RNA–Protein interactions for RNA: ENST00000370986.8

GADD45A-202, Transcript of growth arrest and DNA damage inducible alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GADD45A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45A-202ENST00000370986 NISCHQ9Y2I1 1504 aa54.8■■■■■ 6.36
GADD45A-202ENST00000370986 CCDC180Q9P1Z9 1646 aa48.49■■■■■ 5.35
GADD45A-202ENST00000370986 ABCC9O60706 1549 aa46.48■■■■■ 5.03
GADD45A-202ENST00000370986 ZCCHC6Q5VYS8 1495 aaKnown RBP45.82■■■■■ 4.93
GADD45A-202ENST00000370986 DCAF1Q9Y4B6 1507 aa45.5■■■■■ 4.87
GADD45A-202ENST00000370986 MYO15BQ96JP2 1530 aa45.44■■■■■ 4.87
GADD45A-202ENST00000370986 NACADO15069 1562 aa45.4■■■■■ 4.86
GADD45A-202ENST00000370986 DCAF8L2P0C7V8 631 aa45.39■■■■■ 4.86
GADD45A-202ENST00000370986 RB1CC1Q8TDY2 1594 aa45.25■■■■■ 4.83
GADD45A-202ENST00000370986 SCRIBQ14160 1630 aa44.13■■■■■ 4.65
GADD45A-202ENST00000370986 UNC13AQ9UPW8 1703 aa44.07■■■■■ 4.64
GADD45A-202ENST00000370986 BICRAQ9NZM4 1560 aa43.66■■■■■ 4.58
GADD45A-202ENST00000370986 SHROOM4Q9ULL8 1493 aa43.59■■■■■ 4.57
GADD45A-202ENST00000370986 PABPN1Q86U42 306 aaKnown RBP eCLIP43.5■■■■■ 4.55
GADD45A-202ENST00000370986 EIF4G1Q04637 1599 aaKnown RBP42.52■■■■■ 4.4
GADD45A-202ENST00000370986 BAZ1AQ9NRL2 1556 aaPredicted RBP42.5■■■■■ 4.39
GADD45A-202ENST00000370986 CECR2Q9BXF3 1484 aa42.46■■■■■ 4.39
GADD45A-202ENST00000370986 DNAJC5BQ9UF47 199 aa42.43■■■■■ 4.38
GADD45A-202ENST00000370986 SMARCA4P51532 1647 aa42.36■■■■■ 4.37
GADD45A-202ENST00000370986 MROH2BQ7Z745 1585 aa42.15■■■■■ 4.34
GADD45A-202ENST00000370986 CC2D2AQ9P2K1 1620 aa42.12■■■■■ 4.33
GADD45A-202ENST00000370986 SMARCA2P51531 1590 aa42.02■■■■■ 4.32
GADD45A-202ENST00000370986 RSF1Q96T23 1441 aaPredicted RBP42■■■■■ 4.31
GADD45A-202ENST00000370986 PEG3Q9GZU2 1588 aa41.99■■■■■ 4.31
GADD45A-202ENST00000370986 ATAD2BQ9ULI0 1458 aa41.9■■■■■ 4.3
GADD45A-202ENST00000370986 NCAPD3P42695 1498 aa41.82■■■■■ 4.29
GADD45A-202ENST00000370986 WIZO95785 1651 aa41.74■■■■■ 4.27
GADD45A-202ENST00000370986 HMGXB3Q12766 1538 aa41.73■■■■■ 4.27
GADD45A-202ENST00000370986 BAZ1BQ9UIG0 1483 aaKnown RBP41.66■■■■■ 4.26
GADD45A-202ENST00000370986 SUPT5HO00267 1087 aaKnown RBP41.49■■■■■ 4.23
GADD45A-202ENST00000370986 TOP2AP11388 1531 aaKnown RBP41.46■■■■■ 4.23
GADD45A-202ENST00000370986 CCDC88BA6NC98 1476 aa40.88■■■■■ 4.13
GADD45A-202ENST00000370986 LAMC3Q9Y6N6 1575 aa40.65■■■■■ 4.1
GADD45A-202ENST00000370986 CADPSQ9ULU8 1353 aa40.64■■■■■ 4.1
GADD45A-202ENST00000370986 CFTRP13569 1480 aa40.55■■■■■ 4.08
GADD45A-202ENST00000370986 NESP48681 1621 aa40.39■■■■■ 4.06
GADD45A-202ENST00000370986 PRDM2Q13029 1718 aa40.39■■■■■ 4.06
GADD45A-202ENST00000370986 PDS5BQ9NTI5 1447 aa40.36■■■■■ 4.05
GADD45A-202ENST00000370986 FANCD2Q9BXW9 1451 aa40.15■■■■■ 4.02
GADD45A-202ENST00000370986 ERCC6Q03468 1493 aa40.14■■■■■ 4.02
GADD45A-202ENST00000370986 CEP164Q9UPV0 1460 aa40.08■■■■■ 4.01
GADD45A-202ENST00000370986 KIF21AQ7Z4S6 1674 aa40.03■■■■■ 4
GADD45A-202ENST00000370986 MRC2Q9UBG0 1479 aa39.83■■■■□ 3.97
GADD45A-202ENST00000370986 ABCC8Q09428 1581 aa39.82■■■■□ 3.96
GADD45A-202ENST00000370986 THOC2Q8NI27 1593 aaKnown RBP39.71■■■■□ 3.95
GADD45A-202ENST00000370986 WRNQ14191 1432 aaPredicted RBP eCLIP39.66■■■■□ 3.94
GADD45A-202ENST00000370986 DNMBPQ6XZF7 1577 aa39.66■■■■□ 3.94
GADD45A-202ENST00000370986 WDR62O43379 1518 aa39.65■■■■□ 3.94
GADD45A-202ENST00000370986 URB2Q14146 1524 aaKnown RBP39.62■■■■□ 3.93
GADD45A-202ENST00000370986 TOPBP1Q92547 1522 aa39.58■■■■□ 3.93
GADD45A-202ENST00000370986 CUX1P39880 1505 aa39.52■■■■□ 3.92
GADD45A-202ENST00000370986 CUX2O14529 1486 aa39.5■■■■□ 3.91
GADD45A-202ENST00000370986 TOP2BQ02880 1626 aa39.49■■■■□ 3.91
GADD45A-202ENST00000370986 BIVM-ERCC5R4GMW8 1640 aa39.47■■■■□ 3.91
GADD45A-202ENST00000370986 SYNJ1O43426 1573 aa39.4■■■■□ 3.9
GADD45A-202ENST00000370986 FGD5Q6ZNL6 1462 aa39.3■■■■□ 3.88
GADD45A-202ENST00000370986 POLA1P09884 1462 aaPredicted RBP39.29■■■■□ 3.88
GADD45A-202ENST00000370986 TRIM41Q8WV44 630 aa39.26■■■■□ 3.88
GADD45A-202ENST00000370986 IFT140Q96RY7 1462 aa39.22■■■■□ 3.87
GADD45A-202ENST00000370986 CHIC1Q5VXU3 224 aa39.19■■■■□ 3.86
GADD45A-202ENST00000370986 SOGA1O94964 1423 aa39.17■■■■□ 3.86
GADD45A-202ENST00000370986 TARBP1Q13395 1621 aaKnown RBP39.07■■■■□ 3.84
GADD45A-202ENST00000370986 WDR97A6NE52 1622 aa39.03■■■■□ 3.84
GADD45A-202ENST00000370986 RAD54L2Q9Y4B4 1467 aa39.02■■■■□ 3.84
GADD45A-202ENST00000370986 ABCA10Q8WWZ4 1543 aa39.02■■■■□ 3.84
GADD45A-202ENST00000370986 KIF27Q86VH2 1401 aa38.83■■■■□ 3.81
GADD45A-202ENST00000370986 ZNF608Q9ULD9 1512 aaPredicted RBP38.78■■■■□ 3.8
GADD45A-202ENST00000370986 TDRD9Q8NDG6 1382 aaKnown RBP38.77■■■■□ 3.8
GADD45A-202ENST00000370986 EIF4G3O43432 1585 aaKnown RBP38.77■■■■□ 3.8
GADD45A-202ENST00000370986 ABCA5Q8WWZ7 1642 aa38.76■■■■□ 3.8
GADD45A-202ENST00000370986 GAPVD1Q14C86 1478 aa38.75■■■■□ 3.79
GADD45A-202ENST00000370986 EEA1Q15075 1411 aa38.71■■■■□ 3.79
GADD45A-202ENST00000370986 AQRO60306 1485 aaKnown RBP eCLIP38.7■■■■□ 3.792e-8■■■■□ 20.7
GADD45A-202ENST00000370986 GRIN2BQ13224 1484 aa38.68■■■■□ 3.78
GADD45A-202ENST00000370986 ERICH3Q5RHP9 1530 aa38.61■■■■□ 3.77
GADD45A-202ENST00000370986 PBRM1Q86U86 1689 aa38.6■■■■□ 3.77
GADD45A-202ENST00000370986 MAGI1Q96QZ7 1491 aaPredicted RBP38.52■■■■□ 3.76
GADD45A-202ENST00000370986 CUL7Q14999 1698 aa38.45■■■■□ 3.75
GADD45A-202ENST00000370986 IGF1RP08069 1367 aa38.44■■■■□ 3.74
GADD45A-202ENST00000370986 RUSC2Q8N2Y8 1516 aa38.44■■■■□ 3.74
GADD45A-202ENST00000370986 SNAPC4Q5SXM2 1469 aa38.42■■■■□ 3.74
GADD45A-202ENST00000370986 CSRNP3Q8WYN3 585 aa38.39■■■■□ 3.74
GADD45A-202ENST00000370986 FHAD1B1AJZ9 1412 aa38.37■■■■□ 3.73
GADD45A-202ENST00000370986 ADAMTS12P58397 1594 aa38.33■■■■□ 3.73
GADD45A-202ENST00000370986 SYNJ2O15056 1496 aa38.32■■■■□ 3.72
GADD45A-202ENST00000370986 CARMIL1Q5VZK9 1371 aa38.3■■■■□ 3.72
GADD45A-202ENST00000370986 FAM9AQ8IZU1 332 aaPredicted RBP38.28■■■■□ 3.72
GADD45A-202ENST00000370986 CHMP7Q8WUX9 453 aaPredicted RBP38.24■■■■□ 3.71
GADD45A-202ENST00000370986 PRXQ9BXM0 1461 aa38.2■■■■□ 3.71
GADD45A-202ENST00000370986 RAPGEF2Q9Y4G8 1499 aa38.18■■■■□ 3.7
GADD45A-202ENST00000370986 FBLN2P98095 1184 aa38.15■■■■□ 3.7
GADD45A-202ENST00000370986 GRIN2AQ12879 1464 aa38.14■■■■□ 3.7
GADD45A-202ENST00000370986 DNAJC5Q9H3Z4 198 aa38.13■■■■□ 3.69
GADD45A-202ENST00000370986 KIF21BO75037 1637 aa38.12■■■■□ 3.69
GADD45A-202ENST00000370986 CHD1O14646 1710 aa38.12■■■■□ 3.69
GADD45A-202ENST00000370986 GOLGA3Q08378 1498 aa37.98■■■■□ 3.67
GADD45A-202ENST00000370986 OSCARQ8IYS5 282 aa37.95■■■■□ 3.67
GADD45A-202ENST00000370986 NUP160Q12769 1436 aa37.93■■■■□ 3.66
GADD45A-202ENST00000370986 CEP170Q5SW79 1584 aa37.84■■■■□ 3.65
GADD45A-202ENST00000370986 KIAA0586Q9BVV6 1533 aa37.8■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms