Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 TOX4-212ENST00000613569 4711 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.925e-10■■■■■ 27.5
NCBP2P52298 TUBA1C-206ENST00000549818 536 ntTSL 48.9□□□□□ -0.986e-6■■■■■ 27.5
NCBP2P52298 TUBA1C-210ENST00000639419 1075 ntTSL 5 BASIC8.82□□□□□ -16e-6■■■■■ 27.5
NCBP2P52298 TUBA1C-204ENST00000549183 696 ntTSL 2 BASIC8.26□□□□□ -1.096e-6■■■■■ 27.5
NCBP2P52298 REPIN1-212ENST00000487455 464 ntTSL 48.21□□□□□ -1.16e-6■■■■■ 27.5
NCBP2P52298 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.316e-6■■■■■ 27.5
NCBP2P52298 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.376e-6■■■■■ 27.5
NCBP2P52298 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.416e-6■■■■■ 27.5
NCBP2P52298 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.23□□□□□ -1.416e-6■■■■■ 27.5
NCBP2P52298 CCAR1-205ENST00000483264 487 ntTSL 55.52□□□□□ -1.536e-6■■■■■ 27.5
NCBP2P52298 TBL1XR1-224ENST00000635794 768 ntTSL 53.27□□□□□ -1.894e-11■■■■■ 27.5
NCBP2P52298 CCAR1-203ENST00000479143 478 ntTSL 53.19□□□□□ -1.96e-6■■■■■ 27.5
NCBP2P52298 TBL1XR1-221ENST00000630833 567 ntTSL 42.75□□□□□ -1.974e-11■■■■■ 27.5
NCBP2P52298 TBL1XR1-232ENST00000637544 214 ntTSL 52.03□□□□□ -2.084e-11■■■■■ 27.5
NCBP2P52298 CAP2-205ENST00000479291 1378 ntTSL 1 (best)9.38□□□□□ -0.915e-8■■■■■ 27.5
NCBP2P52298 CAP2-203ENST00000465994 1404 ntTSL 2 BASIC7.7□□□□□ -1.185e-8■■■■■ 27.5
NCBP2P52298 SCML1-201ENST00000380041 1997 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.446e-13■■■■■ 27.5
NCBP2P52298 SCML1-204ENST00000398080 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.556e-13■■■■■ 27.5
NCBP2P52298 SCML1-202ENST00000380043 2830 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.86e-13■■■■■ 27.5
NCBP2P52298 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.256e-13■■■■■ 27.5
NCBP2P52298 VAMP1-205ENST00000535927 578 ntTSL 415.2■□□□□ 0.027e-8■■■■■ 27.5
NCBP2P52298 VAMP1-207ENST00000539047 565 ntTSL 414.54□□□□□ -0.087e-8■■■■■ 27.5
NCBP2P52298 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.087e-8■■■■■ 27.5
NCBP2P52298 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13□□□□□ -0.337e-8■■■■■ 27.5
NCBP2P52298 VAMP1-208ENST00000544432 759 ntTSL 312.74□□□□□ -0.377e-8■■■■■ 27.5
NCBP2P52298 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC11.82□□□□□ -0.527e-8■■■■■ 27.5
NCBP2P52298 VAMP1-204ENST00000535180 747 ntTSL 3 BASIC9.11□□□□□ -0.957e-8■■■■■ 27.5
NCBP2P52298 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.02■■□□□ 1.129e-9■■■■■ 27.5
NCBP2P52298 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.079e-9■■■■■ 27.5
NCBP2P52298 GADD45A-203ENST00000460575 874 ntTSL 220.7■□□□□ 0.99e-9■■■■■ 27.5
NCBP2P52298 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.51■□□□□ 0.719e-9■■■■■ 27.5
NCBP2P52298 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.37■□□□□ 0.371e-6■■■■■ 27.4
NCBP2P52298 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.39■□□□□ 0.051e-6■■■■■ 27.4
NCBP2P52298 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.78□□□□□ -0.041e-6■■■■■ 27.4
NCBP2P52298 PPHLN1-214ENST00000549774 847 ntTSL 514.54□□□□□ -0.081e-6■■■■■ 27.4
NCBP2P52298 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.081e-6■■■■■ 27.4
NCBP2P52298 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.291e-6■■■■■ 27.4
NCBP2P52298 PPHLN1-219ENST00000552202 1290 ntTSL 1 (best)12.88□□□□□ -0.351e-6■■■■■ 27.4
NCBP2P52298 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC12.64□□□□□ -0.391e-6■■■■■ 27.4
NCBP2P52298 PPHLN1-215ENST00000550535 770 ntTSL 312.07□□□□□ -0.481e-6■■■■■ 27.4
NCBP2P52298 PPHLN1-218ENST00000551723 415 ntTSL 512.03□□□□□ -0.481e-6■■■■■ 27.4
NCBP2P52298 PPHLN1-220ENST00000552429 560 ntTSL 211.83□□□□□ -0.521e-6■■■■■ 27.4
NCBP2P52298 PPHLN1-216ENST00000551406 648 ntTSL 211.56□□□□□ -0.561e-6■■■■■ 27.4
NCBP2P52298 PPHLN1-205ENST00000395568 2170 ntTSL 1 (best) BASIC10.99□□□□□ -0.651e-6■■■■■ 27.4
NCBP2P52298 PPHLN1-224ENST00000613154 1863 ntAPPRIS ALT1 TSL 5 BASIC9.66□□□□□ -0.861e-6■■■■■ 27.4
NCBP2P52298 PPHLN1-203ENST00000337898 1465 ntTSL 2 BASIC9.21□□□□□ -0.931e-6■■■■■ 27.4
NCBP2P52298 PPHLN1-202ENST00000317560 1359 ntTSL 2 BASIC7.24□□□□□ -1.251e-6■■■■■ 27.4
NCBP2P52298 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC6.46□□□□□ -1.371e-6■■■■■ 27.4
NCBP2P52298 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC5.49□□□□□ -1.531e-6■■■■■ 27.4
NCBP2P52298 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.011e-6■■■■■ 27.4
NCBP2P52298 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.933e-6■■■■■ 27.4
NCBP2P52298 TPST2-205ENST00000442495 586 ntTSL 219.59■□□□□ 0.733e-6■■■■■ 27.4
NCBP2P52298 TPST2-207ENST00000450022 544 ntTSL 318.29■□□□□ 0.523e-6■■■■■ 27.4
NCBP2P52298 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.333e-6■■■■■ 27.4
NCBP2P52298 TPST2-204ENST00000440953 544 ntTSL 516.82■□□□□ 0.283e-6■■■■■ 27.4
NCBP2P52298 DANCR-203ENST00000441504 336 ntTSL 216.11■□□□□ 0.173e-7■■■■■ 27.4
NCBP2P52298 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.48■□□□□ 0.073e-7■■■■■ 27.4
NCBP2P52298 CDHR3-212ENST00000487084 834 ntTSL 320.61■□□□□ 0.894e-15■■■■■ 27.4
NCBP2P52298 CDHR3-210ENST00000474330 1603 ntTSL 519.16■□□□□ 0.664e-15■■■■■ 27.4
NCBP2P52298 CDHR3-207ENST00000470188 2199 ntTSL 218.97■□□□□ 0.634e-15■■■■■ 27.4
NCBP2P52298 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.64□□□□□ -0.398e-8■■■■■ 27.4
NCBP2P52298 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.08■□□□□ 0.973e-10■■■■■ 27.3
NCBP2P52298 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.93e-10■■■■■ 27.3
NCBP2P52298 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.11■□□□□ 0.493e-6■■■■■ 27.3
NCBP2P52298 JPT2-213ENST00000569256 911 ntTSL 1 (best)16.49■□□□□ 0.233e-6■■■■■ 27.3
NCBP2P52298 JPT2-211ENST00000567717 857 ntTSL 315.68■□□□□ 0.13e-6■■■■■ 27.3
NCBP2P52298 JPT2-209ENST00000566742 593 ntTSL 414.92□□□□□ -0.023e-6■■■■■ 27.3
NCBP2P52298 JPT2-214ENST00000569765 782 ntTSL 2 BASIC13.27□□□□□ -0.293e-6■■■■■ 27.3
NCBP2P52298 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.443e-6■■■■■ 27.3
NCBP2P52298 JPT2-206ENST00000562684 3185 ntTSL 2 BASIC11.82□□□□□ -0.523e-6■■■■■ 27.3
NCBP2P52298 C22orf39-204ENST00000509549 2979 ntTSL 211.46□□□□□ -0.573e-10■■■■■ 27.3
NCBP2P52298 JPT2-201ENST00000248098 3718 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.583e-6■■■■■ 27.3
NCBP2P52298 JPT2-203ENST00000382711 894 ntTSL 4 BASIC10.64□□□□□ -0.713e-6■■■■■ 27.3
NCBP2P52298 HIRA-203ENST00000452818 453 ntTSL 510.06□□□□□ -0.83e-10■■■■■ 27.3
NCBP2P52298 JPT2-210ENST00000566925 570 ntTSL 48.09□□□□□ -1.113e-6■■■■■ 27.3
NCBP2P52298 RPL13A-208ENST00000477613 796 ntTSL 516.08■□□□□ 0.163e-45■■■■■ 27.3
NCBP2P52298 RPL13A-209ENST00000479992 850 ntTSL 314.8□□□□□ -0.043e-45■■■■■ 27.3
NCBP2P52298 RPL13A-211ENST00000486930 652 ntTSL 314.16□□□□□ -0.143e-45■■■■■ 27.3
NCBP2P52298 RPL13A-204ENST00000472481 728 ntTSL 214.12□□□□□ -0.153e-45■■■■■ 27.3
NCBP2P52298 RPL13A-214ENST00000624069 1122 ntTSL 1 (best)13.92□□□□□ -0.183e-45■■■■■ 27.3
NCBP2P52298 RPL13A-202ENST00000467825 660 ntTSL 513.71□□□□□ -0.213e-45■■■■■ 27.3
NCBP2P52298 RPL13A-212ENST00000488946 2312 ntTSL 213.31□□□□□ -0.283e-45■■■■■ 27.3
NCBP2P52298 RPL13A-210ENST00000484279 794 ntTSL 512.65□□□□□ -0.383e-45■■■■■ 27.3
NCBP2P52298 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC12.65□□□□□ -0.383e-45■■■■■ 27.3
NCBP2P52298 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.43e-45■■■■■ 27.3
NCBP2P52298 ELL2-206ENST00000513343 582 ntTSL 318.14■□□□□ 0.491e-9■■■■■ 27.3
NCBP2P52298 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.351e-9■■■■■ 27.3
NCBP2P52298 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.943e-12■■■■■ 27.2
NCBP2P52298 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.322e-14■■■■■ 27.1
NCBP2P52298 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.012e-14■■■■■ 27.1
NCBP2P52298 ZFP90-206ENST00000566573 545 ntTSL 424.41■■□□□ 1.52e-7■■■■■ 27.1
NCBP2P52298 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.41■■□□□ 1.52e-7■■■■■ 27.1
NCBP2P52298 ZFP90-216ENST00000573685 543 ntTSL 424.41■■□□□ 1.52e-7■■■■■ 27.1
NCBP2P52298 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.41■■□□□ 1.52e-7■■■■■ 27.1
NCBP2P52298 ZFP90-207ENST00000569109 538 ntTSL 418.42■□□□□ 0.542e-7■■■■■ 27.1
NCBP2P52298 ZFP90-218ENST00000576805 648 ntTSL 317.1■□□□□ 0.332e-7■■■■■ 27.1
NCBP2P52298 ZFP90-202ENST00000562156 485 ntTSL 415.98■□□□□ 0.152e-7■■■■■ 27.1
NCBP2P52298 ZFP90-211ENST00000571382 717 ntTSL 515.74■□□□□ 0.112e-7■■■■■ 27.1
NCBP2P52298 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.042e-7■■■■■ 27.1
NCBP2P52298 ZFP90-213ENST00000571809 650 ntTSL 414.99□□□□□ -0.012e-7■■■■■ 27.1
Retrieved 100 of 18,329 protein–RNA pairs in 380.3 ms