RNA–Protein interactions for RNA: ENST00000552202.5

PPHLN1-219, Transcript of periphilin 1, humanhuman

TSL 1 (best)

Gene PPHLN1, Length 1,290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPHLN1-219ENST00000552202 NISCHQ9Y2I1 1504 aa36.38■■■■□ 3.41
PPHLN1-219ENST00000552202 ABCC9O60706 1549 aa33.02■■■□□ 2.88
PPHLN1-219ENST00000552202 CCDC180Q9P1Z9 1646 aa32.73■■■□□ 2.83
PPHLN1-219ENST00000552202 RB1CC1Q8TDY2 1594 aa31.26■■■□□ 2.6
PPHLN1-219ENST00000552202 DNAJC5BQ9UF47 199 aa31.13■■■□□ 2.57
PPHLN1-219ENST00000552202 NACADO15069 1562 aa30.96■■■□□ 2.55
PPHLN1-219ENST00000552202 DCAF8L2P0C7V8 631 aa30.9■■■□□ 2.54
PPHLN1-219ENST00000552202 PABPN1Q86U42 306 aaKnown RBP eCLIP30.72■■■□□ 2.51
PPHLN1-219ENST00000552202 UNC13AQ9UPW8 1703 aa30.64■■■□□ 2.5
PPHLN1-219ENST00000552202 AEBP2Q6ZN18 517 aaPredicted RBP30.4■■■□□ 2.46
PPHLN1-219ENST00000552202 MYO15BQ96JP2 1530 aa30.39■■■□□ 2.46
PPHLN1-219ENST00000552202 BICRAQ9NZM4 1560 aa30.39■■■□□ 2.46
PPHLN1-219ENST00000552202 ZCCHC6Q5VYS8 1495 aaKnown RBP30.11■■■□□ 2.41
PPHLN1-219ENST00000552202 DCAF1Q9Y4B6 1507 aa29.96■■■□□ 2.39
PPHLN1-219ENST00000552202 SCRIBQ14160 1630 aa29.92■■■□□ 2.38
PPHLN1-219ENST00000552202 SHROOM4Q9ULL8 1493 aa29.82■■■□□ 2.36
PPHLN1-219ENST00000552202 CC2D2AQ9P2K1 1620 aa29.79■■■□□ 2.36
PPHLN1-219ENST00000552202 CHIC1Q5VXU3 224 aa29.79■■■□□ 2.36
PPHLN1-219ENST00000552202 CECR2Q9BXF3 1484 aa29.72■■■□□ 2.35
PPHLN1-219ENST00000552202 EIF4G1Q04637 1599 aaKnown RBP29.66■■■□□ 2.34
PPHLN1-219ENST00000552202 DNAJC5Q9H3Z4 198 aa28.66■■■□□ 2.18
PPHLN1-219ENST00000552202 NCAPD3P42695 1498 aa28.57■■■□□ 2.16
PPHLN1-219ENST00000552202 ATAD2BQ9ULI0 1458 aa28.51■■■□□ 2.15
PPHLN1-219ENST00000552202 ERCC6Q03468 1493 aa28.5■■■□□ 2.15
PPHLN1-219ENST00000552202 SMARCA4P51532 1647 aa28.46■■■□□ 2.15
PPHLN1-219ENST00000552202 CUX2O14529 1486 aa28.44■■■□□ 2.14
PPHLN1-219ENST00000552202 SMARCA2P51531 1590 aa28.39■■■□□ 2.14
PPHLN1-219ENST00000552202 HMGXB3Q12766 1538 aa28.36■■■□□ 2.13
PPHLN1-219ENST00000552202 NESP48681 1621 aa28.32■■■□□ 2.12
PPHLN1-219ENST00000552202 BAZ1AQ9NRL2 1556 aaPredicted RBP28.25■■■□□ 2.11
PPHLN1-219ENST00000552202 BAZ1BQ9UIG0 1483 aaKnown RBP28.23■■■□□ 2.11
PPHLN1-219ENST00000552202 PEG3Q9GZU2 1588 aa28.11■■■□□ 2.09
PPHLN1-219ENST00000552202 MROH2BQ7Z745 1585 aa28.08■■■□□ 2.09
PPHLN1-219ENST00000552202 THOC2Q8NI27 1593 aaKnown RBP28.04■■■□□ 2.08
PPHLN1-219ENST00000552202 LAMC3Q9Y6N6 1575 aa27.99■■■□□ 2.07
PPHLN1-219ENST00000552202 KIF21AQ7Z4S6 1674 aa27.95■■■□□ 2.07
PPHLN1-219ENST00000552202 PDS5BQ9NTI5 1447 aa27.83■■■□□ 2.05
PPHLN1-219ENST00000552202 WIZO95785 1651 aa27.77■■■□□ 2.04
PPHLN1-219ENST00000552202 CADPSQ9ULU8 1353 aa27.72■■■□□ 2.03
PPHLN1-219ENST00000552202 MRC2Q9UBG0 1479 aa27.64■■■□□ 2.01
PPHLN1-219ENST00000552202 WDR62O43379 1518 aa27.57■■■□□ 2
PPHLN1-219ENST00000552202 CEP164Q9UPV0 1460 aa27.5■■□□□ 1.99
PPHLN1-219ENST00000552202 TRIM41Q8WV44 630 aa27.45■■□□□ 1.98
PPHLN1-219ENST00000552202 FANCD2Q9BXW9 1451 aa27.44■■□□□ 1.98
PPHLN1-219ENST00000552202 RSF1Q96T23 1441 aaPredicted RBP27.38■■□□□ 1.97
PPHLN1-219ENST00000552202 CFTRP13569 1480 aa27.36■■□□□ 1.97
PPHLN1-219ENST00000552202 TOP2AP11388 1531 aaKnown RBP27.34■■□□□ 1.97
PPHLN1-219ENST00000552202 URB2Q14146 1524 aaKnown RBP27.26■■□□□ 1.95
PPHLN1-219ENST00000552202 PRDM2Q13029 1718 aa27.13■■□□□ 1.93
PPHLN1-219ENST00000552202 OSCARQ8IYS5 282 aa27.11■■□□□ 1.93
PPHLN1-219ENST00000552202 CCDC88BA6NC98 1476 aa27.04■■□□□ 1.92
PPHLN1-219ENST00000552202 ZNF608Q9ULD9 1512 aaPredicted RBP26.97■■□□□ 1.91
PPHLN1-219ENST00000552202 IFT140Q96RY7 1462 aa26.93■■□□□ 1.9
PPHLN1-219ENST00000552202 TOPBP1Q92547 1522 aa26.9■■□□□ 1.9
PPHLN1-219ENST00000552202 RIMBP3CA6NJZ7 1639 aa26.87■■□□□ 1.89
PPHLN1-219ENST00000552202 RIMBP3BA6NNM3 1639 aa26.87■■□□□ 1.89
PPHLN1-219ENST00000552202 RIMBP3Q9UFD9 1639 aa26.87■■□□□ 1.89
PPHLN1-219ENST00000552202 EIF4G3O43432 1585 aaKnown RBP26.81■■□□□ 1.88
PPHLN1-219ENST00000552202 DNMBPQ6XZF7 1577 aa26.79■■□□□ 1.88
PPHLN1-219ENST00000552202 ABCC8Q09428 1581 aa26.75■■□□□ 1.87
PPHLN1-219ENST00000552202 ARHGEF11O15085 1522 aa26.74■■□□□ 1.87
PPHLN1-219ENST00000552202 TARBP1Q13395 1621 aaKnown RBP26.68■■□□□ 1.86
PPHLN1-219ENST00000552202 AQRO60306 1485 aaKnown RBP eCLIP26.68■■□□□ 1.86
PPHLN1-219ENST00000552202 CHD1O14646 1710 aa26.68■■□□□ 1.86
PPHLN1-219ENST00000552202 POLA1P09884 1462 aaPredicted RBP26.62■■□□□ 1.85
PPHLN1-219ENST00000552202 FBLN2P98095 1184 aa26.59■■□□□ 1.85
PPHLN1-219ENST00000552202 RAD54L2Q9Y4B4 1467 aa26.57■■□□□ 1.84
PPHLN1-219ENST00000552202 CYB5RLQ6IPT4 315 aa26.56■■□□□ 1.84
PPHLN1-219ENST00000552202 TDRD9Q8NDG6 1382 aaKnown RBP26.49■■□□□ 1.83
PPHLN1-219ENST00000552202 SOGA1O94964 1423 aa26.48■■□□□ 1.83
PPHLN1-219ENST00000552202 ARAP1Q96P48 1450 aa26.47■■□□□ 1.83
PPHLN1-219ENST00000552202 FGD5Q6ZNL6 1462 aa26.45■■□□□ 1.82
PPHLN1-219ENST00000552202 SNAPC4Q5SXM2 1469 aa26.42■■□□□ 1.82
PPHLN1-219ENST00000552202 CUX1P39880 1505 aa26.39■■□□□ 1.81
PPHLN1-219ENST00000552202 TRHP20396 242 aaPredicted RBP26.35■■□□□ 1.81
PPHLN1-219ENST00000552202 WDR97A6NE52 1622 aa26.32■■□□□ 1.8
PPHLN1-219ENST00000552202 CLASP1Q7Z460 1538 aa26.3■■□□□ 1.8
PPHLN1-219ENST00000552202 CHMP7Q8WUX9 453 aaPredicted RBP26.29■■□□□ 1.8
PPHLN1-219ENST00000552202 PHF23Q9BUL5 403 aaPredicted RBP26.29■■□□□ 1.8
PPHLN1-219ENST00000552202 MAGI1Q96QZ7 1491 aaPredicted RBP26.27■■□□□ 1.8
PPHLN1-219ENST00000552202 SYNJ1O43426 1573 aa26.27■■□□□ 1.8
PPHLN1-219ENST00000552202 GRIN2BQ13224 1484 aa26.26■■□□□ 1.79
PPHLN1-219ENST00000552202 PBRM1Q86U86 1689 aa26.23■■□□□ 1.79
PPHLN1-219ENST00000552202 SYNJ2O15056 1496 aa26.2■■□□□ 1.78
PPHLN1-219ENST00000552202 GAPVD1Q14C86 1478 aa26.16■■□□□ 1.78
PPHLN1-219ENST00000552202 SUPT5HO00267 1087 aaKnown RBP26.11■■□□□ 1.77
PPHLN1-219ENST00000552202 ABCA5Q8WWZ7 1642 aa26.1■■□□□ 1.77
PPHLN1-219ENST00000552202 ABCA10Q8WWZ4 1543 aa26.08■■□□□ 1.77
PPHLN1-219ENST00000552202 ERCC6L2Q5T890 1561 aa25.95■■□□□ 1.75
PPHLN1-219ENST00000552202 GRIN2AQ12879 1464 aa25.94■■□□□ 1.74
PPHLN1-219ENST00000552202 ADAMTS12P58397 1594 aa25.94■■□□□ 1.74
PPHLN1-219ENST00000552202 WRNQ14191 1432 aaPredicted RBP eCLIP25.92■■□□□ 1.74
PPHLN1-219ENST00000552202 CEP170Q5SW79 1584 aa25.9■■□□□ 1.74
PPHLN1-219ENST00000552202 BIVM-ERCC5R4GMW8 1640 aa25.9■■□□□ 1.74
PPHLN1-219ENST00000552202 TOP2BQ02880 1626 aa25.88■■□□□ 1.73
PPHLN1-219ENST00000552202 NUP160Q12769 1436 aa25.84■■□□□ 1.73
PPHLN1-219ENST00000552202 FHAD1B1AJZ9 1412 aa25.8■■□□□ 1.72
PPHLN1-219ENST00000552202 SHROOM2Q13796 1616 aa25.77■■□□□ 1.72
PPHLN1-219ENST00000552202 ERICH3Q5RHP9 1530 aa25.74■■□□□ 1.71
PPHLN1-219ENST00000552202 PRG4Q92954 1404 aaPredicted RBP25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms