RNA–Protein interactions for RNA: ENST00000507761.1

LINC01088-204, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 842 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-204ENST00000507761 AEBP2Q6ZN18 517 aaPredicted RBP26■■□□□ 1.75
LINC01088-204ENST00000507761 CHIC1Q5VXU3 224 aa24.91■■□□□ 1.58
LINC01088-204ENST00000507761 SENP3Q9H4L4 574 aaPredicted RBP22.2■■□□□ 1.14
LINC01088-204ENST00000507761 PHF23Q9BUL5 403 aaPredicted RBP21.92■■□□□ 1.1
LINC01088-204ENST00000507761 FOXD1Q16676 465 aa20.63■□□□□ 0.89
LINC01088-204ENST00000507761 PLPPR3Q6T4P5 718 aa20.02■□□□□ 0.8
LINC01088-204ENST00000507761 PPP6R1Q9UPN7 881 aa19.43■□□□□ 0.7
LINC01088-204ENST00000507761 ADRA2BP18089 450 aa19.39■□□□□ 0.69
LINC01088-204ENST00000507761 PIAS4Q8N2W9 510 aaPredicted RBP19.34■□□□□ 0.69
LINC01088-204ENST00000507761 MSH5O43196 834 aa19.27■□□□□ 0.68
LINC01088-204ENST00000507761 POTEDQ86YR6 584 aa18.44■□□□□ 0.54
LINC01088-204ENST00000507761 SCAF1Q9H7N4 1312 aaKnown RBP17.8■□□□□ 0.44
LINC01088-204ENST00000507761 MAPK8IP2Q13387 824 aaPredicted RBP17.74■□□□□ 0.43
LINC01088-204ENST00000507761 DMRT2Q9Y5R5 561 aa17.62■□□□□ 0.41
LINC01088-204ENST00000507761 PPP4R3CPQ6ZMV5 832 aa17.56■□□□□ 0.4
LINC01088-204ENST00000507761 CNKSR2Q8WXI2 1034 aa17.2■□□□□ 0.34
LINC01088-204ENST00000507761 HOXD11P31277 338 aaPredicted RBP17.05■□□□□ 0.32
LINC01088-204ENST00000507761 RNF216Q9NWF9 866 aaPredicted RBP16.99■□□□□ 0.31
LINC01088-204ENST00000507761 NCBP3Q53F19 620 aaKnown RBP16.97■□□□□ 0.31
LINC01088-204ENST00000507761 DCAF8L1A6NGE4 600 aa16.89■□□□□ 0.29
LINC01088-204ENST00000507761 NPM3O75607 178 aaKnown RBP16.69■□□□□ 0.26
LINC01088-204ENST00000507761 KCNA4P22459 653 aa16.54■□□□□ 0.24
LINC01088-204ENST00000507761 DNAJC5BQ9UF47 199 aa16.45■□□□□ 0.22
LINC01088-204ENST00000507761 RNF39Q9H2S5 420 aa16.44■□□□□ 0.22
LINC01088-204ENST00000507761 CACNB1Q02641 598 aaPredicted RBP16.4■□□□□ 0.22
LINC01088-204ENST00000507761 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.26■□□□□ 0.19
LINC01088-204ENST00000507761 C1QBPQ07021 282 aaKnown RBP16.23■□□□□ 0.19
LINC01088-204ENST00000507761 U3KPZ7 1027 aaPredicted RBP15.92■□□□□ 0.14
LINC01088-204ENST00000507761 SLC4A2P04920 1241 aa15.88■□□□□ 0.13
LINC01088-204ENST00000507761 SLC4A1APQ9BWU0 796 aaKnown RBP15.67■□□□□ 0.1
LINC01088-204ENST00000507761 SPINK5Q9NQ38 1064 aaPredicted RBP15.62■□□□□ 0.09
LINC01088-204ENST00000507761 CAPN15O75808 1086 aa15.61■□□□□ 0.09
LINC01088-204ENST00000507761 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.58■□□□□ 0.08
LINC01088-204ENST00000507761 HNRNPUL2Q1KMD3 747 aaKnown RBP15.58■□□□□ 0.08
LINC01088-204ENST00000507761 APLP2Q06481 763 aa15.55■□□□□ 0.08
LINC01088-204ENST00000507761 SAMD1Q6SPF0 538 aaPredicted RBP15.49■□□□□ 0.07
LINC01088-204ENST00000507761 MYCNP04198 464 aaPredicted RBP15.46■□□□□ 0.07
LINC01088-204ENST00000507761 DSG3P32926 999 aa15.46■□□□□ 0.07
LINC01088-204ENST00000507761 TRHP20396 242 aaPredicted RBP15.41■□□□□ 0.06
LINC01088-204ENST00000507761 ZNF219Q9P2Y4 722 aaPredicted RBP15.4■□□□□ 0.06
LINC01088-204ENST00000507761 FOXD4L1Q9NU39 408 aa15.39■□□□□ 0.05
LINC01088-204ENST00000507761 ABCB7O75027 752 aa15.24■□□□□ 0.03
LINC01088-204ENST00000507761 ZBTB22O15209 634 aa15.19■□□□□ 0.02
LINC01088-204ENST00000507761 POLA2Q14181 598 aa15.04■□□□□ -0
LINC01088-204ENST00000507761 ATF5Q9Y2D1 282 aaPredicted RBP15.04■□□□□ -0
LINC01088-204ENST00000507761 ATXN8OSP0DMR3 200 aa14.92□□□□□ -0.02
LINC01088-204ENST00000507761 RBM42Q9BTD8 480 aaKnown RBP14.78□□□□□ -0.04
LINC01088-204ENST00000507761 ZBTB12Q9Y330 459 aaPredicted RBP14.78□□□□□ -0.04
LINC01088-204ENST00000507761 CSRNP3Q8WYN3 585 aa14.69□□□□□ -0.06
LINC01088-204ENST00000507761 EHMT2Q96KQ7 1210 aa14.61□□□□□ -0.07
LINC01088-204ENST00000507761 OSCARQ8IYS5 282 aa14.54□□□□□ -0.08
LINC01088-204ENST00000507761 FBLN2P98095 1184 aa14.5□□□□□ -0.09
LINC01088-204ENST00000507761 POTEHQ6S545 545 aa14.49□□□□□ -0.09
LINC01088-204ENST00000507761 AKT1S1Q96B36 256 aa14.48□□□□□ -0.09
LINC01088-204ENST00000507761 MKRN4PQ13434 485 aaPredicted RBP14.36□□□□□ -0.11
LINC01088-204ENST00000507761 CHRDL2Q6WN34 429 aa14.35□□□□□ -0.11
LINC01088-204ENST00000507761 SPDYE2BA6NHP3 402 aa14.32□□□□□ -0.12
LINC01088-204ENST00000507761 SPDYE6P0CI01 402 aa14.32□□□□□ -0.12
LINC01088-204ENST00000507761 SPDYE2Q495Y8 402 aa14.32□□□□□ -0.12
LINC01088-204ENST00000507761 REM2Q8IYK8 340 aaPredicted RBP14.32□□□□□ -0.12
LINC01088-204ENST00000507761 ZNF692Q9BU19 519 aaPredicted RBP14.18□□□□□ -0.14
LINC01088-204ENST00000507761 PITPNM1O00562 1244 aa14.16□□□□□ -0.14
LINC01088-204ENST00000507761 SSUH2Q9Y2M2 353 aa14.14□□□□□ -0.15
LINC01088-204ENST00000507761 PIP4P2Q8N4L2 257 aa14.05□□□□□ -0.16
LINC01088-204ENST00000507761 SPDYE1Q8NFV5 336 aaPredicted RBP14.03□□□□□ -0.16
LINC01088-204ENST00000507761 FXR2P51116 673 aaKnown RBP eCLIP14.01□□□□□ -0.17
LINC01088-204ENST00000507761 CLEC11AQ9Y240 323 aa13.98□□□□□ -0.17
LINC01088-204ENST00000507761 PABPN1Q86U42 306 aaKnown RBP eCLIP13.97□□□□□ -0.17
LINC01088-204ENST00000507761 SPDYE4A6NLX3 237 aa13.82□□□□□ -0.2
LINC01088-204ENST00000507761 PRKAR2AP13861 404 aaKnown RBP13.8□□□□□ -0.2
LINC01088-204ENST00000507761 PRR29P0C7W0 189 aa13.79□□□□□ -0.2
LINC01088-204ENST00000507761 HAX1O00165 279 aa13.76□□□□□ -0.21
LINC01088-204ENST00000507761 SP7Q8TDD2 431 aaPredicted RBP13.69□□□□□ -0.22
LINC01088-204ENST00000507761 CHADLQ6NUI6 762 aa13.67□□□□□ -0.22
LINC01088-204ENST00000507761 STAG3Q9UJ98 1225 aa13.66□□□□□ -0.22
LINC01088-204ENST00000507761 EVX2Q03828 476 aa13.56□□□□□ -0.24
LINC01088-204ENST00000507761 C19orf67A6NJJ6 358 aa13.55□□□□□ -0.24
LINC01088-204ENST00000507761 FARP1Q9Y4F1 1045 aaPredicted RBP13.51□□□□□ -0.25
LINC01088-204ENST00000507761 PROM2Q8N271 834 aa13.5□□□□□ -0.25
LINC01088-204ENST00000507761 CREBZFQ9NS37 354 aa13.47□□□□□ -0.25
LINC01088-204ENST00000507761 CD44P16070 742 aaKnown RBP13.38□□□□□ -0.27
LINC01088-204ENST00000507761 FKBP8Q14318 412 aa13.32□□□□□ -0.28
LINC01088-204ENST00000507761 GABBR2O75899 941 aa13.3□□□□□ -0.28
LINC01088-204ENST00000507761 NPM1P06748 294 aaKnown RBP eCLIP13.27□□□□□ -0.29
LINC01088-204ENST00000507761 MNX1P50219 401 aaPredicted RBP13.25□□□□□ -0.29
LINC01088-204ENST00000507761 ZRANB1Q9UGI0 708 aa13.22□□□□□ -0.29
LINC01088-204ENST00000507761 CLCN6P51797 869 aa13.21□□□□□ -0.29
LINC01088-204ENST00000507761 PAK3O75914 559 aaPredicted RBP13.19□□□□□ -0.3
LINC01088-204ENST00000507761 ZNF579Q8NAF0 562 aaKnown RBP13.18□□□□□ -0.3
LINC01088-204ENST00000507761 PLEKHG5O94827 1062 aa13.17□□□□□ -0.3
LINC01088-204ENST00000507761 MIER1Q8N108 512 aa13.16□□□□□ -0.3
LINC01088-204ENST00000507761 PLCD3Q8N3E9 789 aa13.09□□□□□ -0.31
LINC01088-204ENST00000507761 PHF12Q96QT6 1004 aa13.04□□□□□ -0.32
LINC01088-204ENST00000507761 FBXO3Q9UK99 471 aa13.03□□□□□ -0.32
LINC01088-204ENST00000507761 TSPYL2Q9H2G4 693 aaPredicted RBP13.01□□□□□ -0.33
LINC01088-204ENST00000507761 GALR2O43603 387 aaPredicted RBP13□□□□□ -0.33
LINC01088-204ENST00000507761 DCBLD2Q96PD2 775 aa13□□□□□ -0.33
LINC01088-204ENST00000507761 ZBTB47Q9UFB7 747 aaPredicted RBP13□□□□□ -0.33
LINC01088-204ENST00000507761 POTEIP0CG38 1075 aa12.99□□□□□ -0.33
LINC01088-204ENST00000507761 CCDC61Q9Y6R9 512 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms