RNA–Protein interactions for RNA: ENST00000340170.8

HIRA-202, Transcript of histone cell cycle regulator, humanhuman

TSL 1 (best) BASIC

Gene HIRA, Length 3,395 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIRA-202ENST00000340170 NISCHQ9Y2I1 1504 aa44.21■■■■■ 4.67
HIRA-202ENST00000340170 SHROOM4Q9ULL8 1493 aa39.37■■■■□ 3.89
HIRA-202ENST00000340170 SUPT5HO00267 1087 aaKnown RBP38.83■■■■□ 3.81
HIRA-202ENST00000340170 DCAF8L2P0C7V8 631 aa38.44■■■■□ 3.74
HIRA-202ENST00000340170 PCGF6Q9BYE7 350 aa37.34■■■■□ 3.57
HIRA-202ENST00000340170 ZCCHC6Q5VYS8 1495 aaKnown RBP37.31■■■■□ 3.56
HIRA-202ENST00000340170 CHIC1Q5VXU3 224 aa37.21■■■■□ 3.55
HIRA-202ENST00000340170 PPARGC1BQ86YN6 1023 aaKnown RBP37.18■■■■□ 3.54
HIRA-202ENST00000340170 HRCP23327 699 aa37.14■■■■□ 3.54
HIRA-202ENST00000340170 MYO15BQ96JP2 1530 aa36.99■■■■□ 3.51
HIRA-202ENST00000340170 CCDC180Q9P1Z9 1646 aa36.79■■■■□ 3.48
HIRA-202ENST00000340170 LOC105371045A0A1W2PR82 267 aa36.66■■■■□ 3.46
HIRA-202ENST00000340170 EHMT2Q96KQ7 1210 aa36.32■■■■□ 3.4
HIRA-202ENST00000340170 FAM9AQ8IZU1 332 aaPredicted RBP36.11■■■■□ 3.37
HIRA-202ENST00000340170 TRIM41Q8WV44 630 aa35.77■■■■□ 3.32
HIRA-202ENST00000340170 DCAF1Q9Y4B6 1507 aa35.62■■■■□ 3.29
HIRA-202ENST00000340170 TRIM26Q12899 539 aaPredicted RBP35.61■■■■□ 3.29
HIRA-202ENST00000340170 SCRIBQ14160 1630 aa35.58■■■■□ 3.29
HIRA-202ENST00000340170 RSF1Q96T23 1441 aaPredicted RBP35.37■■■■□ 3.25
HIRA-202ENST00000340170 ABCC9O60706 1549 aa35.23■■■■□ 3.23
HIRA-202ENST00000340170 TTBK1Q5TCY1 1321 aaPredicted RBP35.12■■■■□ 3.21
HIRA-202ENST00000340170 SCAF1Q9H7N4 1312 aaKnown RBP35.12■■■■□ 3.21
HIRA-202ENST00000340170 RB1CC1Q8TDY2 1594 aa35.06■■■■□ 3.2
HIRA-202ENST00000340170 CECR2Q9BXF3 1484 aa34.93■■■■□ 3.18
HIRA-202ENST00000340170 ZEB1P37275 1124 aaPredicted RBP34.89■■■■□ 3.18
HIRA-202ENST00000340170 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.8■■■■□ 3.16
HIRA-202ENST00000340170 PELP1Q8IZL8 1130 aaKnown RBP34.68■■■■□ 3.14
HIRA-202ENST00000340170 MROH2BQ7Z745 1585 aa34.65■■■■□ 3.14
HIRA-202ENST00000340170 CCER1Q8TC90 406 aaPredicted RBP34.64■■■■□ 3.14
HIRA-202ENST00000340170 NEUROD1Q13562 356 aa34.46■■■■□ 3.11
HIRA-202ENST00000340170 WIZO95785 1651 aa34.45■■■■□ 3.1
HIRA-202ENST00000340170 GTF3C3Q9Y5Q9 886 aa34.34■■■■□ 3.09
HIRA-202ENST00000340170 YTHDC1Q96MU7 727 aaKnown RBP34.31■■■■□ 3.08
HIRA-202ENST00000340170 NACADO15069 1562 aa34.28■■■■□ 3.08
HIRA-202ENST00000340170 ACIN1Q9UKV3 1341 aaKnown RBP34.27■■■■□ 3.08
HIRA-202ENST00000340170 UBTFP17480 764 aaKnown RBP34.26■■■■□ 3.08
HIRA-202ENST00000340170 PABPN1Q86U42 306 aaKnown RBP eCLIP34.22■■■■□ 3.071e-8■■■■■ 32.2
HIRA-202ENST00000340170 DIEXFQ68CQ4 756 aaKnown RBP34.19■■■■□ 3.06
HIRA-202ENST00000340170 RANGAP1P46060 587 aaPredicted RBP34.17■■■■□ 3.06
HIRA-202ENST00000340170 ABCC8Q09428 1581 aa34.09■■■■□ 3.05
HIRA-202ENST00000340170 CENPBP07199 599 aaPredicted RBP34.01■■■■□ 3.04
HIRA-202ENST00000340170 CCDC88BA6NC98 1476 aa33.99■■■■□ 3.03
HIRA-202ENST00000340170 SOGA1O94964 1423 aa33.92■■■■□ 3.02
HIRA-202ENST00000340170 BAZ1AQ9NRL2 1556 aaPredicted RBP33.88■■■■□ 3.01
HIRA-202ENST00000340170 CSRNP3Q8WYN3 585 aa33.83■■■■□ 3.01
HIRA-202ENST00000340170 HNRNPUL2Q1KMD3 747 aaKnown RBP33.82■■■■□ 3
HIRA-202ENST00000340170 CEP162Q5TB80 1403 aa33.79■■■■□ 3
HIRA-202ENST00000340170 RUSC2Q8N2Y8 1516 aa33.74■■■□□ 2.99
HIRA-202ENST00000340170 TOP2AP11388 1531 aaKnown RBP33.59■■■□□ 2.97
HIRA-202ENST00000340170 SMARCA4P51532 1647 aa33.54■■■□□ 2.96
HIRA-202ENST00000340170 APLP2Q06481 763 aa33.51■■■□□ 2.95
HIRA-202ENST00000340170 SMARCA2P51531 1590 aa33.51■■■□□ 2.95
HIRA-202ENST00000340170 TNIKQ9UKE5 1360 aa33.47■■■□□ 2.95
HIRA-202ENST00000340170 EIF4G1Q04637 1599 aaKnown RBP33.46■■■□□ 2.95
HIRA-202ENST00000340170 ZNF316A6NFI3 1004 aaPredicted RBP33.43■■■□□ 2.94
HIRA-202ENST00000340170 MIER1Q8N108 512 aa33.42■■■□□ 2.94
HIRA-202ENST00000340170 WRNQ14191 1432 aaPredicted RBP eCLIP33.34■■■□□ 2.93
HIRA-202ENST00000340170 GOLGA3Q08378 1498 aa33.26■■■□□ 2.91
HIRA-202ENST00000340170 CLIP1P30622 1438 aa33.16■■■□□ 2.9
HIRA-202ENST00000340170 EEA1Q15075 1411 aa33.15■■■□□ 2.9
HIRA-202ENST00000340170 UNC13AQ9UPW8 1703 aa33.12■■■□□ 2.89
HIRA-202ENST00000340170 ITGAEP38570 1179 aa33.07■■■□□ 2.88
HIRA-202ENST00000340170 CEP164Q9UPV0 1460 aa32.98■■■□□ 2.87
HIRA-202ENST00000340170 SYNJ1O43426 1573 aa32.96■■■□□ 2.87
HIRA-202ENST00000340170 MYT1Q01538 1121 aa32.95■■■□□ 2.87
HIRA-202ENST00000340170 RAPGEF2Q9Y4G8 1499 aa32.95■■■□□ 2.87
HIRA-202ENST00000340170 BAZ1BQ9UIG0 1483 aaKnown RBP32.91■■■□□ 2.86
HIRA-202ENST00000340170 BICRAQ9NZM4 1560 aa32.86■■■□□ 2.85
HIRA-202ENST00000340170 ATAD2BQ9ULI0 1458 aa32.82■■■□□ 2.84
HIRA-202ENST00000340170 VPS8Q8N3P4 1428 aa32.81■■■□□ 2.84
HIRA-202ENST00000340170 KANK4Q5T7N3 995 aaPredicted RBP32.76■■■□□ 2.84
HIRA-202ENST00000340170 BCANQ96GW7 911 aa32.72■■■□□ 2.83
HIRA-202ENST00000340170 ATP1B4Q9UN42 357 aaPredicted RBP32.7■■■□□ 2.83
HIRA-202ENST00000340170 KIF21BO75037 1637 aa32.55■■■□□ 2.8
HIRA-202ENST00000340170 P3H3Q8IVL6 736 aa32.51■■■□□ 2.79
HIRA-202ENST00000340170 SUPT16HQ9Y5B9 1047 aaKnown RBP32.51■■■□□ 2.79
HIRA-202ENST00000340170 KCNH8Q96L42 1107 aa32.44■■■□□ 2.78
HIRA-202ENST00000340170 PEG3Q9GZU2 1588 aa32.41■■■□□ 2.78
HIRA-202ENST00000340170 DHX57Q6P158 1386 aaKnown RBP32.37■■■□□ 2.77
HIRA-202ENST00000340170 FAM50AQ14320 339 aaKnown RBP32.35■■■□□ 2.77
HIRA-202ENST00000340170 ARAP1Q96P48 1450 aa32.3■■■□□ 2.76
HIRA-202ENST00000340170 KIF27Q86VH2 1401 aa32.27■■■□□ 2.76
HIRA-202ENST00000340170 TOP2BQ02880 1626 aa32.25■■■□□ 2.75
HIRA-202ENST00000340170 HIRIP3Q9BW71 556 aaPredicted RBP32.23■■■□□ 2.75
HIRA-202ENST00000340170 TSHZ2Q9NRE2 1034 aa32.22■■■□□ 2.75
HIRA-202ENST00000340170 PRXQ9BXM0 1461 aa32.19■■■□□ 2.74
HIRA-202ENST00000340170 CCNB3Q8WWL7 1395 aa32.16■■■□□ 2.74
HIRA-202ENST00000340170 CUX1P39880 1505 aa32.14■■■□□ 2.74
HIRA-202ENST00000340170 SIN3AQ96ST3 1273 aa32.13■■■□□ 2.73
HIRA-202ENST00000340170 FKBP8Q14318 412 aa32.13■■■□□ 2.73
HIRA-202ENST00000340170 DDX10Q13206 875 aaKnown RBP32.08■■■□□ 2.73
HIRA-202ENST00000340170 CUX2O14529 1486 aa32.08■■■□□ 2.73
HIRA-202ENST00000340170 CLSPNQ9HAW4 1339 aa32.02■■■□□ 2.72
HIRA-202ENST00000340170 TRIM52Q96A61 297 aa32.01■■■□□ 2.72
HIRA-202ENST00000340170 ARHGAP35Q9NRY4 1499 aa32.01■■■□□ 2.72
HIRA-202ENST00000340170 RAB3GAP2Q9H2M9 1393 aa32.01■■■□□ 2.71
HIRA-202ENST00000340170 ERICH3Q5RHP9 1530 aa31.97■■■□□ 2.71
HIRA-202ENST00000340170 ANP32EQ9BTT0 268 aa31.96■■■□□ 2.71
HIRA-202ENST00000340170 CARMIL1Q5VZK9 1371 aa31.92■■■□□ 2.7
HIRA-202ENST00000340170 BIVM-ERCC5R4GMW8 1640 aa31.91■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms