RNA–Protein interactions for RNA: ENST00000536769.1

UBC-205, Transcript of ubiquitin C, humanhuman

APPRIS P1 BASIC

Gene UBC, Length 3,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-205ENST00000536769 NISCHQ9Y2I1 1504 aa29.03■■■□□ 2.24
UBC-205ENST00000536769 DCAF8L2P0C7V8 631 aa26.85■■□□□ 1.89
UBC-205ENST00000536769 SHROOM4Q9ULL8 1493 aa26.78■■□□□ 1.88
UBC-205ENST00000536769 SUPT5HO00267 1087 aaKnown RBP26.56■■□□□ 1.84
UBC-205ENST00000536769 EHMT2Q96KQ7 1210 aa25.28■■□□□ 1.64
UBC-205ENST00000536769 PCGF6Q9BYE7 350 aa25.03■■□□□ 1.6
UBC-205ENST00000536769 CHIC1Q5VXU3 224 aa24.87■■□□□ 1.57
UBC-205ENST00000536769 FAM9AQ8IZU1 332 aaPredicted RBP24.86■■□□□ 1.57
UBC-205ENST00000536769 LOC105371045A0A1W2PR82 267 aa24.79■■□□□ 1.56
UBC-205ENST00000536769 PPARGC1BQ86YN6 1023 aaKnown RBP24.46■■□□□ 1.51
UBC-205ENST00000536769 TTBK1Q5TCY1 1321 aaPredicted RBP24.33■■□□□ 1.49
UBC-205ENST00000536769 TRIM41Q8WV44 630 aa24.33■■□□□ 1.48
UBC-205ENST00000536769 ZCCHC6Q5VYS8 1495 aaKnown RBP24.31■■□□□ 1.48
UBC-205ENST00000536769 HRCP23327 699 aa24.27■■□□□ 1.48
UBC-205ENST00000536769 MYO15BQ96JP2 1530 aa24.24■■□□□ 1.47
UBC-205ENST00000536769 ABCC9O60706 1549 aa23.87■■□□□ 1.41
UBC-205ENST00000536769 TRIM26Q12899 539 aaPredicted RBP23.85■■□□□ 1.41
UBC-205ENST00000536769 RANGAP1P46060 587 aaPredicted RBP23.81■■□□□ 1.4
UBC-205ENST00000536769 CCDC180Q9P1Z9 1646 aa23.74■■□□□ 1.39
UBC-205ENST00000536769 SCRIBQ14160 1630 aa23.6■■□□□ 1.37
UBC-205ENST00000536769 CCER1Q8TC90 406 aaPredicted RBP23.55■■□□□ 1.36
UBC-205ENST00000536769 UBTFP17480 764 aaKnown RBP23.52■■□□□ 1.36
UBC-205ENST00000536769 PABPN1Q86U42 306 aaKnown RBP eCLIP23.51■■□□□ 1.35
UBC-205ENST00000536769 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.5■■□□□ 1.35
UBC-205ENST00000536769 RSF1Q96T23 1441 aaPredicted RBP23.36■■□□□ 1.33
UBC-205ENST00000536769 PELP1Q8IZL8 1130 aaKnown RBP23.32■■□□□ 1.32
UBC-205ENST00000536769 ZEB1P37275 1124 aaPredicted RBP23.29■■□□□ 1.32
UBC-205ENST00000536769 DCAF1Q9Y4B6 1507 aa23.19■■□□□ 1.3
UBC-205ENST00000536769 CECR2Q9BXF3 1484 aa23.18■■□□□ 1.3
UBC-205ENST00000536769 HNRNPUL2Q1KMD3 747 aaKnown RBP23.13■■□□□ 1.29
UBC-205ENST00000536769 APLP2Q06481 763 aa23.12■■□□□ 1.29
UBC-205ENST00000536769 YTHDC1Q96MU7 727 aaKnown RBP23.07■■□□□ 1.28
UBC-205ENST00000536769 RB1CC1Q8TDY2 1594 aa22.98■■□□□ 1.27
UBC-205ENST00000536769 ITGAEP38570 1179 aa22.85■■□□□ 1.25
UBC-205ENST00000536769 MROH2BQ7Z745 1585 aa22.84■■□□□ 1.25
UBC-205ENST00000536769 ATP1B4Q9UN42 357 aaPredicted RBP22.84■■□□□ 1.25
UBC-205ENST00000536769 CSRNP3Q8WYN3 585 aa22.81■■□□□ 1.24
UBC-205ENST00000536769 DIEXFQ68CQ4 756 aaKnown RBP22.79■■□□□ 1.24
UBC-205ENST00000536769 CENPBP07199 599 aaPredicted RBP22.63■■□□□ 1.21
UBC-205ENST00000536769 WIZO95785 1651 aa22.62■■□□□ 1.21
UBC-205ENST00000536769 SCAF1Q9H7N4 1312 aaKnown RBP22.59■■□□□ 1.21
UBC-205ENST00000536769 SOGA1O94964 1423 aa22.57■■□□□ 1.2
UBC-205ENST00000536769 ABCC8Q09428 1581 aa22.56■■□□□ 1.2
UBC-205ENST00000536769 MYT1Q01538 1121 aa22.56■■□□□ 1.2
UBC-205ENST00000536769 GTF3C3Q9Y5Q9 886 aa22.52■■□□□ 1.19
UBC-205ENST00000536769 CCDC88BA6NC98 1476 aa22.51■■□□□ 1.19
UBC-205ENST00000536769 NACADO15069 1562 aa22.5■■□□□ 1.19
UBC-205ENST00000536769 NEUROD1Q13562 356 aa22.49■■□□□ 1.19
UBC-205ENST00000536769 CEP162Q5TB80 1403 aa22.43■■□□□ 1.18
UBC-205ENST00000536769 P3H3Q8IVL6 736 aa22.38■■□□□ 1.17
UBC-205ENST00000536769 RUSC2Q8N2Y8 1516 aa22.37■■□□□ 1.17
UBC-205ENST00000536769 ACIN1Q9UKV3 1341 aaKnown RBP22.36■■□□□ 1.17
UBC-205ENST00000536769 ZNF316A6NFI3 1004 aaPredicted RBP22.35■■□□□ 1.17
UBC-205ENST00000536769 BAZ1AQ9NRL2 1556 aaPredicted RBP22.29■■□□□ 1.16
UBC-205ENST00000536769 MIER1Q8N108 512 aa22.22■■□□□ 1.15
UBC-205ENST00000536769 WRNQ14191 1432 aaPredicted RBP eCLIP22.21■■□□□ 1.159e-6■■■■■ 50.1
UBC-205ENST00000536769 FAM50AQ14320 339 aaKnown RBP22.19■■□□□ 1.14
UBC-205ENST00000536769 TNIKQ9UKE5 1360 aa22.16■■□□□ 1.14
UBC-205ENST00000536769 CLIP1P30622 1438 aa22.15■■□□□ 1.14
UBC-205ENST00000536769 ARID3CA6NKF2 412 aa22.04■■□□□ 1.12
UBC-205ENST00000536769 GOLGA3Q08378 1498 aa22.03■■□□□ 1.12
UBC-205ENST00000536769 CNGB1Q14028 1251 aaPredicted RBP22.02■■□□□ 1.11
UBC-205ENST00000536769 HIRIP3Q9BW71 556 aaPredicted RBP22.02■■□□□ 1.11
UBC-205ENST00000536769 KANK4Q5T7N3 995 aaPredicted RBP22.01■■□□□ 1.11
UBC-205ENST00000536769 TOP2AP11388 1531 aaKnown RBP21.97■■□□□ 1.11
UBC-205ENST00000536769 BAZ1BQ9UIG0 1483 aaKnown RBP21.96■■□□□ 1.11
UBC-205ENST00000536769 SMARCA4P51532 1647 aa21.94■■□□□ 1.1
UBC-205ENST00000536769 BCANQ96GW7 911 aa21.93■■□□□ 1.1
UBC-205ENST00000536769 SMARCA2P51531 1590 aa21.89■■□□□ 1.09
UBC-205ENST00000536769 EEA1Q15075 1411 aa21.86■■□□□ 1.09
UBC-205ENST00000536769 RAPGEF2Q9Y4G8 1499 aa21.85■■□□□ 1.09
UBC-205ENST00000536769 CEP164Q9UPV0 1460 aa21.84■■□□□ 1.09
UBC-205ENST00000536769 DDX10Q13206 875 aaKnown RBP21.79■■□□□ 1.08
UBC-205ENST00000536769 SIN3AQ96ST3 1273 aa21.75■■□□□ 1.07
UBC-205ENST00000536769 ATAD2BQ9ULI0 1458 aa21.73■■□□□ 1.07
UBC-205ENST00000536769 POLR3GLQ9BT43 218 aa21.72■■□□□ 1.07
UBC-205ENST00000536769 VPS8Q8N3P4 1428 aa21.7■■□□□ 1.06
UBC-205ENST00000536769 TRIM52Q96A61 297 aa21.67■■□□□ 1.06
UBC-205ENST00000536769 CHIC2Q9UKJ5 165 aa21.66■■□□□ 1.06
UBC-205ENST00000536769 KCNH8Q96L42 1107 aa21.6■■□□□ 1.05
UBC-205ENST00000536769 KIF27Q86VH2 1401 aa21.58■■□□□ 1.04
UBC-205ENST00000536769 SYNJ1O43426 1573 aa21.58■■□□□ 1.04
UBC-205ENST00000536769 NEFLP07196 543 aa21.54■■□□□ 1.04
UBC-205ENST00000536769 CUX2O14529 1486 aa21.51■■□□□ 1.03
UBC-205ENST00000536769 FBLN2P98095 1184 aa21.5■■□□□ 1.03
UBC-205ENST00000536769 RRP7BPQ9NSQ0 103 aa21.47■■□□□ 1.03
UBC-205ENST00000536769 CCNB3Q8WWL7 1395 aa21.47■■□□□ 1.03
UBC-205ENST00000536769 ZNF326Q5BKZ1 582 aaKnown RBP21.47■■□□□ 1.03
UBC-205ENST00000536769 SENP3-EIF4A1A0A087X0R7 540 aa21.46■■□□□ 1.03
UBC-205ENST00000536769 FKBP8Q14318 412 aa21.45■■□□□ 1.02
UBC-205ENST00000536769 CARMIL1Q5VZK9 1371 aa21.44■■□□□ 1.02
UBC-205ENST00000536769 BICRAQ9NZM4 1560 aa21.42■■□□□ 1.02
UBC-205ENST00000536769 ANP32CO43423 234 aa21.42■■□□□ 1.02
UBC-205ENST00000536769 DHX57Q6P158 1386 aaKnown RBP21.42■■□□□ 1.02
UBC-205ENST00000536769 KIF21BO75037 1637 aa21.38■■□□□ 1.01
UBC-205ENST00000536769 IRX6P78412 446 aaPredicted RBP21.37■■□□□ 1.01
UBC-205ENST00000536769 RAB3GAP2Q9H2M9 1393 aa21.36■■□□□ 1.01
UBC-205ENST00000536769 ZNF777Q9ULD5 760 aaPredicted RBP21.36■■□□□ 1.01
UBC-205ENST00000536769 EIF4G1Q04637 1599 aaKnown RBP21.34■■□□□ 1.01
UBC-205ENST00000536769 UNC13AQ9UPW8 1703 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms