RNA–Protein interactions for RNA: ENST00000469560.1

PMPCB-207, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,615 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-207ENST00000469560 AEBP2Q6ZN18 517 aaPredicted RBP18.95■□□□□ 0.62
PMPCB-207ENST00000469560 CHIC1Q5VXU3 224 aa18.08■□□□□ 0.48
PMPCB-207ENST00000469560 POTEDQ86YR6 584 aa17.18■□□□□ 0.34
PMPCB-207ENST00000469560 NISCHQ9Y2I1 1504 aa16.61■□□□□ 0.25
PMPCB-207ENST00000469560 SENP3Q9H4L4 574 aaPredicted RBP16.15■□□□□ 0.18
PMPCB-207ENST00000469560 PHF23Q9BUL5 403 aaPredicted RBP15.96■□□□□ 0.15
PMPCB-207ENST00000469560 FOXD1Q16676 465 aa15.14■□□□□ 0.01
PMPCB-207ENST00000469560 MSH5O43196 834 aa14.92□□□□□ -0.02
PMPCB-207ENST00000469560 CCDC180Q9P1Z9 1646 aa14.5□□□□□ -0.09
PMPCB-207ENST00000469560 PLPPR3Q6T4P5 718 aa14.49□□□□□ -0.09
PMPCB-207ENST00000469560 PPP6R1Q9UPN7 881 aa14.21□□□□□ -0.13
PMPCB-207ENST00000469560 ADRA2BP18089 450 aa14.17□□□□□ -0.14
PMPCB-207ENST00000469560 PIAS4Q8N2W9 510 aaPredicted RBP14.03□□□□□ -0.16
PMPCB-207ENST00000469560 ABCC9O60706 1549 aa13.95□□□□□ -0.18
PMPCB-207ENST00000469560 ZCCHC6Q5VYS8 1495 aaKnown RBP13.92□□□□□ -0.18
PMPCB-207ENST00000469560 CACNB1Q02641 598 aaPredicted RBP13.7□□□□□ -0.22
PMPCB-207ENST00000469560 DCAF1Q9Y4B6 1507 aa13.69□□□□□ -0.22
PMPCB-207ENST00000469560 DCAF8L2P0C7V8 631 aa13.68□□□□□ -0.22
PMPCB-207ENST00000469560 MYO15BQ96JP2 1530 aa13.59□□□□□ -0.23
PMPCB-207ENST00000469560 NACADO15069 1562 aa13.55□□□□□ -0.24
PMPCB-207ENST00000469560 RB1CC1Q8TDY2 1594 aa13.46□□□□□ -0.25
PMPCB-207ENST00000469560 SHROOM4Q9ULL8 1493 aa13.42□□□□□ -0.26
PMPCB-207ENST00000469560 SCRIBQ14160 1630 aa13.36□□□□□ -0.27
PMPCB-207ENST00000469560 UNC13AQ9UPW8 1703 aa13.3□□□□□ -0.28
PMPCB-207ENST00000469560 BICRAQ9NZM4 1560 aa13.22□□□□□ -0.29
PMPCB-207ENST00000469560 POTEHQ6S545 545 aa13.16□□□□□ -0.3
PMPCB-207ENST00000469560 PABPN1Q86U42 306 aaKnown RBP eCLIP13.13□□□□□ -0.31
PMPCB-207ENST00000469560 CECR2Q9BXF3 1484 aa12.99□□□□□ -0.33
PMPCB-207ENST00000469560 MAPK8IP2Q13387 824 aaPredicted RBP12.99□□□□□ -0.33
PMPCB-207ENST00000469560 MROH2BQ7Z745 1585 aa12.87□□□□□ -0.35
PMPCB-207ENST00000469560 RSF1Q96T23 1441 aaPredicted RBP12.84□□□□□ -0.35
PMPCB-207ENST00000469560 SMARCA4P51532 1647 aa12.8□□□□□ -0.36
PMPCB-207ENST00000469560 PPP4R3CPQ6ZMV5 832 aa12.79□□□□□ -0.36
PMPCB-207ENST00000469560 SCAF1Q9H7N4 1312 aaKnown RBP12.77□□□□□ -0.36
PMPCB-207ENST00000469560 BAZ1AQ9NRL2 1556 aaPredicted RBP12.77□□□□□ -0.37
PMPCB-207ENST00000469560 SUPT5HO00267 1087 aaKnown RBP12.76□□□□□ -0.37
PMPCB-207ENST00000469560 EIF4G1Q04637 1599 aaKnown RBP12.75□□□□□ -0.37
PMPCB-207ENST00000469560 WIZO95785 1651 aa12.74□□□□□ -0.37
PMPCB-207ENST00000469560 DMRT2Q9Y5R5 561 aa12.73□□□□□ -0.37
PMPCB-207ENST00000469560 EHMT2Q96KQ7 1210 aa12.73□□□□□ -0.37
PMPCB-207ENST00000469560 PEG3Q9GZU2 1588 aa12.65□□□□□ -0.38
PMPCB-207ENST00000469560 ATAD2BQ9ULI0 1458 aa12.64□□□□□ -0.39
PMPCB-207ENST00000469560 DNAJC5BQ9UF47 199 aa12.62□□□□□ -0.39
PMPCB-207ENST00000469560 CC2D2AQ9P2K1 1620 aa12.61□□□□□ -0.39
PMPCB-207ENST00000469560 NCAPD3P42695 1498 aa12.56□□□□□ -0.4
PMPCB-207ENST00000469560 KCNA4P22459 653 aa12.55□□□□□ -0.4
PMPCB-207ENST00000469560 SMARCA2P51531 1590 aa12.55□□□□□ -0.4
PMPCB-207ENST00000469560 TOP2AP11388 1531 aaKnown RBP12.54□□□□□ -0.4
PMPCB-207ENST00000469560 RNF39Q9H2S5 420 aa12.51□□□□□ -0.41
PMPCB-207ENST00000469560 BAZ1BQ9UIG0 1483 aaKnown RBP12.49□□□□□ -0.41
PMPCB-207ENST00000469560 HMGXB3Q12766 1538 aa12.49□□□□□ -0.41
PMPCB-207ENST00000469560 CCDC88BA6NC98 1476 aa12.46□□□□□ -0.41
PMPCB-207ENST00000469560 CNKSR2Q8WXI2 1034 aa12.44□□□□□ -0.42
PMPCB-207ENST00000469560 HOXD11P31277 338 aaPredicted RBP12.33□□□□□ -0.44
PMPCB-207ENST00000469560 C1QBPQ07021 282 aaKnown RBP12.3□□□□□ -0.44
PMPCB-207ENST00000469560 DCAF8L1A6NGE4 600 aa12.29□□□□□ -0.44
PMPCB-207ENST00000469560 RNF216Q9NWF9 866 aaPredicted RBP12.27□□□□□ -0.44
PMPCB-207ENST00000469560 NCBP3Q53F19 620 aaKnown RBP12.26□□□□□ -0.45
PMPCB-207ENST00000469560 NESP48681 1621 aa12.24□□□□□ -0.45
PMPCB-207ENST00000469560 CFTRP13569 1480 aa12.23□□□□□ -0.45
PMPCB-207ENST00000469560 CADPSQ9ULU8 1353 aa12.2□□□□□ -0.46
PMPCB-207ENST00000469560 NPM3O75607 178 aaKnown RBP12.19□□□□□ -0.46
PMPCB-207ENST00000469560 CSRNP3Q8WYN3 585 aa12.17□□□□□ -0.46
PMPCB-207ENST00000469560 ABCC8Q09428 1581 aa12.15□□□□□ -0.46
PMPCB-207ENST00000469560 LAMC3Q9Y6N6 1575 aa12.11□□□□□ -0.47
PMPCB-207ENST00000469560 PRDM2Q13029 1718 aa12.1□□□□□ -0.47
PMPCB-207ENST00000469560 FANCD2Q9BXW9 1451 aa12.06□□□□□ -0.48
PMPCB-207ENST00000469560 SYNJ1O43426 1573 aa12.06□□□□□ -0.48
PMPCB-207ENST00000469560 SLC4A1APQ9BWU0 796 aaKnown RBP12.05□□□□□ -0.48
PMPCB-207ENST00000469560 KIF21AQ7Z4S6 1674 aa12.05□□□□□ -0.48
PMPCB-207ENST00000469560 CUX1P39880 1505 aa12.03□□□□□ -0.48
PMPCB-207ENST00000469560 WRNQ14191 1432 aaPredicted RBP eCLIP12.01□□□□□ -0.49
PMPCB-207ENST00000469560 URB2Q14146 1524 aaKnown RBP11.99□□□□□ -0.49
PMPCB-207ENST00000469560 PDS5BQ9NTI5 1447 aa11.98□□□□□ -0.49
PMPCB-207ENST00000469560 CEP164Q9UPV0 1460 aa11.96□□□□□ -0.49
PMPCB-207ENST00000469560 TOP2BQ02880 1626 aa11.96□□□□□ -0.49
PMPCB-207ENST00000469560 BIVM-ERCC5R4GMW8 1640 aa11.96□□□□□ -0.49
PMPCB-207ENST00000469560 TRIM41Q8WV44 630 aa11.96□□□□□ -0.5
PMPCB-207ENST00000469560 TOPBP1Q92547 1522 aa11.93□□□□□ -0.5
PMPCB-207ENST00000469560 DNMBPQ6XZF7 1577 aa11.91□□□□□ -0.5
PMPCB-207ENST00000469560 THOC2Q8NI27 1593 aaKnown RBP11.91□□□□□ -0.5
PMPCB-207ENST00000469560 RUSC2Q8N2Y8 1516 aa11.91□□□□□ -0.5
PMPCB-207ENST00000469560 FGD5Q6ZNL6 1462 aa11.89□□□□□ -0.51
PMPCB-207ENST00000469560 MRC2Q9UBG0 1479 aa11.89□□□□□ -0.51
PMPCB-207ENST00000469560 SOGA1O94964 1423 aa11.89□□□□□ -0.51
PMPCB-207ENST00000469560 POLA1P09884 1462 aaPredicted RBP11.87□□□□□ -0.51
PMPCB-207ENST00000469560 WDR62O43379 1518 aa11.87□□□□□ -0.51
PMPCB-207ENST00000469560 ERCC6Q03468 1493 aa11.86□□□□□ -0.51
PMPCB-207ENST00000469560 RAD54L2Q9Y4B4 1467 aa11.86□□□□□ -0.51
PMPCB-207ENST00000469560 CUX2O14529 1486 aa11.86□□□□□ -0.51
PMPCB-207ENST00000469560 TARBP1Q13395 1621 aaKnown RBP11.81□□□□□ -0.52
PMPCB-207ENST00000469560 FAM9AQ8IZU1 332 aaPredicted RBP11.8□□□□□ -0.52
PMPCB-207ENST00000469560 WDR97A6NE52 1622 aa11.79□□□□□ -0.52
PMPCB-207ENST00000469560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.78□□□□□ -0.524e-6■■□□□ 14.1
PMPCB-207ENST00000469560 ABCA10Q8WWZ4 1543 aa11.76□□□□□ -0.53
PMPCB-207ENST00000469560 ZNF608Q9ULD9 1512 aaPredicted RBP11.75□□□□□ -0.53
PMPCB-207ENST00000469560 LOC105371045A0A1W2PR82 267 aa11.74□□□□□ -0.53
PMPCB-207ENST00000469560 TDRD9Q8NDG6 1382 aaKnown RBP11.74□□□□□ -0.53
PMPCB-207ENST00000469560 ABCA5Q8WWZ7 1642 aa11.71□□□□□ -0.54
PMPCB-207ENST00000469560 IGF1RP08069 1367 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms