RNA–Protein interactions for RNA: ENST00000336314.8

LARP1-201, Transcript of La ribonucleoprotein domain family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LARP1, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP1-201ENST00000336314 DCAF8L2P0C7V8 631 aa22.03■■□□□ 1.12
LARP1-201ENST00000336314 FAM9AQ8IZU1 332 aaPredicted RBP19.8■□□□□ 0.76
LARP1-201ENST00000336314 EHMT2Q96KQ7 1210 aa19.71■□□□□ 0.75
LARP1-201ENST00000336314 SUPT5HO00267 1087 aaKnown RBP19.69■□□□□ 0.74
LARP1-201ENST00000336314 SHROOM4Q9ULL8 1493 aa19.49■□□□□ 0.71
LARP1-201ENST00000336314 NISCHQ9Y2I1 1504 aa19.3■□□□□ 0.68
LARP1-201ENST00000336314 APLP2Q06481 763 aa19.26■□□□□ 0.67
LARP1-201ENST00000336314 ATP1B4Q9UN42 357 aaPredicted RBP19.13■□□□□ 0.65
LARP1-201ENST00000336314 RANGAP1P46060 587 aaPredicted RBP19.1■□□□□ 0.65
LARP1-201ENST00000336314 MYT1LQ9UL68 1186 aa18.98■□□□□ 0.63
LARP1-201ENST00000336314 TTBK1Q5TCY1 1321 aaPredicted RBP18.89■□□□□ 0.61
LARP1-201ENST00000336314 CHIC1Q5VXU3 224 aa18.66■□□□□ 0.58
LARP1-201ENST00000336314 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.6■□□□□ 0.57
LARP1-201ENST00000336314 HNRNPUL2Q1KMD3 747 aaKnown RBP18.6■□□□□ 0.57
LARP1-201ENST00000336314 PELP1Q8IZL8 1130 aaKnown RBP18.38■□□□□ 0.53
LARP1-201ENST00000336314 UBTFP17480 764 aaKnown RBP18.34■□□□□ 0.53
LARP1-201ENST00000336314 TRIM41Q8WV44 630 aa18.19■□□□□ 0.5
LARP1-201ENST00000336314 SLC4A1APQ9BWU0 796 aaKnown RBP18.12■□□□□ 0.49
LARP1-201ENST00000336314 FBLN2P98095 1184 aa18.08■□□□□ 0.49
LARP1-201ENST00000336314 PABPN1Q86U42 306 aaKnown RBP eCLIP18.03■□□□□ 0.48
LARP1-201ENST00000336314 POLR3GLQ9BT43 218 aa18■□□□□ 0.47
LARP1-201ENST00000336314 PLPPR3Q6T4P5 718 aa17.97■□□□□ 0.47
LARP1-201ENST00000336314 PCGF6Q9BYE7 350 aa17.96■□□□□ 0.47
LARP1-201ENST00000336314 ABCC9O60706 1549 aa17.96■□□□□ 0.47
LARP1-201ENST00000336314 BCANQ96GW7 911 aa17.93■□□□□ 0.46
LARP1-201ENST00000336314 ITGAEP38570 1179 aa17.88■□□□□ 0.45
LARP1-201ENST00000336314 CNGB1Q14028 1251 aaPredicted RBP17.75■□□□□ 0.43
LARP1-201ENST00000336314 CCER1Q8TC90 406 aaPredicted RBP17.73■□□□□ 0.43
LARP1-201ENST00000336314 ESF1Q9H501 851 aaKnown RBP17.73■□□□□ 0.43
LARP1-201ENST00000336314 ERICH6Q7L0X2 663 aa17.66■□□□□ 0.42
LARP1-201ENST00000336314 SLC24A1O60721 1099 aa17.66■□□□□ 0.42
LARP1-201ENST00000336314 PPARGC1BQ86YN6 1023 aaKnown RBP17.64■□□□□ 0.42
LARP1-201ENST00000336314 NPM1P06748 294 aaKnown RBP eCLIP17.54■□□□□ 0.41e-6■□□□□ 9.3
LARP1-201ENST00000336314 ARID3CA6NKF2 412 aa17.45■□□□□ 0.38
LARP1-201ENST00000336314 TRIM52Q96A61 297 aa17.42■□□□□ 0.38
LARP1-201ENST00000336314 NEFLP07196 543 aa17.42■□□□□ 0.38
LARP1-201ENST00000336314 STAG3Q9UJ98 1225 aa17.42■□□□□ 0.38
LARP1-201ENST00000336314 FAM50AQ14320 339 aaKnown RBP17.38■□□□□ 0.37
LARP1-201ENST00000336314 SCAF1Q9H7N4 1312 aaKnown RBP17.36■□□□□ 0.37
LARP1-201ENST00000336314 A0A0G2JS52 829 aa17.32■□□□□ 0.36
LARP1-201ENST00000336314 YTHDC1Q96MU7 727 aaKnown RBP17.27■□□□□ 0.35
LARP1-201ENST00000336314 ZNF326Q5BKZ1 582 aaKnown RBP17.26■□□□□ 0.35
LARP1-201ENST00000336314 TRHP20396 242 aaPredicted RBP17.25■□□□□ 0.35
LARP1-201ENST00000336314 ZNF777Q9ULD5 760 aaPredicted RBP17.24■□□□□ 0.35
LARP1-201ENST00000336314 DAXXQ9UER7 740 aaPredicted RBP17.24■□□□□ 0.35
LARP1-201ENST00000336314 CHGAP10645 457 aaKnown RBP17.22■□□□□ 0.35
LARP1-201ENST00000336314 BCL11AQ9H165 835 aa17.18■□□□□ 0.34
LARP1-201ENST00000336314 CENPBP07199 599 aaPredicted RBP17.16■□□□□ 0.34
LARP1-201ENST00000336314 P3H3Q8IVL6 736 aa17.15■□□□□ 0.34
LARP1-201ENST00000336314 PLEKHG5O94827 1062 aa17.13■□□□□ 0.33
LARP1-201ENST00000336314 NEFMP07197 916 aa17.11■□□□□ 0.33
LARP1-201ENST00000336314 ARID4BQ4LE39 1312 aaPredicted RBP17.11■□□□□ 0.33
LARP1-201ENST00000336314 ZEB1P37275 1124 aaPredicted RBP17.09■□□□□ 0.33
LARP1-201ENST00000336314 ZBTB47Q9UFB7 747 aaPredicted RBP17.09■□□□□ 0.33
LARP1-201ENST00000336314 CLSPNQ9HAW4 1339 aa17.08■□□□□ 0.33
LARP1-201ENST00000336314 C14orf37Q86TY3 774 aa17.07■□□□□ 0.32
LARP1-201ENST00000336314 SENP3Q9H4L4 574 aaPredicted RBP17.06■□□□□ 0.32
LARP1-201ENST00000336314 HAP1P54257 671 aaPredicted RBP17.02■□□□□ 0.32
LARP1-201ENST00000336314 ZBTB7CA1YPR0 619 aa17.02■□□□□ 0.31
LARP1-201ENST00000336314 NEUROD1Q13562 356 aa16.98■□□□□ 0.31
LARP1-201ENST00000336314 AEBP2Q6ZN18 517 aaPredicted RBP16.97■□□□□ 0.31
LARP1-201ENST00000336314 CDK11AQ9UQ88 783 aaPredicted RBP16.96■□□□□ 0.31
LARP1-201ENST00000336314 CHMP7Q8WUX9 453 aaPredicted RBP16.95■□□□□ 0.3
LARP1-201ENST00000336314 MYT1Q01538 1121 aa16.89■□□□□ 0.29
LARP1-201ENST00000336314 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.85■□□□□ 0.293e-8■■□□□ 12
LARP1-201ENST00000336314 CANXP27824 592 aaKnown RBP16.84■□□□□ 0.29
LARP1-201ENST00000336314 NPM2Q86SE8 214 aaKnown RBP16.84■□□□□ 0.29
LARP1-201ENST00000336314 ERCC6Q03468 1493 aa16.83■□□□□ 0.28
LARP1-201ENST00000336314 PPP1R15AO75807 674 aaPredicted RBP16.83■□□□□ 0.28
LARP1-201ENST00000336314 KCNH8Q96L42 1107 aa16.8■□□□□ 0.28
LARP1-201ENST00000336314 ZNF316A6NFI3 1004 aaPredicted RBP16.76■□□□□ 0.27
LARP1-201ENST00000336314 LOC105371045A0A1W2PR82 267 aa16.74■□□□□ 0.27
LARP1-201ENST00000336314 SCRIBQ14160 1630 aa16.7■□□□□ 0.26
LARP1-201ENST00000336314 ARXQ96QS3 562 aa16.67■□□□□ 0.26
LARP1-201ENST00000336314 NPHP1O15259 732 aa16.65■□□□□ 0.26
LARP1-201ENST00000336314 LMOD2Q6P5Q4 547 aa16.65■□□□□ 0.26
LARP1-201ENST00000336314 TRIM26Q12899 539 aaPredicted RBP16.61■□□□□ 0.25
LARP1-201ENST00000336314 MLECQ14165 292 aa16.56■□□□□ 0.24
LARP1-201ENST00000336314 TSPY4P0CV99 314 aa16.52■□□□□ 0.23
LARP1-201ENST00000336314 TSPY10P0CW01 314 aa16.52■□□□□ 0.23
LARP1-201ENST00000336314 CHIC2Q9UKJ5 165 aa16.47■□□□□ 0.23
LARP1-201ENST00000336314 ANP32CO43423 234 aa16.41■□□□□ 0.22
LARP1-201ENST00000336314 KDM2AQ9Y2K7 1162 aa16.4■□□□□ 0.22
LARP1-201ENST00000336314 CCDC9Q9Y3X0 531 aaKnown RBP16.38■□□□□ 0.21
LARP1-201ENST00000336314 PLEKHD1A6NEE1 506 aa16.37■□□□□ 0.21
LARP1-201ENST00000336314 PHF23Q9BUL5 403 aaPredicted RBP16.35■□□□□ 0.21
LARP1-201ENST00000336314 TULP1O00294 542 aaPredicted RBP16.33■□□□□ 0.21
LARP1-201ENST00000336314 RB1CC1Q8TDY2 1594 aa16.33■□□□□ 0.2
LARP1-201ENST00000336314 CSRNP3Q8WYN3 585 aa16.31■□□□□ 0.2
LARP1-201ENST00000336314 TMC1Q8TDI8 760 aa16.29■□□□□ 0.2
LARP1-201ENST00000336314 PPM1GO15355 546 aaPredicted RBP16.25■□□□□ 0.19
LARP1-201ENST00000336314 CDK11BP21127 795 aaKnown RBP16.22■□□□□ 0.19
LARP1-201ENST00000336314 MTUS2Q5JR59 1369 aa16.22■□□□□ 0.19
LARP1-201ENST00000336314 POGKQ9P215 609 aa16.22■□□□□ 0.19
LARP1-201ENST00000336314 RTL5Q5HYW3 569 aaPredicted RBP16.21■□□□□ 0.19
LARP1-201ENST00000336314 DCAF8L1A6NGE4 600 aa16.21■□□□□ 0.19
LARP1-201ENST00000336314 MEX3CQ5U5Q3 659 aaKnown RBP16.2■□□□□ 0.18
LARP1-201ENST00000336314 SALL2Q9Y467 1007 aaPredicted RBP16.2■□□□□ 0.18
LARP1-201ENST00000336314 HDGFP51858 240 aaKnown RBP16.17■□□□□ 0.18
LARP1-201ENST00000336314 WDR43Q15061 677 aaKnown RBP eCLIP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms