RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 NISCHQ9Y2I1 1504 aa35.83■■■■□ 3.33
LINC01088-201ENST00000437737 ABCC9O60706 1549 aa32.86■■■□□ 2.85
LINC01088-201ENST00000437737 CCDC180Q9P1Z9 1646 aa32.41■■■□□ 2.78
LINC01088-201ENST00000437737 DNAJC5BQ9UF47 199 aa31.17■■■□□ 2.58
LINC01088-201ENST00000437737 RB1CC1Q8TDY2 1594 aa31.08■■■□□ 2.57
LINC01088-201ENST00000437737 NACADO15069 1562 aa30.72■■■□□ 2.51
LINC01088-201ENST00000437737 DCAF8L2P0C7V8 631 aa30.51■■■□□ 2.47
LINC01088-201ENST00000437737 PABPN1Q86U42 306 aaKnown RBP eCLIP30.5■■■□□ 2.47
LINC01088-201ENST00000437737 UNC13AQ9UPW8 1703 aa30.42■■■□□ 2.46
LINC01088-201ENST00000437737 BICRAQ9NZM4 1560 aa30.15■■■□□ 2.42
LINC01088-201ENST00000437737 MYO15BQ96JP2 1530 aa30.1■■■□□ 2.41
LINC01088-201ENST00000437737 SHROOM4Q9ULL8 1493 aa29.69■■■□□ 2.34
LINC01088-201ENST00000437737 CC2D2AQ9P2K1 1620 aa29.67■■■□□ 2.34
LINC01088-201ENST00000437737 CECR2Q9BXF3 1484 aa29.64■■■□□ 2.34
LINC01088-201ENST00000437737 ZCCHC6Q5VYS8 1495 aaKnown RBP29.6■■■□□ 2.33
LINC01088-201ENST00000437737 DCAF1Q9Y4B6 1507 aa29.55■■■□□ 2.32
LINC01088-201ENST00000437737 SCRIBQ14160 1630 aa29.53■■■□□ 2.32
LINC01088-201ENST00000437737 EIF4G1Q04637 1599 aaKnown RBP29.47■■■□□ 2.31
LINC01088-201ENST00000437737 DNAJC5Q9H3Z4 198 aa28.98■■■□□ 2.23
LINC01088-201ENST00000437737 CUX2O14529 1486 aa28.5■■■□□ 2.15
LINC01088-201ENST00000437737 ERCC6Q03468 1493 aa28.43■■■□□ 2.14
LINC01088-201ENST00000437737 NCAPD3P42695 1498 aa28.34■■■□□ 2.13
LINC01088-201ENST00000437737 ATAD2BQ9ULI0 1458 aa28.2■■■□□ 2.1
LINC01088-201ENST00000437737 SMARCA2P51531 1590 aa28.12■■■□□ 2.09
LINC01088-201ENST00000437737 HMGXB3Q12766 1538 aa28.12■■■□□ 2.09
LINC01088-201ENST00000437737 SMARCA4P51532 1647 aa28.09■■■□□ 2.09
LINC01088-201ENST00000437737 NESP48681 1621 aa28.08■■■□□ 2.09
LINC01088-201ENST00000437737 BAZ1BQ9UIG0 1483 aaKnown RBP27.94■■■□□ 2.06
LINC01088-201ENST00000437737 THOC2Q8NI27 1593 aaKnown RBP27.91■■■□□ 2.06
LINC01088-201ENST00000437737 BAZ1AQ9NRL2 1556 aaPredicted RBP27.87■■■□□ 2.05
LINC01088-201ENST00000437737 LAMC3Q9Y6N6 1575 aa27.82■■■□□ 2.04
LINC01088-201ENST00000437737 PEG3Q9GZU2 1588 aa27.77■■■□□ 2.04
LINC01088-201ENST00000437737 KIF21AQ7Z4S6 1674 aa27.75■■■□□ 2.03
LINC01088-201ENST00000437737 PDS5BQ9NTI5 1447 aa27.67■■■□□ 2.02
LINC01088-201ENST00000437737 MROH2BQ7Z745 1585 aa27.61■■■□□ 2.01
LINC01088-201ENST00000437737 TRIM41Q8WV44 630 aa27.59■■■□□ 2.01
LINC01088-201ENST00000437737 MRC2Q9UBG0 1479 aa27.46■■□□□ 1.99
LINC01088-201ENST00000437737 CADPSQ9ULU8 1353 aa27.46■■□□□ 1.99
LINC01088-201ENST00000437737 WDR62O43379 1518 aa27.41■■□□□ 1.98
LINC01088-201ENST00000437737 WIZO95785 1651 aa27.3■■□□□ 1.96
LINC01088-201ENST00000437737 CEP164Q9UPV0 1460 aa27.26■■□□□ 1.95
LINC01088-201ENST00000437737 FANCD2Q9BXW9 1451 aa27.18■■□□□ 1.94
LINC01088-201ENST00000437737 OSCARQ8IYS5 282 aa27.11■■□□□ 1.93
LINC01088-201ENST00000437737 CFTRP13569 1480 aa27.05■■□□□ 1.92
LINC01088-201ENST00000437737 URB2Q14146 1524 aaKnown RBP26.97■■□□□ 1.91
LINC01088-201ENST00000437737 TOP2AP11388 1531 aaKnown RBP26.9■■□□□ 1.9
LINC01088-201ENST00000437737 RIMBP3CA6NJZ7 1639 aa26.86■■□□□ 1.89
LINC01088-201ENST00000437737 RIMBP3BA6NNM3 1639 aa26.86■■□□□ 1.89
LINC01088-201ENST00000437737 RIMBP3Q9UFD9 1639 aa26.86■■□□□ 1.89
LINC01088-201ENST00000437737 PRDM2Q13029 1718 aa26.85■■□□□ 1.89
LINC01088-201ENST00000437737 RSF1Q96T23 1441 aaPredicted RBP26.84■■□□□ 1.89
LINC01088-201ENST00000437737 IFT140Q96RY7 1462 aa26.73■■□□□ 1.87
LINC01088-201ENST00000437737 ZNF608Q9ULD9 1512 aaPredicted RBP26.72■■□□□ 1.87
LINC01088-201ENST00000437737 ARHGEF11O15085 1522 aa26.7■■□□□ 1.86
LINC01088-201ENST00000437737 TOPBP1Q92547 1522 aa26.61■■□□□ 1.85
LINC01088-201ENST00000437737 EIF4G3O43432 1585 aaKnown RBP26.59■■□□□ 1.85
LINC01088-201ENST00000437737 CCDC88BA6NC98 1476 aa26.58■■□□□ 1.85
LINC01088-201ENST00000437737 CHD1O14646 1710 aa26.52■■□□□ 1.84
LINC01088-201ENST00000437737 ABCC8Q09428 1581 aa26.52■■□□□ 1.84
LINC01088-201ENST00000437737 CYB5RLQ6IPT4 315 aa26.52■■□□□ 1.84
LINC01088-201ENST00000437737 DNMBPQ6XZF7 1577 aa26.49■■□□□ 1.83
LINC01088-201ENST00000437737 TRHP20396 242 aaPredicted RBP26.43■■□□□ 1.82
LINC01088-201ENST00000437737 AQRO60306 1485 aaKnown RBP eCLIP26.42■■□□□ 1.826e-6■■■■□ 25.1
LINC01088-201ENST00000437737 TARBP1Q13395 1621 aaKnown RBP26.41■■□□□ 1.82
LINC01088-201ENST00000437737 ARAP1Q96P48 1450 aa26.39■■□□□ 1.82
LINC01088-201ENST00000437737 FBLN2P98095 1184 aa26.38■■□□□ 1.81
LINC01088-201ENST00000437737 POLA1P09884 1462 aaPredicted RBP26.3■■□□□ 1.8
LINC01088-201ENST00000437737 RAD54L2Q9Y4B4 1467 aa26.23■■□□□ 1.79
LINC01088-201ENST00000437737 TDRD9Q8NDG6 1382 aaKnown RBP26.19■■□□□ 1.78
LINC01088-201ENST00000437737 SOGA1O94964 1423 aa26.17■■□□□ 1.78
LINC01088-201ENST00000437737 SNAPC4Q5SXM2 1469 aa26.17■■□□□ 1.78
LINC01088-201ENST00000437737 CLASP1Q7Z460 1538 aa26.14■■□□□ 1.77
LINC01088-201ENST00000437737 WDR97A6NE52 1622 aa26.12■■□□□ 1.77
LINC01088-201ENST00000437737 SYNJ1O43426 1573 aa26.12■■□□□ 1.77
LINC01088-201ENST00000437737 CHMP7Q8WUX9 453 aaPredicted RBP26.09■■□□□ 1.77
LINC01088-201ENST00000437737 FGD5Q6ZNL6 1462 aa26.09■■□□□ 1.77
LINC01088-201ENST00000437737 MAGI1Q96QZ7 1491 aaPredicted RBP26.06■■□□□ 1.76
LINC01088-201ENST00000437737 AEBP2Q6ZN18 517 aaPredicted RBP26.02■■□□□ 1.76
LINC01088-201ENST00000437737 GRIN2BQ13224 1484 aa26.01■■□□□ 1.75
LINC01088-201ENST00000437737 SYNJ2O15056 1496 aa25.98■■□□□ 1.75
LINC01088-201ENST00000437737 CUX1P39880 1505 aa25.97■■□□□ 1.75
LINC01088-201ENST00000437737 PBRM1Q86U86 1689 aa25.94■■□□□ 1.74
LINC01088-201ENST00000437737 GAPVD1Q14C86 1478 aa25.9■■□□□ 1.74
LINC01088-201ENST00000437737 ABCA5Q8WWZ7 1642 aa25.77■■□□□ 1.72
LINC01088-201ENST00000437737 ABCA10Q8WWZ4 1543 aa25.74■■□□□ 1.71
LINC01088-201ENST00000437737 ERCC6L2Q5T890 1561 aa25.7■■□□□ 1.71
LINC01088-201ENST00000437737 GRIN2AQ12879 1464 aa25.68■■□□□ 1.7
LINC01088-201ENST00000437737 CEP170Q5SW79 1584 aa25.64■■□□□ 1.69
LINC01088-201ENST00000437737 ADAMTS12P58397 1594 aa25.63■■□□□ 1.69
LINC01088-201ENST00000437737 NUP160Q12769 1436 aa25.58■■□□□ 1.69
LINC01088-201ENST00000437737 SHROOM2Q13796 1616 aa25.55■■□□□ 1.68
LINC01088-201ENST00000437737 WRNQ14191 1432 aaPredicted RBP eCLIP25.55■■□□□ 1.68
LINC01088-201ENST00000437737 KIF13AQ9H1H9 1805 aa25.52■■□□□ 1.68
LINC01088-201ENST00000437737 FHAD1B1AJZ9 1412 aa25.5■■□□□ 1.67
LINC01088-201ENST00000437737 BIVM-ERCC5R4GMW8 1640 aa25.47■■□□□ 1.67
LINC01088-201ENST00000437737 TOP2BQ02880 1626 aa25.45■■□□□ 1.66
LINC01088-201ENST00000437737 ERICH3Q5RHP9 1530 aa25.42■■□□□ 1.66
LINC01088-201ENST00000437737 PRG4Q92954 1404 aaPredicted RBP25.4■■□□□ 1.66
LINC01088-201ENST00000437737 SUPT5HO00267 1087 aaKnown RBP25.36■■□□□ 1.65
LINC01088-201ENST00000437737 JPH4Q96JJ6 628 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms