RNA–Protein interactions for RNA: ENST00000513153.5

LINC01088-210, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 695 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-210ENST00000513153 AEBP2Q6ZN18 517 aaPredicted RBP30.45■■■□□ 2.47
LINC01088-210ENST00000513153 CHIC1Q5VXU3 224 aa28.55■■■□□ 2.16
LINC01088-210ENST00000513153 SENP3Q9H4L4 574 aaPredicted RBP26.05■■□□□ 1.76
LINC01088-210ENST00000513153 PHF23Q9BUL5 403 aaPredicted RBP25.67■■□□□ 1.7
LINC01088-210ENST00000513153 FOXD1Q16676 465 aa24.33■■□□□ 1.49
LINC01088-210ENST00000513153 POTEDQ86YR6 584 aa23.04■■□□□ 1.28
LINC01088-210ENST00000513153 MSH5O43196 834 aa22.92■■□□□ 1.26
LINC01088-210ENST00000513153 PIAS4Q8N2W9 510 aaPredicted RBP22.66■■□□□ 1.22
LINC01088-210ENST00000513153 PLPPR3Q6T4P5 718 aa22.65■■□□□ 1.22
LINC01088-210ENST00000513153 PPP6R1Q9UPN7 881 aa22.45■■□□□ 1.18
LINC01088-210ENST00000513153 ADRA2BP18089 450 aa22.37■■□□□ 1.17
LINC01088-210ENST00000513153 MAPK8IP2Q13387 824 aaPredicted RBP20.67■□□□□ 0.9
LINC01088-210ENST00000513153 DMRT2Q9Y5R5 561 aa20.58■□□□□ 0.89
LINC01088-210ENST00000513153 SCAF1Q9H7N4 1312 aaKnown RBP20.48■□□□□ 0.87
LINC01088-210ENST00000513153 CACNB1Q02641 598 aaPredicted RBP19.95■□□□□ 0.78
LINC01088-210ENST00000513153 DCAF8L1A6NGE4 600 aa19.84■□□□□ 0.77
LINC01088-210ENST00000513153 PPP4R3CPQ6ZMV5 832 aa19.81■□□□□ 0.76
LINC01088-210ENST00000513153 HOXD11P31277 338 aaPredicted RBP19.67■□□□□ 0.74
LINC01088-210ENST00000513153 CNKSR2Q8WXI2 1034 aa19.52■□□□□ 0.72
LINC01088-210ENST00000513153 RNF39Q9H2S5 420 aa19.51■□□□□ 0.71
LINC01088-210ENST00000513153 RNF216Q9NWF9 866 aaPredicted RBP19.42■□□□□ 0.7
LINC01088-210ENST00000513153 C1QBPQ07021 282 aaKnown RBP19.21■□□□□ 0.67
LINC01088-210ENST00000513153 DNAJC5BQ9UF47 199 aa19.04■□□□□ 0.64
LINC01088-210ENST00000513153 NCBP3Q53F19 620 aaKnown RBP18.93■□□□□ 0.62
LINC01088-210ENST00000513153 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.8■□□□□ 0.6
LINC01088-210ENST00000513153 NPM3O75607 178 aaKnown RBP18.64■□□□□ 0.57
LINC01088-210ENST00000513153 U3KPZ7 1027 aaPredicted RBP18.32■□□□□ 0.52
LINC01088-210ENST00000513153 CAPN15O75808 1086 aa18.2■□□□□ 0.5
LINC01088-210ENST00000513153 SPINK5Q9NQ38 1064 aaPredicted RBP18.19■□□□□ 0.5
LINC01088-210ENST00000513153 DSG3P32926 999 aa18.15■□□□□ 0.5
LINC01088-210ENST00000513153 POTEHQ6S545 545 aa17.99■□□□□ 0.47
LINC01088-210ENST00000513153 KCNA4P22459 653 aa17.94■□□□□ 0.46
LINC01088-210ENST00000513153 SLC4A2P04920 1241 aa17.89■□□□□ 0.45
LINC01088-210ENST00000513153 TRHP20396 242 aaPredicted RBP17.82■□□□□ 0.44
LINC01088-210ENST00000513153 APLP2Q06481 763 aa17.79■□□□□ 0.44
LINC01088-210ENST00000513153 ABCB7O75027 752 aa17.75■□□□□ 0.43
LINC01088-210ENST00000513153 ZNF219Q9P2Y4 722 aaPredicted RBP17.74■□□□□ 0.43
LINC01088-210ENST00000513153 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.67■□□□□ 0.42
LINC01088-210ENST00000513153 HNRNPUL2Q1KMD3 747 aaKnown RBP17.67■□□□□ 0.42
LINC01088-210ENST00000513153 SAMD1Q6SPF0 538 aaPredicted RBP17.56■□□□□ 0.4
LINC01088-210ENST00000513153 RBM42Q9BTD8 480 aaKnown RBP17.34■□□□□ 0.37
LINC01088-210ENST00000513153 MYCNP04198 464 aaPredicted RBP17.25■□□□□ 0.35
LINC01088-210ENST00000513153 POLA2Q14181 598 aa17.23■□□□□ 0.35
LINC01088-210ENST00000513153 CHRDL2Q6WN34 429 aa17.11■□□□□ 0.33
LINC01088-210ENST00000513153 ATF5Q9Y2D1 282 aaPredicted RBP16.89■□□□□ 0.29
LINC01088-210ENST00000513153 SLC4A1APQ9BWU0 796 aaKnown RBP16.87■□□□□ 0.29
LINC01088-210ENST00000513153 FOXD4L1Q9NU39 408 aa16.87■□□□□ 0.29
LINC01088-210ENST00000513153 AKT1S1Q96B36 256 aa16.85■□□□□ 0.29
LINC01088-210ENST00000513153 ZBTB12Q9Y330 459 aaPredicted RBP16.83■□□□□ 0.28
LINC01088-210ENST00000513153 REM2Q8IYK8 340 aaPredicted RBP16.7■□□□□ 0.26
LINC01088-210ENST00000513153 OSCARQ8IYS5 282 aa16.69■□□□□ 0.26
LINC01088-210ENST00000513153 SP7Q8TDD2 431 aaPredicted RBP16.68■□□□□ 0.26
LINC01088-210ENST00000513153 PIP4P2Q8N4L2 257 aa16.62■□□□□ 0.25
LINC01088-210ENST00000513153 PITPNM1O00562 1244 aa16.52■□□□□ 0.24
LINC01088-210ENST00000513153 ZBTB22O15209 634 aa16.47■□□□□ 0.23
LINC01088-210ENST00000513153 HAX1O00165 279 aa16.46■□□□□ 0.23
LINC01088-210ENST00000513153 FXR2P51116 673 aaKnown RBP eCLIP16.44■□□□□ 0.22
LINC01088-210ENST00000513153 ATXN8OSP0DMR3 200 aa16.36■□□□□ 0.21
LINC01088-210ENST00000513153 SPDYE2BA6NHP3 402 aa16.29■□□□□ 0.2
LINC01088-210ENST00000513153 SPDYE6P0CI01 402 aa16.29■□□□□ 0.2
LINC01088-210ENST00000513153 SPDYE2Q495Y8 402 aa16.29■□□□□ 0.2
LINC01088-210ENST00000513153 FBLN2P98095 1184 aa16.27■□□□□ 0.2
LINC01088-210ENST00000513153 EVX2Q03828 476 aa16.19■□□□□ 0.18
LINC01088-210ENST00000513153 CLEC11AQ9Y240 323 aa16.14■□□□□ 0.17
LINC01088-210ENST00000513153 PRKAR2AP13861 404 aaKnown RBP16.11■□□□□ 0.17
LINC01088-210ENST00000513153 SPDYE1Q8NFV5 336 aaPredicted RBP16.1■□□□□ 0.17
LINC01088-210ENST00000513153 MKRN4PQ13434 485 aaPredicted RBP16.08■□□□□ 0.16
LINC01088-210ENST00000513153 ZNF692Q9BU19 519 aaPredicted RBP16.05■□□□□ 0.16
LINC01088-210ENST00000513153 SSUH2Q9Y2M2 353 aa16■□□□□ 0.15
LINC01088-210ENST00000513153 C19orf67A6NJJ6 358 aa15.94■□□□□ 0.14
LINC01088-210ENST00000513153 CHADLQ6NUI6 762 aa15.86■□□□□ 0.13
LINC01088-210ENST00000513153 GABBR2O75899 941 aa15.82■□□□□ 0.12
LINC01088-210ENST00000513153 PRR29P0C7W0 189 aa15.8■□□□□ 0.12
LINC01088-210ENST00000513153 PABPN1Q86U42 306 aaKnown RBP eCLIP15.8■□□□□ 0.12
LINC01088-210ENST00000513153 LHX8Q68G74 356 aa15.65■□□□□ 0.1
LINC01088-210ENST00000513153 CD44P16070 742 aaKnown RBP15.58■□□□□ 0.08
LINC01088-210ENST00000513153 FARP1Q9Y4F1 1045 aaPredicted RBP15.56■□□□□ 0.08
LINC01088-210ENST00000513153 POTEIP0CG38 1075 aa15.46■□□□□ 0.07
LINC01088-210ENST00000513153 CLCN6P51797 869 aa15.41■□□□□ 0.06
LINC01088-210ENST00000513153 CSRNP3Q8WYN3 585 aa15.37■□□□□ 0.05
LINC01088-210ENST00000513153 DCBLD2Q96PD2 775 aa15.34■□□□□ 0.05
LINC01088-210ENST00000513153 ZRANB1Q9UGI0 708 aa15.3■□□□□ 0.04
LINC01088-210ENST00000513153 ZNF579Q8NAF0 562 aaKnown RBP15.28■□□□□ 0.04
LINC01088-210ENST00000513153 CREBZFQ9NS37 354 aa15.28■□□□□ 0.04
LINC01088-210ENST00000513153 STAG3Q9UJ98 1225 aa15.28■□□□□ 0.04
LINC01088-210ENST00000513153 GALR2O43603 387 aaPredicted RBP15.15■□□□□ 0.02
LINC01088-210ENST00000513153 SPDYE4A6NLX3 237 aa15.14■□□□□ 0.01
LINC01088-210ENST00000513153 PAK3O75914 559 aaPredicted RBP15.1■□□□□ 0.01
LINC01088-210ENST00000513153 EHMT2Q96KQ7 1210 aa15.09■□□□□ 0.01
LINC01088-210ENST00000513153 PHF12Q96QT6 1004 aa15.05■□□□□ -0
LINC01088-210ENST00000513153 NPM1P06748 294 aaKnown RBP eCLIP15.02■□□□□ -0
LINC01088-210ENST00000513153 PLSCR2Q9NRY7 297 aa15.01□□□□□ -0.01
LINC01088-210ENST00000513153 OTUD5Q96G74 571 aa14.97□□□□□ -0.01
LINC01088-210ENST00000513153 POTEB2H3BUK9 544 aa14.95□□□□□ -0.02
LINC01088-210ENST00000513153 MNX1P50219 401 aaPredicted RBP14.95□□□□□ -0.02
LINC01088-210ENST00000513153 PELP1Q8IZL8 1130 aaKnown RBP14.88□□□□□ -0.03
LINC01088-210ENST00000513153 MS4A3Q96HJ5 214 aa14.83□□□□□ -0.04
LINC01088-210ENST00000513153 ASTLQ6HA08 431 aaPredicted RBP14.79□□□□□ -0.04
LINC01088-210ENST00000513153 METRNQ9UJH8 293 aa14.78□□□□□ -0.04
LINC01088-210ENST00000513153 ATMINO43313 823 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms