RNA–Protein interactions for RNA: ENST00000552831.1

TMPO-211, Transcript of thymopoietin, humanhuman

TSL 2

Gene TMPO, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPO-211ENST00000552831 AEBP2Q6ZN18 517 aaPredicted RBP25.14■■□□□ 1.62
TMPO-211ENST00000552831 CHIC1Q5VXU3 224 aa24.07■■□□□ 1.44
TMPO-211ENST00000552831 SENP3Q9H4L4 574 aaPredicted RBP21.67■■□□□ 1.06
TMPO-211ENST00000552831 PHF23Q9BUL5 403 aaPredicted RBP21.3■■□□□ 1
TMPO-211ENST00000552831 FOXD1Q16676 465 aa20.03■□□□□ 0.8
TMPO-211ENST00000552831 PLPPR3Q6T4P5 718 aa19.35■□□□□ 0.69
TMPO-211ENST00000552831 MSH5O43196 834 aa18.93■□□□□ 0.62
TMPO-211ENST00000552831 PIAS4Q8N2W9 510 aaPredicted RBP18.8■□□□□ 0.6
TMPO-211ENST00000552831 PPP6R1Q9UPN7 881 aa18.7■□□□□ 0.58
TMPO-211ENST00000552831 ADRA2BP18089 450 aa18.66■□□□□ 0.58
TMPO-211ENST00000552831 POTEDQ86YR6 584 aa18.21■□□□□ 0.51
TMPO-211ENST00000552831 SCAF1Q9H7N4 1312 aaKnown RBP17.38■□□□□ 0.37
TMPO-211ENST00000552831 DMRT2Q9Y5R5 561 aa17.14■□□□□ 0.33
TMPO-211ENST00000552831 MAPK8IP2Q13387 824 aaPredicted RBP17.08■□□□□ 0.32
TMPO-211ENST00000552831 PPP4R3CPQ6ZMV5 832 aa16.87■□□□□ 0.29
TMPO-211ENST00000552831 CNKSR2Q8WXI2 1034 aa16.63■□□□□ 0.25
TMPO-211ENST00000552831 HOXD11P31277 338 aaPredicted RBP16.54■□□□□ 0.24
TMPO-211ENST00000552831 RNF216Q9NWF9 866 aaPredicted RBP16.47■□□□□ 0.23
TMPO-211ENST00000552831 NCBP3Q53F19 620 aaKnown RBP16.4■□□□□ 0.22
TMPO-211ENST00000552831 DCAF8L1A6NGE4 600 aa16.39■□□□□ 0.21
TMPO-211ENST00000552831 CACNB1Q02641 598 aaPredicted RBP16.13■□□□□ 0.17
TMPO-211ENST00000552831 DNAJC5BQ9UF47 199 aa16.13■□□□□ 0.17
TMPO-211ENST00000552831 RNF39Q9H2S5 420 aa16.05■□□□□ 0.16
TMPO-211ENST00000552831 NPM3O75607 178 aaKnown RBP15.97■□□□□ 0.15
TMPO-211ENST00000552831 C1QBPQ07021 282 aaKnown RBP15.92■□□□□ 0.14
TMPO-211ENST00000552831 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.77■□□□□ 0.122e-6■■□□□ 12.1
TMPO-211ENST00000552831 KCNA4P22459 653 aa15.66■□□□□ 0.1
TMPO-211ENST00000552831 U3KPZ7 1027 aaPredicted RBP15.35■□□□□ 0.05
TMPO-211ENST00000552831 APLP2Q06481 763 aa15.23■□□□□ 0.03
TMPO-211ENST00000552831 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.19■□□□□ 0.02
TMPO-211ENST00000552831 SLC4A2P04920 1241 aa15.19■□□□□ 0.02
TMPO-211ENST00000552831 HNRNPUL2Q1KMD3 747 aaKnown RBP15.19■□□□□ 0.02
TMPO-211ENST00000552831 CAPN15O75808 1086 aa15.15■□□□□ 0.02
TMPO-211ENST00000552831 SPINK5Q9NQ38 1064 aaPredicted RBP15.06■□□□□ 0
TMPO-211ENST00000552831 SAMD1Q6SPF0 538 aaPredicted RBP15.04■□□□□ -0
TMPO-211ENST00000552831 DSG3P32926 999 aa15.02■□□□□ -0
TMPO-211ENST00000552831 ZNF219Q9P2Y4 722 aaPredicted RBP15□□□□□ -0.01
TMPO-211ENST00000552831 TRHP20396 242 aaPredicted RBP14.89□□□□□ -0.03
TMPO-211ENST00000552831 MYCNP04198 464 aaPredicted RBP14.88□□□□□ -0.03
TMPO-211ENST00000552831 SLC4A1APQ9BWU0 796 aaKnown RBP14.88□□□□□ -0.03
TMPO-211ENST00000552831 FOXD4L1Q9NU39 408 aa14.72□□□□□ -0.05
TMPO-211ENST00000552831 ABCB7O75027 752 aa14.69□□□□□ -0.06
TMPO-211ENST00000552831 POLA2Q14181 598 aa14.52□□□□□ -0.09
TMPO-211ENST00000552831 RBM42Q9BTD8 480 aaKnown RBP14.51□□□□□ -0.09
TMPO-211ENST00000552831 ZBTB12Q9Y330 459 aaPredicted RBP14.41□□□□□ -0.1
TMPO-211ENST00000552831 ATXN8OSP0DMR3 200 aa14.37□□□□□ -0.11
TMPO-211ENST00000552831 POTEHQ6S545 545 aa14.33□□□□□ -0.12
TMPO-211ENST00000552831 ATF5Q9Y2D1 282 aaPredicted RBP14.31□□□□□ -0.12
TMPO-211ENST00000552831 ZBTB22O15209 634 aa14.3□□□□□ -0.12
TMPO-211ENST00000552831 AKT1S1Q96B36 256 aa14.13□□□□□ -0.15
TMPO-211ENST00000552831 CHRDL2Q6WN34 429 aa14.04□□□□□ -0.16
TMPO-211ENST00000552831 FBLN2P98095 1184 aa14.02□□□□□ -0.17
TMPO-211ENST00000552831 OSCARQ8IYS5 282 aa13.99□□□□□ -0.17
TMPO-211ENST00000552831 REM2Q8IYK8 340 aaPredicted RBP13.9□□□□□ -0.18
TMPO-211ENST00000552831 SPDYE2BA6NHP3 402 aa13.89□□□□□ -0.19
TMPO-211ENST00000552831 SPDYE6P0CI01 402 aa13.89□□□□□ -0.19
TMPO-211ENST00000552831 SPDYE2Q495Y8 402 aa13.89□□□□□ -0.19
TMPO-211ENST00000552831 CSRNP3Q8WYN3 585 aa13.78□□□□□ -0.2
TMPO-211ENST00000552831 PITPNM1O00562 1244 aa13.71□□□□□ -0.21
TMPO-211ENST00000552831 MKRN4PQ13434 485 aaPredicted RBP13.69□□□□□ -0.22
TMPO-211ENST00000552831 ZNF692Q9BU19 519 aaPredicted RBP13.69□□□□□ -0.22
TMPO-211ENST00000552831 PIP4P2Q8N4L2 257 aa13.66□□□□□ -0.22
TMPO-211ENST00000552831 SPDYE1Q8NFV5 336 aaPredicted RBP13.65□□□□□ -0.22
TMPO-211ENST00000552831 FXR2P51116 673 aaKnown RBP eCLIP13.64□□□□□ -0.232e-7■■■□□ 15.2
TMPO-211ENST00000552831 SSUH2Q9Y2M2 353 aa13.63□□□□□ -0.23
TMPO-211ENST00000552831 EHMT2Q96KQ7 1210 aa13.59□□□□□ -0.23
TMPO-211ENST00000552831 CLEC11AQ9Y240 323 aa13.52□□□□□ -0.25
TMPO-211ENST00000552831 SP7Q8TDD2 431 aaPredicted RBP13.48□□□□□ -0.25
TMPO-211ENST00000552831 HAX1O00165 279 aa13.46□□□□□ -0.25
TMPO-211ENST00000552831 PABPN1Q86U42 306 aaKnown RBP eCLIP13.44□□□□□ -0.26
TMPO-211ENST00000552831 PRKAR2AP13861 404 aaKnown RBP13.39□□□□□ -0.27
TMPO-211ENST00000552831 PRR29P0C7W0 189 aa13.37□□□□□ -0.27
TMPO-211ENST00000552831 STAG3Q9UJ98 1225 aa13.26□□□□□ -0.29
TMPO-211ENST00000552831 SPDYE4A6NLX3 237 aa13.2□□□□□ -0.3
TMPO-211ENST00000552831 C19orf67A6NJJ6 358 aa13.19□□□□□ -0.3
TMPO-211ENST00000552831 CHADLQ6NUI6 762 aa13.15□□□□□ -0.3
TMPO-211ENST00000552831 EVX2Q03828 476 aa13.12□□□□□ -0.31
TMPO-211ENST00000552831 FARP1Q9Y4F1 1045 aaPredicted RBP13.08□□□□□ -0.32
TMPO-211ENST00000552831 CLCN6P51797 869 aa13.07□□□□□ -0.32
TMPO-211ENST00000552831 CD44P16070 742 aaKnown RBP12.98□□□□□ -0.33
TMPO-211ENST00000552831 GABBR2O75899 941 aa12.96□□□□□ -0.33
TMPO-211ENST00000552831 CREBZFQ9NS37 354 aa12.94□□□□□ -0.34
TMPO-211ENST00000552831 NPM1P06748 294 aaKnown RBP eCLIP12.89□□□□□ -0.35
TMPO-211ENST00000552831 PROM2Q8N271 834 aa12.87□□□□□ -0.35
TMPO-211ENST00000552831 PAK3O75914 559 aaPredicted RBP12.86□□□□□ -0.35
TMPO-211ENST00000552831 ZNF579Q8NAF0 562 aaKnown RBP12.82□□□□□ -0.36
TMPO-211ENST00000552831 ZRANB1Q9UGI0 708 aa12.81□□□□□ -0.36
TMPO-211ENST00000552831 PLEKHG5O94827 1062 aa12.77□□□□□ -0.37
TMPO-211ENST00000552831 DCBLD2Q96PD2 775 aa12.72□□□□□ -0.37
TMPO-211ENST00000552831 MNX1P50219 401 aaPredicted RBP12.71□□□□□ -0.37
TMPO-211ENST00000552831 LHX8Q68G74 356 aa12.64□□□□□ -0.39
TMPO-211ENST00000552831 MIER1Q8N108 512 aa12.62□□□□□ -0.39
TMPO-211ENST00000552831 POTEIP0CG38 1075 aa12.59□□□□□ -0.39
TMPO-211ENST00000552831 ZBTB47Q9UFB7 747 aaPredicted RBP12.59□□□□□ -0.39
TMPO-211ENST00000552831 GALR2O43603 387 aaPredicted RBP12.56□□□□□ -0.4
TMPO-211ENST00000552831 PHF12Q96QT6 1004 aa12.54□□□□□ -0.4
TMPO-211ENST00000552831 FKBP8Q14318 412 aa12.53□□□□□ -0.4
TMPO-211ENST00000552831 PLCD3Q8N3E9 789 aa12.53□□□□□ -0.4
TMPO-211ENST00000552831 TSPYL2Q9H2G4 693 aaPredicted RBP12.49□□□□□ -0.41
TMPO-211ENST00000552831 FBXO3Q9UK99 471 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms