RNA–Protein interactions for RNA: ENST00000395580.7

PPHLN1-206, Transcript of periphilin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPHLN1, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPHLN1-206ENST00000395580 NISCHQ9Y2I1 1504 aa30.25■■■□□ 2.43
PPHLN1-206ENST00000395580 CCDC180Q9P1Z9 1646 aa26.13■■□□□ 1.77
PPHLN1-206ENST00000395580 ZCCHC6Q5VYS8 1495 aaKnown RBP25.58■■□□□ 1.68
PPHLN1-206ENST00000395580 DCAF1Q9Y4B6 1507 aa25.08■■□□□ 1.61
PPHLN1-206ENST00000395580 SHROOM4Q9ULL8 1493 aa25.03■■□□□ 1.6
PPHLN1-206ENST00000395580 DCAF8L2P0C7V8 631 aa24.56■■□□□ 1.52
PPHLN1-206ENST00000395580 MYO15BQ96JP2 1530 aa24.53■■□□□ 1.52
PPHLN1-206ENST00000395580 SUPT5HO00267 1087 aaKnown RBP24.41■■□□□ 1.5
PPHLN1-206ENST00000395580 NACADO15069 1562 aa24.13■■□□□ 1.45
PPHLN1-206ENST00000395580 ABCC9O60706 1549 aa24.09■■□□□ 1.45
PPHLN1-206ENST00000395580 SCRIBQ14160 1630 aa24.03■■□□□ 1.44
PPHLN1-206ENST00000395580 CHIC1Q5VXU3 224 aa23.8■■□□□ 1.4
PPHLN1-206ENST00000395580 RB1CC1Q8TDY2 1594 aa23.74■■□□□ 1.39
PPHLN1-206ENST00000395580 RSF1Q96T23 1441 aaPredicted RBP23.71■■□□□ 1.39
PPHLN1-206ENST00000395580 CECR2Q9BXF3 1484 aa23.4■■□□□ 1.34
PPHLN1-206ENST00000395580 MROH2BQ7Z745 1585 aa23.38■■□□□ 1.33
PPHLN1-206ENST00000395580 UNC13AQ9UPW8 1703 aa23.34■■□□□ 1.33
PPHLN1-206ENST00000395580 BAZ1AQ9NRL2 1556 aaPredicted RBP23.32■■□□□ 1.32
PPHLN1-206ENST00000395580 WIZO95785 1651 aa23.23■■□□□ 1.31
PPHLN1-206ENST00000395580 SMARCA4P51532 1647 aa23.13■■□□□ 1.29
PPHLN1-206ENST00000395580 TOP2AP11388 1531 aaKnown RBP23.04■■□□□ 1.28
PPHLN1-206ENST00000395580 BICRAQ9NZM4 1560 aa23.02■■□□□ 1.28
PPHLN1-206ENST00000395580 EIF4G1Q04637 1599 aaKnown RBP22.99■■□□□ 1.27
PPHLN1-206ENST00000395580 TRIM41Q8WV44 630 aa22.94■■□□□ 1.26
PPHLN1-206ENST00000395580 PEG3Q9GZU2 1588 aa22.86■■□□□ 1.25
PPHLN1-206ENST00000395580 LOC105371045A0A1W2PR82 267 aa22.85■■□□□ 1.25
PPHLN1-206ENST00000395580 SMARCA2P51531 1590 aa22.84■■□□□ 1.25
PPHLN1-206ENST00000395580 CCDC88BA6NC98 1476 aa22.77■■□□□ 1.24
PPHLN1-206ENST00000395580 PABPN1Q86U42 306 aaKnown RBP eCLIP22.65■■□□□ 1.22
PPHLN1-206ENST00000395580 PCGF6Q9BYE7 350 aa22.55■■□□□ 1.2
PPHLN1-206ENST00000395580 HRCP23327 699 aa22.55■■□□□ 1.2
PPHLN1-206ENST00000395580 ATAD2BQ9ULI0 1458 aa22.54■■□□□ 1.2
PPHLN1-206ENST00000395580 ABCC8Q09428 1581 aa22.5■■□□□ 1.19
PPHLN1-206ENST00000395580 FAM9AQ8IZU1 332 aaPredicted RBP22.48■■□□□ 1.19
PPHLN1-206ENST00000395580 BAZ1BQ9UIG0 1483 aaKnown RBP22.45■■□□□ 1.18
PPHLN1-206ENST00000395580 TRIM26Q12899 539 aaPredicted RBP22.45■■□□□ 1.18
PPHLN1-206ENST00000395580 EEA1Q15075 1411 aa22.39■■□□□ 1.18
PPHLN1-206ENST00000395580 HMGXB3Q12766 1538 aa22.31■■□□□ 1.16
PPHLN1-206ENST00000395580 WRNQ14191 1432 aaPredicted RBP eCLIP22.3■■□□□ 1.16
PPHLN1-206ENST00000395580 NCAPD3P42695 1498 aa22.24■■□□□ 1.15
PPHLN1-206ENST00000395580 SOGA1O94964 1423 aa22.21■■□□□ 1.15
PPHLN1-206ENST00000395580 SYNJ1O43426 1573 aa22.2■■□□□ 1.14
PPHLN1-206ENST00000395580 TNIKQ9UKE5 1360 aa22.14■■□□□ 1.14
PPHLN1-206ENST00000395580 CSRNP3Q8WYN3 585 aa22.11■■□□□ 1.13
PPHLN1-206ENST00000395580 GOLGA3Q08378 1498 aa22.09■■□□□ 1.13
PPHLN1-206ENST00000395580 KIF21BO75037 1637 aa22.09■■□□□ 1.13
PPHLN1-206ENST00000395580 TOP2BQ02880 1626 aa22.09■■□□□ 1.13
PPHLN1-206ENST00000395580 RUSC2Q8N2Y8 1516 aa22.08■■□□□ 1.12
PPHLN1-206ENST00000395580 EHMT2Q96KQ7 1210 aa22.07■■□□□ 1.12
PPHLN1-206ENST00000395580 DNAJC5BQ9UF47 199 aa22.07■■□□□ 1.12
PPHLN1-206ENST00000395580 BIVM-ERCC5R4GMW8 1640 aa22.07■■□□□ 1.12
PPHLN1-206ENST00000395580 CEP162Q5TB80 1403 aa22.06■■□□□ 1.12
PPHLN1-206ENST00000395580 CEP164Q9UPV0 1460 aa22.02■■□□□ 1.11
PPHLN1-206ENST00000395580 PRDM2Q13029 1718 aa21.98■■□□□ 1.11
PPHLN1-206ENST00000395580 ZEB1P37275 1124 aaPredicted RBP21.95■■□□□ 1.1
PPHLN1-206ENST00000395580 CFTRP13569 1480 aa21.94■■□□□ 1.1
PPHLN1-206ENST00000395580 UBTFP17480 764 aaKnown RBP21.84■■□□□ 1.09
PPHLN1-206ENST00000395580 CUX1P39880 1505 aa21.82■■□□□ 1.08
PPHLN1-206ENST00000395580 PPARGC1BQ86YN6 1023 aaKnown RBP21.82■■□□□ 1.08
PPHLN1-206ENST00000395580 ERICH3Q5RHP9 1530 aa21.81■■□□□ 1.08
PPHLN1-206ENST00000395580 RAPGEF2Q9Y4G8 1499 aa21.75■■□□□ 1.07
PPHLN1-206ENST00000395580 CC2D2AQ9P2K1 1620 aa21.75■■□□□ 1.07
PPHLN1-206ENST00000395580 PRXQ9BXM0 1461 aa21.73■■□□□ 1.07
PPHLN1-206ENST00000395580 CLIP1P30622 1438 aa21.73■■□□□ 1.07
PPHLN1-206ENST00000395580 CADPSQ9ULU8 1353 aa21.69■■□□□ 1.06
PPHLN1-206ENST00000395580 KIF27Q86VH2 1401 aa21.67■■□□□ 1.06
PPHLN1-206ENST00000395580 VPS8Q8N3P4 1428 aa21.66■■□□□ 1.06
PPHLN1-206ENST00000395580 FGD5Q6ZNL6 1462 aa21.46■■□□□ 1.03
PPHLN1-206ENST00000395580 FANCD2Q9BXW9 1451 aa21.46■■□□□ 1.03
PPHLN1-206ENST00000395580 ARAP1Q96P48 1450 aa21.45■■□□□ 1.02
PPHLN1-206ENST00000395580 DNMBPQ6XZF7 1577 aa21.44■■□□□ 1.02
PPHLN1-206ENST00000395580 CUX2O14529 1486 aa21.44■■□□□ 1.02
PPHLN1-206ENST00000395580 CCER1Q8TC90 406 aaPredicted RBP21.4■■□□□ 1.02
PPHLN1-206ENST00000395580 LAMC3Q9Y6N6 1575 aa21.39■■□□□ 1.02
PPHLN1-206ENST00000395580 APLP2Q06481 763 aa21.38■■□□□ 1.01
PPHLN1-206ENST00000395580 IGF1RP08069 1367 aa21.38■■□□□ 1.01
PPHLN1-206ENST00000395580 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.37■■□□□ 1.01
PPHLN1-206ENST00000395580 TTBK1Q5TCY1 1321 aaPredicted RBP21.34■■□□□ 1.01
PPHLN1-206ENST00000395580 ABCA10Q8WWZ4 1543 aa21.33■■□□□ 1
PPHLN1-206ENST00000395580 TOPBP1Q92547 1522 aa21.33■■□□□ 1
PPHLN1-206ENST00000395580 ARHGAP35Q9NRY4 1499 aa21.31■■□□□ 1
PPHLN1-206ENST00000395580 CARMIL1Q5VZK9 1371 aa21.29■■□□□ 1
PPHLN1-206ENST00000395580 POLA1P09884 1462 aaPredicted RBP21.27■□□□□ 0.99
PPHLN1-206ENST00000395580 CUL7Q14999 1698 aa21.25■□□□□ 0.99
PPHLN1-206ENST00000395580 NESP48681 1621 aa21.25■□□□□ 0.99
PPHLN1-206ENST00000395580 WDR97A6NE52 1622 aa21.24■□□□□ 0.99
PPHLN1-206ENST00000395580 MAP3K1Q13233 1512 aa21.23■□□□□ 0.99
PPHLN1-206ENST00000395580 RANGAP1P46060 587 aaPredicted RBP21.2■□□□□ 0.98
PPHLN1-206ENST00000395580 PDS5BQ9NTI5 1447 aa21.16■□□□□ 0.98
PPHLN1-206ENST00000395580 RAD54L2Q9Y4B4 1467 aa21.16■□□□□ 0.98
PPHLN1-206ENST00000395580 URB2Q14146 1524 aaKnown RBP21.16■□□□□ 0.98
PPHLN1-206ENST00000395580 RRBP1Q9P2E9 1410 aaKnown RBP21.15■□□□□ 0.98
PPHLN1-206ENST00000395580 AEBP2Q6ZN18 517 aaPredicted RBP21.14■□□□□ 0.97
PPHLN1-206ENST00000395580 CTTNBP2Q8WZ74 1663 aa21.13■□□□□ 0.97
PPHLN1-206ENST00000395580 ABCA5Q8WWZ7 1642 aa21.12■□□□□ 0.97
PPHLN1-206ENST00000395580 EFCAB5A4FU69 1503 aa21.12■□□□□ 0.97
PPHLN1-206ENST00000395580 TIAM1Q13009 1591 aa21.11■□□□□ 0.97
PPHLN1-206ENST00000395580 FHAD1B1AJZ9 1412 aa21.09■□□□□ 0.97
PPHLN1-206ENST00000395580 HNRNPUL2Q1KMD3 747 aaKnown RBP21.08■□□□□ 0.96
PPHLN1-206ENST00000395580 KANK4Q5T7N3 995 aaPredicted RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms