RNA–Protein interactions for RNA: ENST00000380043.7

SCML1-202, Transcript of Scm polycomb group protein like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCML1, Length 2,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML1-202ENST00000380043 NISCHQ9Y2I1 1504 aa23.01■■□□□ 1.27
SCML1-202ENST00000380043 CCDC180Q9P1Z9 1646 aa19.63■□□□□ 0.73
SCML1-202ENST00000380043 DCAF8L2P0C7V8 631 aa19.59■□□□□ 0.73
SCML1-202ENST00000380043 SHROOM4Q9ULL8 1493 aa19.58■□□□□ 0.73
SCML1-202ENST00000380043 ZCCHC6Q5VYS8 1495 aaKnown RBP19.34■□□□□ 0.69
SCML1-202ENST00000380043 SUPT5HO00267 1087 aaKnown RBP18.98■□□□□ 0.63
SCML1-202ENST00000380043 ABCC9O60706 1549 aa18.92■□□□□ 0.62
SCML1-202ENST00000380043 DCAF1Q9Y4B6 1507 aa18.73■□□□□ 0.59
SCML1-202ENST00000380043 SCRIBQ14160 1630 aa18.56■□□□□ 0.56
SCML1-202ENST00000380043 MYO15BQ96JP2 1530 aa18.33■□□□□ 0.53
SCML1-202ENST00000380043 NACADO15069 1562 aa18.33■□□□□ 0.52
SCML1-202ENST00000380043 RB1CC1Q8TDY2 1594 aa18.17■□□□□ 0.5
SCML1-202ENST00000380043 CECR2Q9BXF3 1484 aa18.1■□□□□ 0.49
SCML1-202ENST00000380043 RSF1Q96T23 1441 aaPredicted RBP18.09■□□□□ 0.49
SCML1-202ENST00000380043 PABPN1Q86U42 306 aaKnown RBP eCLIP18.08■□□□□ 0.49
SCML1-202ENST00000380043 CHIC1Q5VXU3 224 aa18.08■□□□□ 0.48
SCML1-202ENST00000380043 MROH2BQ7Z745 1585 aa17.94■□□□□ 0.46
SCML1-202ENST00000380043 UNC13AQ9UPW8 1703 aa17.88■□□□□ 0.45
SCML1-202ENST00000380043 WIZO95785 1651 aa17.81■□□□□ 0.44
SCML1-202ENST00000380043 BICRAQ9NZM4 1560 aa17.72■□□□□ 0.43
SCML1-202ENST00000380043 BAZ1AQ9NRL2 1556 aaPredicted RBP17.69■□□□□ 0.42
SCML1-202ENST00000380043 LOC105371045A0A1W2PR82 267 aa17.65■□□□□ 0.42
SCML1-202ENST00000380043 TRIM41Q8WV44 630 aa17.62■□□□□ 0.41
SCML1-202ENST00000380043 FAM9AQ8IZU1 332 aaPredicted RBP17.61■□□□□ 0.41
SCML1-202ENST00000380043 SMARCA4P51532 1647 aa17.61■□□□□ 0.41
SCML1-202ENST00000380043 EHMT2Q96KQ7 1210 aa17.6■□□□□ 0.41
SCML1-202ENST00000380043 CCDC88BA6NC98 1476 aa17.43■□□□□ 0.38
SCML1-202ENST00000380043 TOP2AP11388 1531 aaKnown RBP17.43■□□□□ 0.38
SCML1-202ENST00000380043 SMARCA2P51531 1590 aa17.35■□□□□ 0.37
SCML1-202ENST00000380043 ATAD2BQ9ULI0 1458 aa17.32■□□□□ 0.36
SCML1-202ENST00000380043 ABCC8Q09428 1581 aa17.31■□□□□ 0.36
SCML1-202ENST00000380043 BAZ1BQ9UIG0 1483 aaKnown RBP17.27■□□□□ 0.35
SCML1-202ENST00000380043 EIF4G1Q04637 1599 aaKnown RBP17.22■□□□□ 0.35
SCML1-202ENST00000380043 PEG3Q9GZU2 1588 aa17.2■□□□□ 0.34
SCML1-202ENST00000380043 PCGF6Q9BYE7 350 aa17.15■□□□□ 0.34
SCML1-202ENST00000380043 SOGA1O94964 1423 aa17.07■□□□□ 0.32
SCML1-202ENST00000380043 RUSC2Q8N2Y8 1516 aa17.02■□□□□ 0.31
SCML1-202ENST00000380043 WRNQ14191 1432 aaPredicted RBP eCLIP17.02■□□□□ 0.31
SCML1-202ENST00000380043 NCAPD3P42695 1498 aa17.01■□□□□ 0.31
SCML1-202ENST00000380043 PPARGC1BQ86YN6 1023 aaKnown RBP17.01■□□□□ 0.31
SCML1-202ENST00000380043 SYNJ1O43426 1573 aa16.93■□□□□ 0.3
SCML1-202ENST00000380043 HMGXB3Q12766 1538 aa16.92■□□□□ 0.3
SCML1-202ENST00000380043 CC2D2AQ9P2K1 1620 aa16.91■□□□□ 0.3
SCML1-202ENST00000380043 CSRNP3Q8WYN3 585 aa16.9■□□□□ 0.3
SCML1-202ENST00000380043 UBTFP17480 764 aaKnown RBP16.89■□□□□ 0.29
SCML1-202ENST00000380043 DNAJC5BQ9UF47 199 aa16.88■□□□□ 0.29
SCML1-202ENST00000380043 TTBK1Q5TCY1 1321 aaPredicted RBP16.87■□□□□ 0.29
SCML1-202ENST00000380043 RANGAP1P46060 587 aaPredicted RBP16.87■□□□□ 0.29
SCML1-202ENST00000380043 CFTRP13569 1480 aa16.77■□□□□ 0.27
SCML1-202ENST00000380043 TRIM26Q12899 539 aaPredicted RBP16.77■□□□□ 0.27
SCML1-202ENST00000380043 HRCP23327 699 aa16.76■□□□□ 0.27
SCML1-202ENST00000380043 CADPSQ9ULU8 1353 aa16.72■□□□□ 0.27
SCML1-202ENST00000380043 CEP162Q5TB80 1403 aa16.71■□□□□ 0.26
SCML1-202ENST00000380043 CUX1P39880 1505 aa16.7■□□□□ 0.26
SCML1-202ENST00000380043 NESP48681 1621 aa16.7■□□□□ 0.26
SCML1-202ENST00000380043 EEA1Q15075 1411 aa16.69■□□□□ 0.26
SCML1-202ENST00000380043 TOP2BQ02880 1626 aa16.68■□□□□ 0.26
SCML1-202ENST00000380043 TNIKQ9UKE5 1360 aa16.64■□□□□ 0.25
SCML1-202ENST00000380043 GOLGA3Q08378 1498 aa16.64■□□□□ 0.25
SCML1-202ENST00000380043 RAPGEF2Q9Y4G8 1499 aa16.64■□□□□ 0.25
SCML1-202ENST00000380043 CEP164Q9UPV0 1460 aa16.58■□□□□ 0.25
SCML1-202ENST00000380043 BIVM-ERCC5R4GMW8 1640 aa16.58■□□□□ 0.25
SCML1-202ENST00000380043 FANCD2Q9BXW9 1451 aa16.57■□□□□ 0.24
SCML1-202ENST00000380043 CUX2O14529 1486 aa16.51■□□□□ 0.23
SCML1-202ENST00000380043 KIF27Q86VH2 1401 aa16.51■□□□□ 0.23
SCML1-202ENST00000380043 FGD5Q6ZNL6 1462 aa16.51■□□□□ 0.23
SCML1-202ENST00000380043 CLIP1P30622 1438 aa16.5■□□□□ 0.23
SCML1-202ENST00000380043 KIF21BO75037 1637 aa16.48■□□□□ 0.23
SCML1-202ENST00000380043 RAD54L2Q9Y4B4 1467 aa16.47■□□□□ 0.23
SCML1-202ENST00000380043 PRDM2Q13029 1718 aa16.44■□□□□ 0.22
SCML1-202ENST00000380043 PRXQ9BXM0 1461 aa16.43■□□□□ 0.22
SCML1-202ENST00000380043 IGF1RP08069 1367 aa16.41■□□□□ 0.22
SCML1-202ENST00000380043 TOPBP1Q92547 1522 aa16.39■□□□□ 0.21
SCML1-202ENST00000380043 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.37■□□□□ 0.21
SCML1-202ENST00000380043 POLA1P09884 1462 aaPredicted RBP16.37■□□□□ 0.21
SCML1-202ENST00000380043 TDRD9Q8NDG6 1382 aaKnown RBP16.35■□□□□ 0.21
SCML1-202ENST00000380043 URB2Q14146 1524 aaKnown RBP16.35■□□□□ 0.21
SCML1-202ENST00000380043 APLP2Q06481 763 aa16.35■□□□□ 0.21
SCML1-202ENST00000380043 CARMIL1Q5VZK9 1371 aa16.34■□□□□ 0.21
SCML1-202ENST00000380043 P3H3Q8IVL6 736 aa16.34■□□□□ 0.21
SCML1-202ENST00000380043 LAMC3Q9Y6N6 1575 aa16.33■□□□□ 0.2
SCML1-202ENST00000380043 PDS5BQ9NTI5 1447 aa16.32■□□□□ 0.2
SCML1-202ENST00000380043 DNMBPQ6XZF7 1577 aa16.32■□□□□ 0.2
SCML1-202ENST00000380043 VPS8Q8N3P4 1428 aa16.31■□□□□ 0.2
SCML1-202ENST00000380043 ERICH3Q5RHP9 1530 aa16.3■□□□□ 0.2
SCML1-202ENST00000380043 KIF21AQ7Z4S6 1674 aa16.28■□□□□ 0.2
SCML1-202ENST00000380043 HNRNPUL2Q1KMD3 747 aaKnown RBP16.27■□□□□ 0.2
SCML1-202ENST00000380043 ARAP1Q96P48 1450 aa16.27■□□□□ 0.2
SCML1-202ENST00000380043 ATP1B4Q9UN42 357 aaPredicted RBP16.25■□□□□ 0.19
SCML1-202ENST00000380043 KANK4Q5T7N3 995 aaPredicted RBP16.24■□□□□ 0.19
SCML1-202ENST00000380043 CCER1Q8TC90 406 aaPredicted RBP16.23■□□□□ 0.19
SCML1-202ENST00000380043 ABCA10Q8WWZ4 1543 aa16.23■□□□□ 0.19
SCML1-202ENST00000380043 ARHGAP35Q9NRY4 1499 aa16.21■□□□□ 0.18
SCML1-202ENST00000380043 AQRO60306 1485 aaKnown RBP eCLIP16.15■□□□□ 0.189e-8■□□□□ 10.6
SCML1-202ENST00000380043 GAPVD1Q14C86 1478 aa16.14■□□□□ 0.17
SCML1-202ENST00000380043 ERCC6Q03468 1493 aa16.1■□□□□ 0.17
SCML1-202ENST00000380043 FHOD3Q2V2M9 1422 aa16.1■□□□□ 0.17
SCML1-202ENST00000380043 ITGAEP38570 1179 aa16.1■□□□□ 0.17
SCML1-202ENST00000380043 MRC2Q9UBG0 1479 aa16.08■□□□□ 0.16
SCML1-202ENST00000380043 ZEB1P37275 1124 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms