RNA–Protein interactions for RNA: ENST00000475504.6

CDK1-205, Transcript of cyclin dependent kinase 1, humanhuman

TSL 2

Gene CDK1, Length 1,720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK1-205ENST00000475504 AEBP2Q6ZN18 517 aaPredicted RBP21.05■□□□□ 0.96
CDK1-205ENST00000475504 CHIC1Q5VXU3 224 aa19.9■□□□□ 0.78
CDK1-205ENST00000475504 SENP3Q9H4L4 574 aaPredicted RBP18.31■□□□□ 0.52
CDK1-205ENST00000475504 PHF23Q9BUL5 403 aaPredicted RBP17.85■□□□□ 0.45
CDK1-205ENST00000475504 POTEDQ86YR6 584 aa17.26■□□□□ 0.35
CDK1-205ENST00000475504 FOXD1Q16676 465 aa17.01■□□□□ 0.31
CDK1-205ENST00000475504 NISCHQ9Y2I1 1504 aa16.84■□□□□ 0.29
CDK1-205ENST00000475504 MSH5O43196 834 aa16.42■□□□□ 0.22
CDK1-205ENST00000475504 PIAS4Q8N2W9 510 aaPredicted RBP15.74■□□□□ 0.11
CDK1-205ENST00000475504 PPP6R1Q9UPN7 881 aa15.19■□□□□ 0.02
CDK1-205ENST00000475504 PLPPR3Q6T4P5 718 aa15.15■□□□□ 0.02
CDK1-205ENST00000475504 ADRA2BP18089 450 aa15.14■□□□□ 0.01
CDK1-205ENST00000475504 CCDC180Q9P1Z9 1646 aa14.81□□□□□ -0.04
CDK1-205ENST00000475504 CACNB1Q02641 598 aaPredicted RBP14.52□□□□□ -0.08
CDK1-205ENST00000475504 DMRT2Q9Y5R5 561 aa14.35□□□□□ -0.11
CDK1-205ENST00000475504 ZCCHC6Q5VYS8 1495 aaKnown RBP14.17□□□□□ -0.14
CDK1-205ENST00000475504 SCAF1Q9H7N4 1312 aaKnown RBP14.12□□□□□ -0.15
CDK1-205ENST00000475504 MAPK8IP2Q13387 824 aaPredicted RBP14.11□□□□□ -0.15
CDK1-205ENST00000475504 DCAF1Q9Y4B6 1507 aa13.98□□□□□ -0.17
CDK1-205ENST00000475504 ABCC9O60706 1549 aa13.88□□□□□ -0.19
CDK1-205ENST00000475504 MYO15BQ96JP2 1530 aa13.85□□□□□ -0.19
CDK1-205ENST00000475504 RNF39Q9H2S5 420 aa13.83□□□□□ -0.2
CDK1-205ENST00000475504 DCAF8L1A6NGE4 600 aa13.75□□□□□ -0.21
CDK1-205ENST00000475504 NACADO15069 1562 aa13.73□□□□□ -0.21
CDK1-205ENST00000475504 C1QBPQ07021 282 aaKnown RBP13.68□□□□□ -0.22
CDK1-205ENST00000475504 DCAF8L2P0C7V8 631 aa13.63□□□□□ -0.23
CDK1-205ENST00000475504 RB1CC1Q8TDY2 1594 aa13.61□□□□□ -0.23
CDK1-205ENST00000475504 SHROOM4Q9ULL8 1493 aa13.52□□□□□ -0.25
CDK1-205ENST00000475504 HOXD11P31277 338 aaPredicted RBP13.5□□□□□ -0.25
CDK1-205ENST00000475504 SCRIBQ14160 1630 aa13.5□□□□□ -0.25
CDK1-205ENST00000475504 UNC13AQ9UPW8 1703 aa13.46□□□□□ -0.25
CDK1-205ENST00000475504 POTEHQ6S545 545 aa13.4□□□□□ -0.26
CDK1-205ENST00000475504 DNAJC5BQ9UF47 199 aa13.36□□□□□ -0.27
CDK1-205ENST00000475504 BICRAQ9NZM4 1560 aa13.27□□□□□ -0.28
CDK1-205ENST00000475504 RNF216Q9NWF9 866 aaPredicted RBP13.21□□□□□ -0.3
CDK1-205ENST00000475504 CNKSR2Q8WXI2 1034 aa13.13□□□□□ -0.31
CDK1-205ENST00000475504 PPP4R3CPQ6ZMV5 832 aa13.11□□□□□ -0.31
CDK1-205ENST00000475504 CECR2Q9BXF3 1484 aa13.06□□□□□ -0.32
CDK1-205ENST00000475504 MROH2BQ7Z745 1585 aa13□□□□□ -0.33
CDK1-205ENST00000475504 BAZ1AQ9NRL2 1556 aaPredicted RBP13□□□□□ -0.33
CDK1-205ENST00000475504 RSF1Q96T23 1441 aaPredicted RBP13□□□□□ -0.33
CDK1-205ENST00000475504 SMARCA4P51532 1647 aa12.99□□□□□ -0.33
CDK1-205ENST00000475504 PABPN1Q86U42 306 aaKnown RBP eCLIP12.99□□□□□ -0.33
CDK1-205ENST00000475504 SUPT5HO00267 1087 aaKnown RBP12.92□□□□□ -0.34
CDK1-205ENST00000475504 WIZO95785 1651 aa12.91□□□□□ -0.34
CDK1-205ENST00000475504 PEG3Q9GZU2 1588 aa12.88□□□□□ -0.35
CDK1-205ENST00000475504 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.88□□□□□ -0.351e-10■□□□□ 10.7
CDK1-205ENST00000475504 EIF4G1Q04637 1599 aaKnown RBP12.82□□□□□ -0.36
CDK1-205ENST00000475504 TOP2AP11388 1531 aaKnown RBP12.79□□□□□ -0.36
CDK1-205ENST00000475504 SMARCA2P51531 1590 aa12.74□□□□□ -0.37
CDK1-205ENST00000475504 ATAD2BQ9ULI0 1458 aa12.74□□□□□ -0.37
CDK1-205ENST00000475504 HMGXB3Q12766 1538 aa12.68□□□□□ -0.38
CDK1-205ENST00000475504 DSG3P32926 999 aa12.66□□□□□ -0.38
CDK1-205ENST00000475504 NCAPD3P42695 1498 aa12.64□□□□□ -0.39
CDK1-205ENST00000475504 CC2D2AQ9P2K1 1620 aa12.64□□□□□ -0.39
CDK1-205ENST00000475504 BAZ1BQ9UIG0 1483 aaKnown RBP12.64□□□□□ -0.39
CDK1-205ENST00000475504 CCDC88BA6NC98 1476 aa12.59□□□□□ -0.39
CDK1-205ENST00000475504 CAPN15O75808 1086 aa12.57□□□□□ -0.4
CDK1-205ENST00000475504 NCBP3Q53F19 620 aaKnown RBP12.51□□□□□ -0.41
CDK1-205ENST00000475504 SPINK5Q9NQ38 1064 aaPredicted RBP12.43□□□□□ -0.42
CDK1-205ENST00000475504 PRDM2Q13029 1718 aa12.43□□□□□ -0.42
CDK1-205ENST00000475504 U3KPZ7 1027 aaPredicted RBP12.42□□□□□ -0.42
CDK1-205ENST00000475504 CFTRP13569 1480 aa12.35□□□□□ -0.43
CDK1-205ENST00000475504 ABCC8Q09428 1581 aa12.32□□□□□ -0.44
CDK1-205ENST00000475504 APLP2Q06481 763 aa12.29□□□□□ -0.44
CDK1-205ENST00000475504 RBM42Q9BTD8 480 aaKnown RBP12.27□□□□□ -0.45
CDK1-205ENST00000475504 CADPSQ9ULU8 1353 aa12.26□□□□□ -0.45
CDK1-205ENST00000475504 LAMC3Q9Y6N6 1575 aa12.25□□□□□ -0.45
CDK1-205ENST00000475504 SYNJ1O43426 1573 aa12.25□□□□□ -0.45
CDK1-205ENST00000475504 BIVM-ERCC5R4GMW8 1640 aa12.24□□□□□ -0.45
CDK1-205ENST00000475504 WRNQ14191 1432 aaPredicted RBP eCLIP12.21□□□□□ -0.45
CDK1-205ENST00000475504 TOP2BQ02880 1626 aa12.21□□□□□ -0.45
CDK1-205ENST00000475504 NESP48681 1621 aa12.21□□□□□ -0.46
CDK1-205ENST00000475504 SP7Q8TDD2 431 aaPredicted RBP12.2□□□□□ -0.46
CDK1-205ENST00000475504 ZNF219Q9P2Y4 722 aaPredicted RBP12.2□□□□□ -0.46
CDK1-205ENST00000475504 CHRDL2Q6WN34 429 aa12.19□□□□□ -0.46
CDK1-205ENST00000475504 TRIM41Q8WV44 630 aa12.17□□□□□ -0.46
CDK1-205ENST00000475504 CUX1P39880 1505 aa12.17□□□□□ -0.46
CDK1-205ENST00000475504 FANCD2Q9BXW9 1451 aa12.15□□□□□ -0.47
CDK1-205ENST00000475504 KIF21AQ7Z4S6 1674 aa12.14□□□□□ -0.47
CDK1-205ENST00000475504 NPM3O75607 178 aaKnown RBP12.13□□□□□ -0.47
CDK1-205ENST00000475504 TRHP20396 242 aaPredicted RBP12.13□□□□□ -0.47
CDK1-205ENST00000475504 ABCB7O75027 752 aa12.11□□□□□ -0.47
CDK1-205ENST00000475504 DNMBPQ6XZF7 1577 aa12.09□□□□□ -0.47
CDK1-205ENST00000475504 CEP164Q9UPV0 1460 aa12.08□□□□□ -0.48
CDK1-205ENST00000475504 PDS5BQ9NTI5 1447 aa12.06□□□□□ -0.48
CDK1-205ENST00000475504 TOPBP1Q92547 1522 aa12.04□□□□□ -0.48
CDK1-205ENST00000475504 URB2Q14146 1524 aaKnown RBP12.04□□□□□ -0.48
CDK1-205ENST00000475504 SOGA1O94964 1423 aa12.03□□□□□ -0.48
CDK1-205ENST00000475504 RUSC2Q8N2Y8 1516 aa12.02□□□□□ -0.49
CDK1-205ENST00000475504 EEA1Q15075 1411 aa12.02□□□□□ -0.49
CDK1-205ENST00000475504 FGD5Q6ZNL6 1462 aa12.01□□□□□ -0.49
CDK1-205ENST00000475504 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.01□□□□□ -0.49
CDK1-205ENST00000475504 HNRNPUL2Q1KMD3 747 aaKnown RBP12.01□□□□□ -0.49
CDK1-205ENST00000475504 WDR97A6NE52 1622 aa12.01□□□□□ -0.49
CDK1-205ENST00000475504 POLA1P09884 1462 aaPredicted RBP11.98□□□□□ -0.49
CDK1-205ENST00000475504 THOC2Q8NI27 1593 aaKnown RBP11.98□□□□□ -0.49
CDK1-205ENST00000475504 MRC2Q9UBG0 1479 aa11.97□□□□□ -0.49
CDK1-205ENST00000475504 WDR62O43379 1518 aa11.96□□□□□ -0.49
CDK1-205ENST00000475504 KIF21BO75037 1637 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms