■□□□□ 0.16
NAE1-217ENST00000567521 SPDYE2BA6NHP3 402 aa16.02■□□□□ 0.16
NAE1-217ENST00000567521 SPDYE6P0CI01 402 aa16.02■□□□□ 0.16
NAE1-217ENST00000567521 SPDYE2Q495Y8 402 aa16.02■□□□□ 0.16
NAE1-217ENST00000567521 ZNF692Q9BU19 519 aaPredicted RBP15.98■□□□□ 0.15
NAE1-217ENST00000567521 RBM42Q9BTD8 480 aaKnown RBP15.95■□□□□ 0.14
NAE1-217ENST00000567521 SSUH2Q9Y2M2 353 aa15.88■□□□□ 0.13
NAE1-217ENST00000567521 PROM2Q8N271 834 aa15.8■□□□□ 0.12
NAE1-217ENST00000567521 AKT1S1Q96B36 256 aa15.77■□□□□ 0.12
NAE1-217ENST00000567521 PABPN1Q86U42 306 aaKnown RBP eCLIP15.76■□□□□ 0.11
NAE1-217ENST00000567521 REM2Q8IYK8 340 aaPredicted RBP15.61■□□□□ 0.09
NAE1-217ENST00000567521 POTEHQ6S545 545 aa15.6■□□□□ 0.09
NAE1-217ENST00000567521 FBXO3Q9UK99 471 aa15.59■□□□□ 0.09
NAE1-217ENST00000567521 SPDYE1Q8NFV5 336 aaPredicted RBP15.53■□□□□ 0.08
NAE1-217ENST00000567521 STAG3Q9UJ98 1225 aa15.53■□□□□ 0.08
NAE1-217ENST00000567521 CLEC11AQ9Y240 323 aa15.47■□□□□ 0.07
NAE1-217ENST00000567521 PITPNM1O00562 1244 aa15.43■□□□□ 0.06
NAE1-217ENST00000567521 VASPP50552 380 aaPredicted RBP15.36■□□□□ 0.05
NAE1-217ENST00000567521 PRR29P0C7W0 189 aa15.34■□□□□ 0.05
NAE1-217ENST00000567521 MIER1Q8N108 512 aa15.26■□□□□ 0.03
NAE1-217ENST00000567521 PLCD3Q8N3E9 789 aa15.26■□□□□ 0.03
NAE1-217ENST00000567521 CHRDL2Q6WN34 429 aa15.25■□□□□ 0.03
NAE1-217ENST00000567521 PLEKHG5O94827 1062 aa15.2■□□□□ 0.02
NAE1-217ENST00000567521 IFNLR1Q8IU57 520 aaPredicted RBP15.15■□□□□ 0.02
NAE1-217ENST00000567521 CREBZFQ9NS37 354 aa15.14■□□□□ 0.01
NAE1-217ENST00000567521 FXR2P51116 673 aaKnown RBP eCLIP15.12■□□□□ 0.01
NAE1-217ENST00000567521 KLHL34Q8N239 644 aa15.11■□□□□ 0.01
NAE1-217ENST00000567521 CHADLQ6NUI6 762 aa15.07■□□□□ 0
NAE1-217ENST00000567521 PIP4P2Q8N4L2 257 aa15.07■□□□□ 0
NAE1-217ENST00000567521 ZBTB47Q9UFB7 747 aaPredicted RBP15.07■□□□□ 0
NAE1-217ENST00000567521 PRKAR2AP13861 404 aaKnown RBP15.05■□□□□ -0
NAE1-217ENST00000567521 MNX1P50219 401 aaPredicted RBP14.97□□□□□ -0.01
NAE1-217ENST00000567521 SPOCK2Q92563 424 aa14.97□□□□□ -0.01
NAE1-217ENST00000567521 FARP1Q9Y4F1 1045 aaPredicted RBP14.94□□□□□ -0.02
NAE1-217ENST00000567521 NPM1P06748 294 aaKnown RBP eCLIP14.92□□□□□ -0.02
NAE1-217ENST00000567521 AMER1Q5JTC6 1135 aaPredicted RBP14.89□□□□□ -0.03
NAE1-217ENST00000567521 NUBP1P53384 320 aa14.83□□□□□ -0.04
NAE1-217ENST00000567521 RTN4Q9NQC3 1192 aaKnown RBP14.83□□□□□ -0.04
NAE1-217ENST00000567521 RASEFQ8IZ41 740 aa14.75□□□□□ -0.05
NAE1-217ENST00000567521 CIZ1Q9ULV3 898 aaPredicted RBP14.75□□□□□ -0.05
NAE1-217ENST00000567521 FAM212AQ96EL1 285 aa14.74□□□□□ -0.05
NAE1-217ENST00000567521 DCAF8Q5TAQ9 597 aa14.72□□□□□ -0.05
NAE1-217ENST00000567521 GSE1Q14687 1217 aa14.71□□□□□ -0.05
NAE1-217ENST00000567521 TSPYL2Q9H2G4 693 aaPredicted RBP14.68□□□□□ -0.06
NAE1-217ENST00000567521 PKD2Q13563 968 aa14.67□□□□□ -0.06
NAE1-217ENST00000567521 PAK3O75914 559 aaPredicted RBP14.65□□□□□ -0.06
NAE1-217ENST00000567521 CD44P16070 742 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 170.3 ms