RNA–Protein interactions for RNA: ENST00000343315.9

TMPO-203, Transcript of thymopoietin, humanhuman

TSL 5 BASIC

Gene TMPO, Length 2,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPO-203ENST00000343315 NISCHQ9Y2I1 1504 aa32.95■■■□□ 2.87
TMPO-203ENST00000343315 CCDC180Q9P1Z9 1646 aa29.32■■■□□ 2.28
TMPO-203ENST00000343315 ABCC9O60706 1549 aa28.91■■■□□ 2.22
TMPO-203ENST00000343315 DCAF8L2P0C7V8 631 aa27.75■■■□□ 2.03
TMPO-203ENST00000343315 RB1CC1Q8TDY2 1594 aa27.7■■■□□ 2.03
TMPO-203ENST00000343315 NACADO15069 1562 aa27.62■■■□□ 2.01
TMPO-203ENST00000343315 ZCCHC6Q5VYS8 1495 aaKnown RBP27.41■■□□□ 1.98
TMPO-203ENST00000343315 MYO15BQ96JP2 1530 aa27.36■■□□□ 1.97
TMPO-203ENST00000343315 DCAF1Q9Y4B6 1507 aa27.21■■□□□ 1.95
TMPO-203ENST00000343315 UNC13AQ9UPW8 1703 aa27.06■■□□□ 1.92
TMPO-203ENST00000343315 PABPN1Q86U42 306 aaKnown RBP eCLIP27.02■■□□□ 1.92
TMPO-203ENST00000343315 HRCP23327 699 aa26.88■■□□□ 1.89
TMPO-203ENST00000343315 BICRAQ9NZM4 1560 aa26.85■■□□□ 1.89
TMPO-203ENST00000343315 SCRIBQ14160 1630 aa26.82■■□□□ 1.88
TMPO-203ENST00000343315 DNAJC5BQ9UF47 199 aa26.65■■□□□ 1.86
TMPO-203ENST00000343315 SHROOM4Q9ULL8 1493 aa26.51■■□□□ 1.83
TMPO-203ENST00000343315 PELP1Q8IZL8 1130 aaKnown RBP26.39■■□□□ 1.81
TMPO-203ENST00000343315 PPARGC1BQ86YN6 1023 aaKnown RBP26.23■■□□□ 1.79
TMPO-203ENST00000343315 EIF4G1Q04637 1599 aaKnown RBP26.18■■□□□ 1.78
TMPO-203ENST00000343315 PCGF6Q9BYE7 350 aa26.13■■□□□ 1.77
TMPO-203ENST00000343315 CC2D2AQ9P2K1 1620 aa26.12■■□□□ 1.77
TMPO-203ENST00000343315 CECR2Q9BXF3 1484 aa25.97■■□□□ 1.75
TMPO-203ENST00000343315 SUPT5HO00267 1087 aaKnown RBP25.93■■□□□ 1.74
TMPO-203ENST00000343315 CHIC1Q5VXU3 224 aa25.69■■□□□ 1.7
TMPO-203ENST00000343315 SMARCA4P51532 1647 aa25.6■■□□□ 1.69
TMPO-203ENST00000343315 BAZ1AQ9NRL2 1556 aaPredicted RBP25.56■■□□□ 1.68
TMPO-203ENST00000343315 SCAF1Q9H7N4 1312 aaKnown RBP25.55■■□□□ 1.68
TMPO-203ENST00000343315 ATAD2BQ9ULI0 1458 aa25.5■■□□□ 1.67
TMPO-203ENST00000343315 NCAPD3P42695 1498 aa25.49■■□□□ 1.67
TMPO-203ENST00000343315 MYT1Q01538 1121 aa25.46■■□□□ 1.67
TMPO-203ENST00000343315 SMARCA2P51531 1590 aa25.46■■□□□ 1.67
TMPO-203ENST00000343315 MROH2BQ7Z745 1585 aa25.41■■□□□ 1.66
TMPO-203ENST00000343315 HMGXB3Q12766 1538 aa25.34■■□□□ 1.65
TMPO-203ENST00000343315 PEG3Q9GZU2 1588 aa25.31■■□□□ 1.64
TMPO-203ENST00000343315 BAZ1BQ9UIG0 1483 aaKnown RBP25.31■■□□□ 1.64
TMPO-203ENST00000343315 TRIM26Q12899 539 aaPredicted RBP25.29■■□□□ 1.64
TMPO-203ENST00000343315 ZEB1P37275 1124 aaPredicted RBP25.21■■□□□ 1.63
TMPO-203ENST00000343315 WIZO95785 1651 aa25.15■■□□□ 1.62
TMPO-203ENST00000343315 RSF1Q96T23 1441 aaPredicted RBP25.07■■□□□ 1.6
TMPO-203ENST00000343315 LOC105371045A0A1W2PR82 267 aa25.07■■□□□ 1.6
TMPO-203ENST00000343315 NESP48681 1621 aa24.97■■□□□ 1.59
TMPO-203ENST00000343315 ERCC6Q03468 1493 aa24.95■■□□□ 1.58
TMPO-203ENST00000343315 ACIN1Q9UKV3 1341 aaKnown RBP24.87■■□□□ 1.57
TMPO-203ENST00000343315 TOP2AP11388 1531 aaKnown RBP24.84■■□□□ 1.57
TMPO-203ENST00000343315 LAMC3Q9Y6N6 1575 aa24.84■■□□□ 1.57
TMPO-203ENST00000343315 CADPSQ9ULU8 1353 aa24.77■■□□□ 1.56
TMPO-203ENST00000343315 NEUROD1Q13562 356 aa24.75■■□□□ 1.55
TMPO-203ENST00000343315 PDS5BQ9NTI5 1447 aa24.71■■□□□ 1.55
TMPO-203ENST00000343315 CUX2O14529 1486 aa24.66■■□□□ 1.54
TMPO-203ENST00000343315 GTF3C3Q9Y5Q9 886 aa24.65■■□□□ 1.54
TMPO-203ENST00000343315 KIF21AQ7Z4S6 1674 aa24.65■■□□□ 1.54
TMPO-203ENST00000343315 CFTRP13569 1480 aa24.58■■□□□ 1.52
TMPO-203ENST00000343315 CCDC88BA6NC98 1476 aa24.57■■□□□ 1.52
TMPO-203ENST00000343315 THOC2Q8NI27 1593 aaKnown RBP24.57■■□□□ 1.52
TMPO-203ENST00000343315 CENPBP07199 599 aaPredicted RBP24.52■■□□□ 1.52
TMPO-203ENST00000343315 FANCD2Q9BXW9 1451 aa24.49■■□□□ 1.51
TMPO-203ENST00000343315 CEP164Q9UPV0 1460 aa24.48■■□□□ 1.51
TMPO-203ENST00000343315 MRC2Q9UBG0 1479 aa24.45■■□□□ 1.5
TMPO-203ENST00000343315 WDR62O43379 1518 aa24.36■■□□□ 1.49
TMPO-203ENST00000343315 PRDM2Q13029 1718 aa24.36■■□□□ 1.49
TMPO-203ENST00000343315 DIEXFQ68CQ4 756 aaKnown RBP24.28■■□□□ 1.48
TMPO-203ENST00000343315 URB2Q14146 1524 aaKnown RBP24.24■■□□□ 1.47
TMPO-203ENST00000343315 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.12■■□□□ 1.45
TMPO-203ENST00000343315 CCER1Q8TC90 406 aaPredicted RBP24.11■■□□□ 1.45
TMPO-203ENST00000343315 DNAJC5Q9H3Z4 198 aa24.09■■□□□ 1.45
TMPO-203ENST00000343315 TOPBP1Q92547 1522 aa24.08■■□□□ 1.44
TMPO-203ENST00000343315 ABCC8Q09428 1581 aa24.05■■□□□ 1.44
TMPO-203ENST00000343315 DNMBPQ6XZF7 1577 aa24.03■■□□□ 1.44
TMPO-203ENST00000343315 TRIM41Q8WV44 630 aa23.99■■□□□ 1.43
TMPO-203ENST00000343315 TTBK1Q5TCY1 1321 aaPredicted RBP23.97■■□□□ 1.43
TMPO-203ENST00000343315 FAM9AQ8IZU1 332 aaPredicted RBP23.95■■□□□ 1.42
TMPO-203ENST00000343315 IFT140Q96RY7 1462 aa23.95■■□□□ 1.42
TMPO-203ENST00000343315 ZNF608Q9ULD9 1512 aaPredicted RBP23.88■■□□□ 1.41
TMPO-203ENST00000343315 POLA1P09884 1462 aaPredicted RBP23.87■■□□□ 1.41
TMPO-203ENST00000343315 YTHDC1Q96MU7 727 aaKnown RBP23.85■■□□□ 1.41
TMPO-203ENST00000343315 CUX1P39880 1505 aa23.84■■□□□ 1.41
TMPO-203ENST00000343315 TARBP1Q13395 1621 aaKnown RBP23.8■■□□□ 1.4
TMPO-203ENST00000343315 FGD5Q6ZNL6 1462 aa23.8■■□□□ 1.4
TMPO-203ENST00000343315 EHMT2Q96KQ7 1210 aa23.8■■□□□ 1.4
TMPO-203ENST00000343315 SOGA1O94964 1423 aa23.79■■□□□ 1.4
TMPO-203ENST00000343315 RAD54L2Q9Y4B4 1467 aa23.79■■□□□ 1.4
TMPO-203ENST00000343315 ZNF316A6NFI3 1004 aaPredicted RBP23.77■■□□□ 1.4
TMPO-203ENST00000343315 EIF4G3O43432 1585 aaKnown RBP23.77■■□□□ 1.4
TMPO-203ENST00000343315 AQRO60306 1485 aaKnown RBP eCLIP23.74■■□□□ 1.393e-6■■■■□ 24.3
TMPO-203ENST00000343315 BCL11AQ9H165 835 aa23.7■■□□□ 1.38
TMPO-203ENST00000343315 TDRD9Q8NDG6 1382 aaKnown RBP23.69■■□□□ 1.38
TMPO-203ENST00000343315 OSCARQ8IYS5 282 aa23.68■■□□□ 1.38
TMPO-203ENST00000343315 WRNQ14191 1432 aaPredicted RBP eCLIP23.66■■□□□ 1.38
TMPO-203ENST00000343315 MIER1Q8N108 512 aa23.62■■□□□ 1.37
TMPO-203ENST00000343315 SYNJ1O43426 1573 aa23.6■■□□□ 1.37
TMPO-203ENST00000343315 TOP2BQ02880 1626 aa23.6■■□□□ 1.37
TMPO-203ENST00000343315 ANP32EQ9BTT0 268 aa23.59■■□□□ 1.37
TMPO-203ENST00000343315 BIVM-ERCC5R4GMW8 1640 aa23.58■■□□□ 1.37
TMPO-203ENST00000343315 WDR97A6NE52 1622 aa23.57■■□□□ 1.36
TMPO-203ENST00000343315 FBLN2P98095 1184 aa23.56■■□□□ 1.36
TMPO-203ENST00000343315 ABCA10Q8WWZ4 1543 aa23.53■■□□□ 1.36
TMPO-203ENST00000343315 SNAPC4Q5SXM2 1469 aa23.51■■□□□ 1.35
TMPO-203ENST00000343315 GRIN2BQ13224 1484 aa23.5■■□□□ 1.35
TMPO-203ENST00000343315 GAPVD1Q14C86 1478 aa23.5■■□□□ 1.35
TMPO-203ENST00000343315 CHD1O14646 1710 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms