RNA–Protein interactions for RNA: ENST00000472481.5

RPL13A-204, Transcript of ribosomal protein L13a, humanhuman

TSL 2

Gene RPL13A, Length 728 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-204ENST00000472481 NISCHQ9Y2I1 1504 aa37.13■■■■□ 3.53
RPL13A-204ENST00000472481 CCDC180Q9P1Z9 1646 aa33.02■■■□□ 2.88
RPL13A-204ENST00000472481 ABCC9O60706 1549 aa31.99■■■□□ 2.71
RPL13A-204ENST00000472481 ZCCHC6Q5VYS8 1495 aaKnown RBP31.03■■■□□ 2.56
RPL13A-204ENST00000472481 NACADO15069 1562 aa30.88■■■□□ 2.53
RPL13A-204ENST00000472481 RB1CC1Q8TDY2 1594 aa30.87■■■□□ 2.53
RPL13A-204ENST00000472481 MYO15BQ96JP2 1530 aa30.77■■■□□ 2.52
RPL13A-204ENST00000472481 DCAF1Q9Y4B6 1507 aa30.73■■■□□ 2.51
RPL13A-204ENST00000472481 DCAF8L2P0C7V8 631 aa30.66■■■□□ 2.5
RPL13A-204ENST00000472481 UNC13AQ9UPW8 1703 aa30.42■■■□□ 2.46
RPL13A-204ENST00000472481 SCRIBQ14160 1630 aa30.12■■■□□ 2.41
RPL13A-204ENST00000472481 BICRAQ9NZM4 1560 aa30.07■■■□□ 2.4
RPL13A-204ENST00000472481 PABPN1Q86U42 306 aaKnown RBP eCLIP29.83■■■□□ 2.374e-6■□□□□ 9.3
RPL13A-204ENST00000472481 SHROOM4Q9ULL8 1493 aa29.63■■■□□ 2.33
RPL13A-204ENST00000472481 EIF4G1Q04637 1599 aaKnown RBP29.18■■■□□ 2.26
RPL13A-204ENST00000472481 DNAJC5BQ9UF47 199 aa29.15■■■□□ 2.26
RPL13A-204ENST00000472481 CC2D2AQ9P2K1 1620 aa29.02■■■□□ 2.24
RPL13A-204ENST00000472481 CECR2Q9BXF3 1484 aa28.92■■■□□ 2.22
RPL13A-204ENST00000472481 SMARCA4P51532 1647 aa28.83■■■□□ 2.21
RPL13A-204ENST00000472481 BAZ1AQ9NRL2 1556 aaPredicted RBP28.75■■■□□ 2.19
RPL13A-204ENST00000472481 MROH2BQ7Z745 1585 aa28.66■■■□□ 2.18
RPL13A-204ENST00000472481 PEG3Q9GZU2 1588 aa28.54■■■□□ 2.16
RPL13A-204ENST00000472481 ATAD2BQ9ULI0 1458 aa28.54■■■□□ 2.16
RPL13A-204ENST00000472481 SMARCA2P51531 1590 aa28.5■■■□□ 2.15
RPL13A-204ENST00000472481 NCAPD3P42695 1498 aa28.46■■■□□ 2.15
RPL13A-204ENST00000472481 HMGXB3Q12766 1538 aa28.43■■■□□ 2.14
RPL13A-204ENST00000472481 WIZO95785 1651 aa28.4■■■□□ 2.14
RPL13A-204ENST00000472481 RSF1Q96T23 1441 aaPredicted RBP28.34■■■□□ 2.13
RPL13A-204ENST00000472481 BAZ1BQ9UIG0 1483 aaKnown RBP28.29■■■□□ 2.12
RPL13A-204ENST00000472481 TOP2AP11388 1531 aaKnown RBP28.07■■■□□ 2.08
RPL13A-204ENST00000472481 NESP48681 1621 aa27.8■■■□□ 2.04
RPL13A-204ENST00000472481 LAMC3Q9Y6N6 1575 aa27.73■■■□□ 2.03
RPL13A-204ENST00000472481 CCDC88BA6NC98 1476 aa27.68■■■□□ 2.02
RPL13A-204ENST00000472481 SUPT5HO00267 1087 aaKnown RBP27.6■■■□□ 2.01
RPL13A-204ENST00000472481 CADPSQ9ULU8 1353 aa27.6■■■□□ 2.01
RPL13A-204ENST00000472481 KIF21AQ7Z4S6 1674 aa27.58■■■□□ 2.01
RPL13A-204ENST00000472481 PRDM2Q13029 1718 aa27.55■■■□□ 2
RPL13A-204ENST00000472481 CFTRP13569 1480 aa27.54■■■□□ 2
RPL13A-204ENST00000472481 ERCC6Q03468 1493 aa27.48■■□□□ 1.99
RPL13A-204ENST00000472481 THOC2Q8NI27 1593 aaKnown RBP27.43■■□□□ 1.98
RPL13A-204ENST00000472481 PDS5BQ9NTI5 1447 aa27.41■■□□□ 1.98
RPL13A-204ENST00000472481 FANCD2Q9BXW9 1451 aa27.33■■□□□ 1.97
RPL13A-204ENST00000472481 CEP164Q9UPV0 1460 aa27.28■■□□□ 1.96
RPL13A-204ENST00000472481 MRC2Q9UBG0 1479 aa27.21■■□□□ 1.95
RPL13A-204ENST00000472481 WDR62O43379 1518 aa27.19■■□□□ 1.94
RPL13A-204ENST00000472481 CUX2O14529 1486 aa27.17■■□□□ 1.94
RPL13A-204ENST00000472481 URB2Q14146 1524 aaKnown RBP27.12■■□□□ 1.93
RPL13A-204ENST00000472481 DNMBPQ6XZF7 1577 aa26.97■■□□□ 1.91
RPL13A-204ENST00000472481 TOPBP1Q92547 1522 aa26.96■■□□□ 1.91
RPL13A-204ENST00000472481 CUX1P39880 1505 aa26.88■■□□□ 1.89
RPL13A-204ENST00000472481 ABCC8Q09428 1581 aa26.85■■□□□ 1.89
RPL13A-204ENST00000472481 POLA1P09884 1462 aaPredicted RBP26.75■■□□□ 1.87
RPL13A-204ENST00000472481 BIVM-ERCC5R4GMW8 1640 aa26.75■■□□□ 1.87
RPL13A-204ENST00000472481 SYNJ1O43426 1573 aa26.75■■□□□ 1.87
RPL13A-204ENST00000472481 TARBP1Q13395 1621 aaKnown RBP26.73■■□□□ 1.87
RPL13A-204ENST00000472481 FGD5Q6ZNL6 1462 aa26.71■■□□□ 1.87
RPL13A-204ENST00000472481 TOP2BQ02880 1626 aa26.7■■□□□ 1.86
RPL13A-204ENST00000472481 IFT140Q96RY7 1462 aa26.68■■□□□ 1.86
RPL13A-204ENST00000472481 WRNQ14191 1432 aaPredicted RBP eCLIP26.67■■□□□ 1.86
RPL13A-204ENST00000472481 WDR97A6NE52 1622 aa26.65■■□□□ 1.86
RPL13A-204ENST00000472481 ZNF608Q9ULD9 1512 aaPredicted RBP26.63■■□□□ 1.85
RPL13A-204ENST00000472481 RAD54L2Q9Y4B4 1467 aa26.62■■□□□ 1.85
RPL13A-204ENST00000472481 EIF4G3O43432 1585 aaKnown RBP26.6■■□□□ 1.85
RPL13A-204ENST00000472481 SOGA1O94964 1423 aa26.53■■□□□ 1.84
RPL13A-204ENST00000472481 ABCA10Q8WWZ4 1543 aa26.45■■□□□ 1.83
RPL13A-204ENST00000472481 ABCA5Q8WWZ7 1642 aa26.44■■□□□ 1.82
RPL13A-204ENST00000472481 AQRO60306 1485 aaKnown RBP eCLIP26.42■■□□□ 1.826e-18■■■■■ 35.8
RPL13A-204ENST00000472481 PBRM1Q86U86 1689 aa26.4■■□□□ 1.82
RPL13A-204ENST00000472481 TDRD9Q8NDG6 1382 aaKnown RBP26.37■■□□□ 1.81
RPL13A-204ENST00000472481 GAPVD1Q14C86 1478 aa26.28■■□□□ 1.8
RPL13A-204ENST00000472481 CHD1O14646 1710 aa26.26■■□□□ 1.79
RPL13A-204ENST00000472481 SNAPC4Q5SXM2 1469 aa26.24■■□□□ 1.79
RPL13A-204ENST00000472481 GRIN2BQ13224 1484 aa26.23■■□□□ 1.79
RPL13A-204ENST00000472481 MAGI1Q96QZ7 1491 aaPredicted RBP26.17■■□□□ 1.78
RPL13A-204ENST00000472481 ADAMTS12P58397 1594 aa26.16■■□□□ 1.78
RPL13A-204ENST00000472481 ERICH3Q5RHP9 1530 aa26.14■■□□□ 1.77
RPL13A-204ENST00000472481 SYNJ2O15056 1496 aa26.07■■□□□ 1.76
RPL13A-204ENST00000472481 KIF27Q86VH2 1401 aa26.05■■□□□ 1.76
RPL13A-204ENST00000472481 TRIM41Q8WV44 630 aa26.02■■□□□ 1.76
RPL13A-204ENST00000472481 RUSC2Q8N2Y8 1516 aa26.01■■□□□ 1.75
RPL13A-204ENST00000472481 CUL7Q14999 1698 aa25.99■■□□□ 1.75
RPL13A-204ENST00000472481 DNAJC5Q9H3Z4 198 aa25.98■■□□□ 1.75
RPL13A-204ENST00000472481 GRIN2AQ12879 1464 aa25.96■■□□□ 1.75
RPL13A-204ENST00000472481 FHAD1B1AJZ9 1412 aa25.96■■□□□ 1.75
RPL13A-204ENST00000472481 IGF1RP08069 1367 aa25.94■■□□□ 1.74
RPL13A-204ENST00000472481 CHIC1Q5VXU3 224 aa25.93■■□□□ 1.74
RPL13A-204ENST00000472481 CLASP1Q7Z460 1538 aa25.93■■□□□ 1.74
RPL13A-204ENST00000472481 FBLN2P98095 1184 aa25.9■■□□□ 1.74
RPL13A-204ENST00000472481 OSCARQ8IYS5 282 aa25.9■■□□□ 1.74
RPL13A-204ENST00000472481 CEP170Q5SW79 1584 aa25.9■■□□□ 1.74
RPL13A-204ENST00000472481 CHMP7Q8WUX9 453 aaPredicted RBP25.87■■□□□ 1.73
RPL13A-204ENST00000472481 NUP160Q12769 1436 aa25.84■■□□□ 1.73
RPL13A-204ENST00000472481 CARMIL1Q5VZK9 1371 aa25.76■■□□□ 1.71
RPL13A-204ENST00000472481 RIMBP3CA6NJZ7 1639 aa25.74■■□□□ 1.71
RPL13A-204ENST00000472481 RIMBP3BA6NNM3 1639 aa25.74■■□□□ 1.71
RPL13A-204ENST00000472481 RIMBP3Q9UFD9 1639 aa25.74■■□□□ 1.71
RPL13A-204ENST00000472481 ARHGEF11O15085 1522 aa25.72■■□□□ 1.71
RPL13A-204ENST00000472481 SHROOM2Q13796 1616 aa25.71■■□□□ 1.71
RPL13A-204ENST00000472481 PRXQ9BXM0 1461 aa25.7■■□□□ 1.7
RPL13A-204ENST00000472481 RAPGEF2Q9Y4G8 1499 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms