RNA–Protein interactions for RNA: ENST00000430799.7

ARID1A-204, Transcript of AT-rich interaction domain 1A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARID1A, Length 6,521 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-204ENST00000430799 DCAF8L2P0C7V8 631 aa18.8■□□□□ 0.6
ARID1A-204ENST00000430799 NISCHQ9Y2I1 1504 aa17.98■□□□□ 0.47
ARID1A-204ENST00000430799 SUPT5HO00267 1087 aaKnown RBP17.89■□□□□ 0.45
ARID1A-204ENST00000430799 SHROOM4Q9ULL8 1493 aa17.42■□□□□ 0.38
ARID1A-204ENST00000430799 PELP1Q8IZL8 1130 aaKnown RBP17.31■□□□□ 0.36
ARID1A-204ENST00000430799 APLP2Q06481 763 aa17.25■□□□□ 0.35
ARID1A-204ENST00000430799 EHMT2Q96KQ7 1210 aa17.09■□□□□ 0.33
ARID1A-204ENST00000430799 FAM9AQ8IZU1 332 aaPredicted RBP17.07■□□□□ 0.32
ARID1A-204ENST00000430799 ZEB1P37275 1124 aaPredicted RBP16.74■□□□□ 0.27
ARID1A-204ENST00000430799 PCGF6Q9BYE7 350 aa16.69■□□□□ 0.26
ARID1A-204ENST00000430799 TRIM41Q8WV44 630 aa16.68■□□□□ 0.26
ARID1A-204ENST00000430799 CENPBP07199 599 aaPredicted RBP16.63■□□□□ 0.25
ARID1A-204ENST00000430799 TTBK1Q5TCY1 1321 aaPredicted RBP16.56■□□□□ 0.24
ARID1A-204ENST00000430799 CCER1Q8TC90 406 aaPredicted RBP16.53■□□□□ 0.24
ARID1A-204ENST00000430799 UBTFP17480 764 aaKnown RBP16.48■□□□□ 0.23
ARID1A-204ENST00000430799 RANGAP1P46060 587 aaPredicted RBP16.45■□□□□ 0.22
ARID1A-204ENST00000430799 ATP1B4Q9UN42 357 aaPredicted RBP16.41■□□□□ 0.22
ARID1A-204ENST00000430799 ERICH6Q7L0X2 663 aa16.39■□□□□ 0.21
ARID1A-204ENST00000430799 NEFLP07196 543 aa16.29■□□□□ 0.2
ARID1A-204ENST00000430799 TRIM26Q12899 539 aaPredicted RBP16.13■□□□□ 0.17
ARID1A-204ENST00000430799 MYT1Q01538 1121 aa16.06■□□□□ 0.16
ARID1A-204ENST00000430799 YTHDC1Q96MU7 727 aaKnown RBP15.99■□□□□ 0.15
ARID1A-204ENST00000430799 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.92■□□□□ 0.14
ARID1A-204ENST00000430799 HNRNPUL2Q1KMD3 747 aaKnown RBP15.92■□□□□ 0.14
ARID1A-204ENST00000430799 PPARGC1BQ86YN6 1023 aaKnown RBP15.91■□□□□ 0.14
ARID1A-204ENST00000430799 CHIC1Q5VXU3 224 aa15.91■□□□□ 0.14
ARID1A-204ENST00000430799 HRCP23327 699 aa15.88■□□□□ 0.13
ARID1A-204ENST00000430799 MYT1LQ9UL68 1186 aa15.85■□□□□ 0.13
ARID1A-204ENST00000430799 ITGAEP38570 1179 aa15.84■□□□□ 0.13
ARID1A-204ENST00000430799 DAXXQ9UER7 740 aaPredicted RBP15.79■□□□□ 0.12
ARID1A-204ENST00000430799 LOC105371045A0A1W2PR82 267 aa15.75■□□□□ 0.11
ARID1A-204ENST00000430799 POLR3GLQ9BT43 218 aa15.73■□□□□ 0.11
ARID1A-204ENST00000430799 DIEXFQ68CQ4 756 aaKnown RBP15.52■□□□□ 0.07
ARID1A-204ENST00000430799 FAM50AQ14320 339 aaKnown RBP15.51■□□□□ 0.07
ARID1A-204ENST00000430799 TRIM52Q96A61 297 aa15.47■□□□□ 0.07
ARID1A-204ENST00000430799 SLC4A1APQ9BWU0 796 aaKnown RBP15.46■□□□□ 0.07
ARID1A-204ENST00000430799 CNGB1Q14028 1251 aaPredicted RBP15.45■□□□□ 0.06
ARID1A-204ENST00000430799 CLSPNQ9HAW4 1339 aa15.42■□□□□ 0.06
ARID1A-204ENST00000430799 ABCC9O60706 1549 aa15.42■□□□□ 0.06
ARID1A-204ENST00000430799 RTL5Q5HYW3 569 aaPredicted RBP15.42■□□□□ 0.06
ARID1A-204ENST00000430799 PABPN1Q86U42 306 aaKnown RBP eCLIP15.41■□□□□ 0.06
ARID1A-204ENST00000430799 ZNF316A6NFI3 1004 aaPredicted RBP15.39■□□□□ 0.05
ARID1A-204ENST00000430799 ANP32CO43423 234 aa15.33■□□□□ 0.05
ARID1A-204ENST00000430799 NEUROD1Q13562 356 aa15.32■□□□□ 0.04
ARID1A-204ENST00000430799 CSRNP3Q8WYN3 585 aa15.27■□□□□ 0.04
ARID1A-204ENST00000430799 ZBTB47Q9UFB7 747 aaPredicted RBP15.23■□□□□ 0.03
ARID1A-204ENST00000430799 ZNF326Q5BKZ1 582 aaKnown RBP15.23■□□□□ 0.03
ARID1A-204ENST00000430799 CDK11AQ9UQ88 783 aaPredicted RBP15.21■□□□□ 0.03
ARID1A-204ENST00000430799 FBLN2P98095 1184 aa15.21■□□□□ 0.02
ARID1A-204ENST00000430799 NEFMP07197 916 aa15.17■□□□□ 0.02
ARID1A-204ENST00000430799 GTF3C3Q9Y5Q9 886 aa15.1■□□□□ 0.01
ARID1A-204ENST00000430799 CANXP27824 592 aaKnown RBP15.08■□□□□ 0
ARID1A-204ENST00000430799 BCANQ96GW7 911 aa15.06■□□□□ 0
ARID1A-204ENST00000430799 P3H3Q8IVL6 736 aa15.05■□□□□ -0
ARID1A-204ENST00000430799 ZNF777Q9ULD5 760 aaPredicted RBP15□□□□□ -0.01
ARID1A-204ENST00000430799 TONSLQ96HA7 1378 aa14.97□□□□□ -0.01
ARID1A-204ENST00000430799 ACIN1Q9UKV3 1341 aaKnown RBP14.96□□□□□ -0.01
ARID1A-204ENST00000430799 ARID3CA6NKF2 412 aa14.95□□□□□ -0.02
ARID1A-204ENST00000430799 ANP32AP39687 249 aaKnown RBP14.95□□□□□ -0.02
ARID1A-204ENST00000430799 ESF1Q9H501 851 aaKnown RBP14.94□□□□□ -0.02
ARID1A-204ENST00000430799 SLC24A1O60721 1099 aa14.91□□□□□ -0.02
ARID1A-204ENST00000430799 NPM1P06748 294 aaKnown RBP eCLIP14.89□□□□□ -0.03
ARID1A-204ENST00000430799 SCRIBQ14160 1630 aa14.89□□□□□ -0.03
ARID1A-204ENST00000430799 DCAF1Q9Y4B6 1507 aa14.87□□□□□ -0.03
ARID1A-204ENST00000430799 ZCCHC6Q5VYS8 1495 aaKnown RBP14.86□□□□□ -0.03
ARID1A-204ENST00000430799 STAG3Q9UJ98 1225 aa14.83□□□□□ -0.04
ARID1A-204ENST00000430799 TSPY4P0CV99 314 aa14.81□□□□□ -0.04
ARID1A-204ENST00000430799 TSPY10P0CW01 314 aa14.81□□□□□ -0.04
ARID1A-204ENST00000430799 UPF2Q9HAU5 1272 aaKnown RBP14.8□□□□□ -0.04
ARID1A-204ENST00000430799 CHGAP10645 457 aaKnown RBP14.79□□□□□ -0.04
ARID1A-204ENST00000430799 HNRNPUQ00839 825 aaKnown RBP eCLIP14.79□□□□□ -0.04
ARID1A-204ENST00000430799 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.76□□□□□ -0.05
ARID1A-204ENST00000430799 BCL11AQ9H165 835 aa14.76□□□□□ -0.05
ARID1A-204ENST00000430799 ANP32BQ92688 251 aaKnown RBP14.75□□□□□ -0.05
ARID1A-204ENST00000430799 MTUS2Q5JR59 1369 aa14.75□□□□□ -0.05
ARID1A-204ENST00000430799 DDX10Q13206 875 aaKnown RBP14.75□□□□□ -0.05
ARID1A-204ENST00000430799 FKBP8Q14318 412 aa14.74□□□□□ -0.05
ARID1A-204ENST00000430799 TMC1Q8TDI8 760 aa14.73□□□□□ -0.05
ARID1A-204ENST00000430799 EEA1Q15075 1411 aa14.72□□□□□ -0.05
ARID1A-204ENST00000430799 HSP90AA1P07900 732 aaKnown RBP14.72□□□□□ -0.05
ARID1A-204ENST00000430799 FAM9BQ8IZU0 186 aa14.71□□□□□ -0.06
ARID1A-204ENST00000430799 NPM2Q86SE8 214 aaKnown RBP14.7□□□□□ -0.06
ARID1A-204ENST00000430799 CHIC2Q9UKJ5 165 aa14.69□□□□□ -0.06
ARID1A-204ENST00000430799 CLIP1P30622 1438 aa14.68□□□□□ -0.06
ARID1A-204ENST00000430799 WDR43Q15061 677 aaKnown RBP eCLIP14.68□□□□□ -0.06
ARID1A-204ENST00000430799 CHMP7Q8WUX9 453 aaPredicted RBP14.66□□□□□ -0.06
ARID1A-204ENST00000430799 CCDC136Q96JN2 1154 aa14.66□□□□□ -0.06
ARID1A-204ENST00000430799 MRS2Q9HD23 443 aa14.65□□□□□ -0.06
ARID1A-204ENST00000430799 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.65□□□□□ -0.06
ARID1A-204ENST00000430799 RSF1Q96T23 1441 aaPredicted RBP14.64□□□□□ -0.07
ARID1A-204ENST00000430799 EIF4G2P78344 907 aaKnown RBP eCLIP14.63□□□□□ -0.07
ARID1A-204ENST00000430799 PLEKHD1A6NEE1 506 aa14.58□□□□□ -0.08
ARID1A-204ENST00000430799 KDM2AQ9Y2K7 1162 aa14.56□□□□□ -0.08
ARID1A-204ENST00000430799 GOLGA3Q08378 1498 aa14.56□□□□□ -0.08
ARID1A-204ENST00000430799 SALL2Q9Y467 1007 aaPredicted RBP14.55□□□□□ -0.08
ARID1A-204ENST00000430799 CCDC180Q9P1Z9 1646 aa14.55□□□□□ -0.08
ARID1A-204ENST00000430799 CDCA8Q53HL2 280 aa14.54□□□□□ -0.08
ARID1A-204ENST00000430799 MYH16Q9H6N6 1097 aa14.54□□□□□ -0.08
ARID1A-204ENST00000430799 RB1CC1Q8TDY2 1594 aa14.5□□□□□ -0.09
ARID1A-204ENST00000430799 WRNQ14191 1432 aaPredicted RBP eCLIP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms