RNA–Protein interactions for RNA: ENST00000398080.5

SCML1-204, Transcript of Scm polycomb group protein like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCML1, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML1-204ENST00000398080 NISCHQ9Y2I1 1504 aa24.61■■□□□ 1.53
SCML1-204ENST00000398080 SHROOM4Q9ULL8 1493 aa21.97■■□□□ 1.11
SCML1-204ENST00000398080 SUPT5HO00267 1087 aaKnown RBP21.62■■□□□ 1.05
SCML1-204ENST00000398080 DCAF8L2P0C7V8 631 aa21.12■□□□□ 0.97
SCML1-204ENST00000398080 MYO15BQ96JP2 1530 aa21.02■□□□□ 0.96
SCML1-204ENST00000398080 CHIC1Q5VXU3 224 aa20.87■□□□□ 0.93
SCML1-204ENST00000398080 ZCCHC6Q5VYS8 1495 aaKnown RBP20.82■□□□□ 0.92
SCML1-204ENST00000398080 PCGF6Q9BYE7 350 aa20.77■□□□□ 0.92
SCML1-204ENST00000398080 PPARGC1BQ86YN6 1023 aaKnown RBP20.72■□□□□ 0.91
SCML1-204ENST00000398080 HRCP23327 699 aa20.67■□□□□ 0.9
SCML1-204ENST00000398080 LOC105371045A0A1W2PR82 267 aa20.62■□□□□ 0.89
SCML1-204ENST00000398080 CCDC180Q9P1Z9 1646 aa20.42■□□□□ 0.86
SCML1-204ENST00000398080 EHMT2Q96KQ7 1210 aa20.26■□□□□ 0.83
SCML1-204ENST00000398080 FAM9AQ8IZU1 332 aaPredicted RBP20.1■□□□□ 0.81
SCML1-204ENST00000398080 DCAF1Q9Y4B6 1507 aa19.97■□□□□ 0.79
SCML1-204ENST00000398080 TRIM26Q12899 539 aaPredicted RBP19.91■□□□□ 0.78
SCML1-204ENST00000398080 TRIM41Q8WV44 630 aa19.82■□□□□ 0.76
SCML1-204ENST00000398080 SCRIBQ14160 1630 aa19.81■□□□□ 0.76
SCML1-204ENST00000398080 RSF1Q96T23 1441 aaPredicted RBP19.75■□□□□ 0.75
SCML1-204ENST00000398080 RB1CC1Q8TDY2 1594 aa19.68■□□□□ 0.74
SCML1-204ENST00000398080 ABCC9O60706 1549 aa19.68■□□□□ 0.74
SCML1-204ENST00000398080 TTBK1Q5TCY1 1321 aaPredicted RBP19.59■□□□□ 0.73
SCML1-204ENST00000398080 CECR2Q9BXF3 1484 aa19.53■□□□□ 0.72
SCML1-204ENST00000398080 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.47■□□□□ 0.71
SCML1-204ENST00000398080 SCAF1Q9H7N4 1312 aaKnown RBP19.46■□□□□ 0.71
SCML1-204ENST00000398080 MROH2BQ7Z745 1585 aa19.37■□□□□ 0.69
SCML1-204ENST00000398080 ZEB1P37275 1124 aaPredicted RBP19.31■□□□□ 0.68
SCML1-204ENST00000398080 WIZO95785 1651 aa19.3■□□□□ 0.68
SCML1-204ENST00000398080 CCER1Q8TC90 406 aaPredicted RBP19.23■□□□□ 0.67
SCML1-204ENST00000398080 NEUROD1Q13562 356 aa19.13■□□□□ 0.65
SCML1-204ENST00000398080 ABCC8Q09428 1581 aa19.12■□□□□ 0.65
SCML1-204ENST00000398080 CCDC88BA6NC98 1476 aa19.05■□□□□ 0.64
SCML1-204ENST00000398080 SOGA1O94964 1423 aa19■□□□□ 0.63
SCML1-204ENST00000398080 RUSC2Q8N2Y8 1516 aa18.98■□□□□ 0.63
SCML1-204ENST00000398080 DIEXFQ68CQ4 756 aaKnown RBP18.97■□□□□ 0.63
SCML1-204ENST00000398080 ACIN1Q9UKV3 1341 aaKnown RBP18.95■□□□□ 0.62
SCML1-204ENST00000398080 RANGAP1P46060 587 aaPredicted RBP18.94■□□□□ 0.62
SCML1-204ENST00000398080 GTF3C3Q9Y5Q9 886 aa18.93■□□□□ 0.62
SCML1-204ENST00000398080 UBTFP17480 764 aaKnown RBP18.93■□□□□ 0.62
SCML1-204ENST00000398080 NACADO15069 1562 aa18.91■□□□□ 0.62
SCML1-204ENST00000398080 YTHDC1Q96MU7 727 aaKnown RBP18.9■□□□□ 0.62
SCML1-204ENST00000398080 EIF4G1Q04637 1599 aaKnown RBP18.9■□□□□ 0.62
SCML1-204ENST00000398080 BAZ1AQ9NRL2 1556 aaPredicted RBP18.89■□□□□ 0.61
SCML1-204ENST00000398080 CEP162Q5TB80 1403 aa18.88■□□□□ 0.61
SCML1-204ENST00000398080 PABPN1Q86U42 306 aaKnown RBP eCLIP18.87■□□□□ 0.61
SCML1-204ENST00000398080 HNRNPUL2Q1KMD3 747 aaKnown RBP18.85■□□□□ 0.61
SCML1-204ENST00000398080 CSRNP3Q8WYN3 585 aa18.76■□□□□ 0.59
SCML1-204ENST00000398080 SMARCA2P51531 1590 aa18.73■□□□□ 0.59
SCML1-204ENST00000398080 TOP2AP11388 1531 aaKnown RBP18.69■□□□□ 0.58
SCML1-204ENST00000398080 PELP1Q8IZL8 1130 aaKnown RBP18.69■□□□□ 0.58
SCML1-204ENST00000398080 SMARCA4P51532 1647 aa18.68■□□□□ 0.58
SCML1-204ENST00000398080 MIER1Q8N108 512 aa18.66■□□□□ 0.58
SCML1-204ENST00000398080 TNIKQ9UKE5 1360 aa18.65■□□□□ 0.58
SCML1-204ENST00000398080 WRNQ14191 1432 aaPredicted RBP eCLIP18.65■□□□□ 0.58
SCML1-204ENST00000398080 ZNF316A6NFI3 1004 aaPredicted RBP18.64■□□□□ 0.57
SCML1-204ENST00000398080 CENPBP07199 599 aaPredicted RBP18.61■□□□□ 0.57
SCML1-204ENST00000398080 UNC13AQ9UPW8 1703 aa18.59■□□□□ 0.57
SCML1-204ENST00000398080 GOLGA3Q08378 1498 aa18.49■□□□□ 0.55
SCML1-204ENST00000398080 SYNJ1O43426 1573 aa18.48■□□□□ 0.55
SCML1-204ENST00000398080 CLIP1P30622 1438 aa18.44■□□□□ 0.54
SCML1-204ENST00000398080 RAPGEF2Q9Y4G8 1499 aa18.43■□□□□ 0.54
SCML1-204ENST00000398080 APLP2Q06481 763 aa18.36■□□□□ 0.53
SCML1-204ENST00000398080 KANK4Q5T7N3 995 aaPredicted RBP18.36■□□□□ 0.53
SCML1-204ENST00000398080 ITGAEP38570 1179 aa18.34■□□□□ 0.53
SCML1-204ENST00000398080 EEA1Q15075 1411 aa18.34■□□□□ 0.53
SCML1-204ENST00000398080 BICRAQ9NZM4 1560 aa18.34■□□□□ 0.53
SCML1-204ENST00000398080 CEP164Q9UPV0 1460 aa18.31■□□□□ 0.52
SCML1-204ENST00000398080 VPS8Q8N3P4 1428 aa18.29■□□□□ 0.52
SCML1-204ENST00000398080 KIF21BO75037 1637 aa18.25■□□□□ 0.51
SCML1-204ENST00000398080 KCNH8Q96L42 1107 aa18.24■□□□□ 0.51
SCML1-204ENST00000398080 ATAD2BQ9ULI0 1458 aa18.2■□□□□ 0.5
SCML1-204ENST00000398080 DHX57Q6P158 1386 aaKnown RBP18.17■□□□□ 0.5
SCML1-204ENST00000398080 BAZ1BQ9UIG0 1483 aaKnown RBP18.17■□□□□ 0.5
SCML1-204ENST00000398080 ARAP1Q96P48 1450 aa18.1■□□□□ 0.49
SCML1-204ENST00000398080 HIRIP3Q9BW71 556 aaPredicted RBP18.08■□□□□ 0.49
SCML1-204ENST00000398080 SUPT16HQ9Y5B9 1047 aaKnown RBP18.06■□□□□ 0.48
SCML1-204ENST00000398080 PEG3Q9GZU2 1588 aa18.05■□□□□ 0.48
SCML1-204ENST00000398080 BCANQ96GW7 911 aa18.04■□□□□ 0.48
SCML1-204ENST00000398080 P3H3Q8IVL6 736 aa18.02■□□□□ 0.48
SCML1-204ENST00000398080 TOP2BQ02880 1626 aa18■□□□□ 0.47
SCML1-204ENST00000398080 SIN3AQ96ST3 1273 aa18■□□□□ 0.47
SCML1-204ENST00000398080 ATP1B4Q9UN42 357 aaPredicted RBP17.98■□□□□ 0.47
SCML1-204ENST00000398080 PRXQ9BXM0 1461 aa17.97■□□□□ 0.47
SCML1-204ENST00000398080 CUX1P39880 1505 aa17.95■□□□□ 0.46
SCML1-204ENST00000398080 DDX10Q13206 875 aaKnown RBP17.92■□□□□ 0.46
SCML1-204ENST00000398080 ARHGAP35Q9NRY4 1499 aa17.9■□□□□ 0.46
SCML1-204ENST00000398080 FAM50AQ14320 339 aaKnown RBP17.9■□□□□ 0.46
SCML1-204ENST00000398080 CCNB3Q8WWL7 1395 aa17.9■□□□□ 0.46
SCML1-204ENST00000398080 RAB3GAP2Q9H2M9 1393 aa17.89■□□□□ 0.45
SCML1-204ENST00000398080 TSHZ2Q9NRE2 1034 aa17.86■□□□□ 0.45
SCML1-204ENST00000398080 RRBP1Q9P2E9 1410 aaKnown RBP17.85■□□□□ 0.45
SCML1-204ENST00000398080 BIVM-ERCC5R4GMW8 1640 aa17.85■□□□□ 0.45
SCML1-204ENST00000398080 KIF27Q86VH2 1401 aa17.82■□□□□ 0.44
SCML1-204ENST00000398080 TRIM52Q96A61 297 aa17.8■□□□□ 0.44
SCML1-204ENST00000398080 MAPKBP1O60336 1514 aa17.8■□□□□ 0.44
SCML1-204ENST00000398080 ERICH3Q5RHP9 1530 aa17.8■□□□□ 0.44
SCML1-204ENST00000398080 PHLDB1Q86UU1 1377 aa17.79■□□□□ 0.44
SCML1-204ENST00000398080 CLSPNQ9HAW4 1339 aa17.79■□□□□ 0.44
SCML1-204ENST00000398080 WDR97A6NE52 1622 aa17.77■□□□□ 0.44
SCML1-204ENST00000398080 FKBP8Q14318 412 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms