RNA–Protein interactions for RNA: ENST00000470352.1

RPN2-208, Transcript of ribophorin II, humanhuman

TSL 2

Gene RPN2, Length 511 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN2-208ENST00000470352 NISCHQ9Y2I1 1504 aa29.48■■■□□ 2.31
RPN2-208ENST00000470352 CCDC180Q9P1Z9 1646 aa26.26■■□□□ 1.79
RPN2-208ENST00000470352 ABCC9O60706 1549 aa25.61■■□□□ 1.69
RPN2-208ENST00000470352 RB1CC1Q8TDY2 1594 aa24.7■■□□□ 1.54
RPN2-208ENST00000470352 NACADO15069 1562 aa24.67■■□□□ 1.54
RPN2-208ENST00000470352 ZCCHC6Q5VYS8 1495 aaKnown RBP24.58■■□□□ 1.53
RPN2-208ENST00000470352 MYO15BQ96JP2 1530 aa24.55■■□□□ 1.52
RPN2-208ENST00000470352 DCAF8L2P0C7V8 631 aa24.52■■□□□ 1.52
RPN2-208ENST00000470352 DCAF1Q9Y4B6 1507 aa24.44■■□□□ 1.5
RPN2-208ENST00000470352 UNC13AQ9UPW8 1703 aa24.1■■□□□ 1.45
RPN2-208ENST00000470352 SCRIBQ14160 1630 aa23.92■■□□□ 1.42
RPN2-208ENST00000470352 BICRAQ9NZM4 1560 aa23.91■■□□□ 1.42
RPN2-208ENST00000470352 PABPN1Q86U42 306 aaKnown RBP eCLIP23.88■■□□□ 1.41
RPN2-208ENST00000470352 SHROOM4Q9ULL8 1493 aa23.76■■□□□ 1.39
RPN2-208ENST00000470352 DNAJC5BQ9UF47 199 aa23.42■■□□□ 1.34
RPN2-208ENST00000470352 EIF4G1Q04637 1599 aaKnown RBP23.31■■□□□ 1.32
RPN2-208ENST00000470352 CC2D2AQ9P2K1 1620 aa23.19■■□□□ 1.3
RPN2-208ENST00000470352 CECR2Q9BXF3 1484 aa23.04■■□□□ 1.28
RPN2-208ENST00000470352 SMARCA4P51532 1647 aa22.89■■□□□ 1.25
RPN2-208ENST00000470352 BAZ1AQ9NRL2 1556 aaPredicted RBP22.88■■□□□ 1.25
RPN2-208ENST00000470352 SMARCA2P51531 1590 aa22.76■■□□□ 1.23
RPN2-208ENST00000470352 ATAD2BQ9ULI0 1458 aa22.74■■□□□ 1.23
RPN2-208ENST00000470352 NCAPD3P42695 1498 aa22.73■■□□□ 1.23
RPN2-208ENST00000470352 MROH2BQ7Z745 1585 aa22.69■■□□□ 1.22
RPN2-208ENST00000470352 PEG3Q9GZU2 1588 aa22.69■■□□□ 1.22
RPN2-208ENST00000470352 HMGXB3Q12766 1538 aa22.67■■□□□ 1.22
RPN2-208ENST00000470352 BAZ1BQ9UIG0 1483 aaKnown RBP22.58■■□□□ 1.2
RPN2-208ENST00000470352 WIZO95785 1651 aa22.45■■□□□ 1.18
RPN2-208ENST00000470352 RSF1Q96T23 1441 aaPredicted RBP22.43■■□□□ 1.18
RPN2-208ENST00000470352 TOP2AP11388 1531 aaKnown RBP22.26■■□□□ 1.15
RPN2-208ENST00000470352 LAMC3Q9Y6N6 1575 aa22.17■■□□□ 1.14
RPN2-208ENST00000470352 NESP48681 1621 aa22.16■■□□□ 1.14
RPN2-208ENST00000470352 ERCC6Q03468 1493 aa22.12■■□□□ 1.13
RPN2-208ENST00000470352 CADPSQ9ULU8 1353 aa22.06■■□□□ 1.12
RPN2-208ENST00000470352 PDS5BQ9NTI5 1447 aa22■■□□□ 1.11
RPN2-208ENST00000470352 CFTRP13569 1480 aa21.95■■□□□ 1.1
RPN2-208ENST00000470352 CCDC88BA6NC98 1476 aa21.94■■□□□ 1.1
RPN2-208ENST00000470352 KIF21AQ7Z4S6 1674 aa21.93■■□□□ 1.1
RPN2-208ENST00000470352 CUX2O14529 1486 aa21.91■■□□□ 1.1
RPN2-208ENST00000470352 THOC2Q8NI27 1593 aaKnown RBP21.88■■□□□ 1.09
RPN2-208ENST00000470352 FANCD2Q9BXW9 1451 aa21.83■■□□□ 1.08
RPN2-208ENST00000470352 PRDM2Q13029 1718 aa21.82■■□□□ 1.08
RPN2-208ENST00000470352 CEP164Q9UPV0 1460 aa21.82■■□□□ 1.08
RPN2-208ENST00000470352 SUPT5HO00267 1087 aaKnown RBP21.8■■□□□ 1.08
RPN2-208ENST00000470352 MRC2Q9UBG0 1479 aa21.78■■□□□ 1.08
RPN2-208ENST00000470352 WDR62O43379 1518 aa21.72■■□□□ 1.07
RPN2-208ENST00000470352 URB2Q14146 1524 aaKnown RBP21.6■■□□□ 1.05
RPN2-208ENST00000470352 ABCC8Q09428 1581 aa21.49■■□□□ 1.03
RPN2-208ENST00000470352 DNMBPQ6XZF7 1577 aa21.48■■□□□ 1.03
RPN2-208ENST00000470352 TOPBP1Q92547 1522 aa21.47■■□□□ 1.03
RPN2-208ENST00000470352 IFT140Q96RY7 1462 aa21.36■■□□□ 1.01
RPN2-208ENST00000470352 CUX1P39880 1505 aa21.3■■□□□ 1
RPN2-208ENST00000470352 POLA1P09884 1462 aaPredicted RBP21.29■■□□□ 1
RPN2-208ENST00000470352 TARBP1Q13395 1621 aaKnown RBP21.25■□□□□ 0.99
RPN2-208ENST00000470352 FGD5Q6ZNL6 1462 aa21.24■□□□□ 0.99
RPN2-208ENST00000470352 ZNF608Q9ULD9 1512 aaPredicted RBP21.21■□□□□ 0.99
RPN2-208ENST00000470352 EIF4G3O43432 1585 aaKnown RBP21.19■□□□□ 0.98
RPN2-208ENST00000470352 SOGA1O94964 1423 aa21.18■□□□□ 0.98
RPN2-208ENST00000470352 WRNQ14191 1432 aaPredicted RBP eCLIP21.18■□□□□ 0.98
RPN2-208ENST00000470352 RAD54L2Q9Y4B4 1467 aa21.16■□□□□ 0.98
RPN2-208ENST00000470352 TOP2BQ02880 1626 aa21.15■□□□□ 0.98
RPN2-208ENST00000470352 BIVM-ERCC5R4GMW8 1640 aa21.15■□□□□ 0.98
RPN2-208ENST00000470352 DNAJC5Q9H3Z4 198 aa21.15■□□□□ 0.98
RPN2-208ENST00000470352 WDR97A6NE52 1622 aa21.15■□□□□ 0.98
RPN2-208ENST00000470352 SYNJ1O43426 1573 aa21.12■□□□□ 0.97
RPN2-208ENST00000470352 AQRO60306 1485 aaKnown RBP eCLIP21.08■□□□□ 0.975e-7■■■■■ 56.2
RPN2-208ENST00000470352 ABCA10Q8WWZ4 1543 aa21.05■□□□□ 0.96
RPN2-208ENST00000470352 TDRD9Q8NDG6 1382 aaKnown RBP21.04■□□□□ 0.96
RPN2-208ENST00000470352 ABCA5Q8WWZ7 1642 aa20.97■□□□□ 0.95
RPN2-208ENST00000470352 GRIN2BQ13224 1484 aa20.97■□□□□ 0.95
RPN2-208ENST00000470352 GAPVD1Q14C86 1478 aa20.95■□□□□ 0.94
RPN2-208ENST00000470352 PBRM1Q86U86 1689 aa20.94■□□□□ 0.94
RPN2-208ENST00000470352 SNAPC4Q5SXM2 1469 aa20.93■□□□□ 0.94
RPN2-208ENST00000470352 MAGI1Q96QZ7 1491 aaPredicted RBP20.93■□□□□ 0.94
RPN2-208ENST00000470352 OSCARQ8IYS5 282 aa20.92■□□□□ 0.94
RPN2-208ENST00000470352 CHD1O14646 1710 aa20.9■□□□□ 0.94
RPN2-208ENST00000470352 SYNJ2O15056 1496 aa20.84■□□□□ 0.93
RPN2-208ENST00000470352 FBLN2P98095 1184 aa20.81■□□□□ 0.92
RPN2-208ENST00000470352 ERICH3Q5RHP9 1530 aa20.81■□□□□ 0.92
RPN2-208ENST00000470352 ADAMTS12P58397 1594 aa20.78■□□□□ 0.92
RPN2-208ENST00000470352 CHMP7Q8WUX9 453 aaPredicted RBP20.78■□□□□ 0.92
RPN2-208ENST00000470352 KIF27Q86VH2 1401 aa20.74■□□□□ 0.91
RPN2-208ENST00000470352 FHAD1B1AJZ9 1412 aa20.72■□□□□ 0.91
RPN2-208ENST00000470352 GRIN2AQ12879 1464 aa20.7■□□□□ 0.9
RPN2-208ENST00000470352 CLASP1Q7Z460 1538 aa20.69■□□□□ 0.9
RPN2-208ENST00000470352 CUL7Q14999 1698 aa20.64■□□□□ 0.89
RPN2-208ENST00000470352 ARHGEF11O15085 1522 aa20.63■□□□□ 0.89
RPN2-208ENST00000470352 RIMBP3CA6NJZ7 1639 aa20.63■□□□□ 0.89
RPN2-208ENST00000470352 RIMBP3BA6NNM3 1639 aa20.63■□□□□ 0.89
RPN2-208ENST00000470352 RIMBP3Q9UFD9 1639 aa20.63■□□□□ 0.89
RPN2-208ENST00000470352 TRIM41Q8WV44 630 aa20.61■□□□□ 0.89
RPN2-208ENST00000470352 NUP160Q12769 1436 aa20.61■□□□□ 0.89
RPN2-208ENST00000470352 IGF1RP08069 1367 aa20.6■□□□□ 0.89
RPN2-208ENST00000470352 CEP170Q5SW79 1584 aa20.59■□□□□ 0.89
RPN2-208ENST00000470352 CARMIL1Q5VZK9 1371 aa20.5■□□□□ 0.87
RPN2-208ENST00000470352 RUSC2Q8N2Y8 1516 aa20.48■□□□□ 0.87
RPN2-208ENST00000470352 SHROOM2Q13796 1616 aa20.46■□□□□ 0.87
RPN2-208ENST00000470352 ARAP1Q96P48 1450 aa20.46■□□□□ 0.87
RPN2-208ENST00000470352 RAPGEF2Q9Y4G8 1499 aa20.41■□□□□ 0.86
RPN2-208ENST00000470352 KIAA0586Q9BVV6 1533 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms