RNA–Protein interactions for RNA: ENST00000438013.3

GPR35-205, Transcript of G protein-coupled receptor 35, humanhuman

APPRIS P3 BASIC

Gene GPR35, Length 3,821 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPR35-205ENST00000438013 NISCHQ9Y2I1 1504 aa25.44■■□□□ 1.66
GPR35-205ENST00000438013 SUPT5HO00267 1087 aaKnown RBP22.53■■□□□ 1.2
GPR35-205ENST00000438013 SHROOM4Q9ULL8 1493 aa22.26■■□□□ 1.15
GPR35-205ENST00000438013 DCAF8L2P0C7V8 631 aa22.26■■□□□ 1.15
GPR35-205ENST00000438013 PCGF6Q9BYE7 350 aa22.19■■□□□ 1.14
GPR35-205ENST00000438013 PPARGC1BQ86YN6 1023 aaKnown RBP21.89■■□□□ 1.1
GPR35-205ENST00000438013 HRCP23327 699 aa21.77■■□□□ 1.08
GPR35-205ENST00000438013 EHMT2Q96KQ7 1210 aa21.7■■□□□ 1.06
GPR35-205ENST00000438013 ZCCHC6Q5VYS8 1495 aaKnown RBP21.47■■□□□ 1.03
GPR35-205ENST00000438013 CCDC180Q9P1Z9 1646 aa21.41■■□□□ 1.02
GPR35-205ENST00000438013 PELP1Q8IZL8 1130 aaKnown RBP21.34■■□□□ 1.01
GPR35-205ENST00000438013 FAM9AQ8IZU1 332 aaPredicted RBP21.17■□□□□ 0.98
GPR35-205ENST00000438013 LOC105371045A0A1W2PR82 267 aa21.16■□□□□ 0.98
GPR35-205ENST00000438013 TTBK1Q5TCY1 1321 aaPredicted RBP21.06■□□□□ 0.96
GPR35-205ENST00000438013 CHIC1Q5VXU3 224 aa21.01■□□□□ 0.95
GPR35-205ENST00000438013 MYO15BQ96JP2 1530 aa20.9■□□□□ 0.94
GPR35-205ENST00000438013 YTHDC1Q96MU7 727 aaKnown RBP20.87■□□□□ 0.93
GPR35-205ENST00000438013 TRIM26Q12899 539 aaPredicted RBP20.84■□□□□ 0.93
GPR35-205ENST00000438013 ZEB1P37275 1124 aaPredicted RBP20.77■□□□□ 0.91
GPR35-205ENST00000438013 CENPBP07199 599 aaPredicted RBP20.75■□□□□ 0.91
GPR35-205ENST00000438013 CCER1Q8TC90 406 aaPredicted RBP20.75■□□□□ 0.91
GPR35-205ENST00000438013 ABCC9O60706 1549 aa20.74■□□□□ 0.91
GPR35-205ENST00000438013 SCAF1Q9H7N4 1312 aaKnown RBP20.69■□□□□ 0.9
GPR35-205ENST00000438013 DCAF1Q9Y4B6 1507 aa20.61■□□□□ 0.89
GPR35-205ENST00000438013 GTF3C3Q9Y5Q9 886 aa20.58■□□□□ 0.89
GPR35-205ENST00000438013 MYT1Q01538 1121 aa20.55■□□□□ 0.88
GPR35-205ENST00000438013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.5■□□□□ 0.87
GPR35-205ENST00000438013 TRIM41Q8WV44 630 aa20.48■□□□□ 0.87
GPR35-205ENST00000438013 SCRIBQ14160 1630 aa20.45■□□□□ 0.86
GPR35-205ENST00000438013 NEUROD1Q13562 356 aa20.34■□□□□ 0.85
GPR35-205ENST00000438013 ACIN1Q9UKV3 1341 aaKnown RBP20.33■□□□□ 0.85
GPR35-205ENST00000438013 DIEXFQ68CQ4 756 aaKnown RBP20.33■□□□□ 0.84
GPR35-205ENST00000438013 RSF1Q96T23 1441 aaPredicted RBP20.22■□□□□ 0.83
GPR35-205ENST00000438013 RANGAP1P46060 587 aaPredicted RBP20.13■□□□□ 0.81
GPR35-205ENST00000438013 CECR2Q9BXF3 1484 aa20.1■□□□□ 0.81
GPR35-205ENST00000438013 RB1CC1Q8TDY2 1594 aa20.08■□□□□ 0.8
GPR35-205ENST00000438013 NACADO15069 1562 aa20.01■□□□□ 0.79
GPR35-205ENST00000438013 PABPN1Q86U42 306 aaKnown RBP eCLIP19.96■□□□□ 0.799e-7■■■□□ 16.2
GPR35-205ENST00000438013 MROH2BQ7Z745 1585 aa19.94■□□□□ 0.78
GPR35-205ENST00000438013 HNRNPUL2Q1KMD3 747 aaKnown RBP19.92■□□□□ 0.78
GPR35-205ENST00000438013 BCANQ96GW7 911 aa19.86■□□□□ 0.77
GPR35-205ENST00000438013 WIZO95785 1651 aa19.86■□□□□ 0.77
GPR35-205ENST00000438013 UBTFP17480 764 aaKnown RBP19.85■□□□□ 0.77
GPR35-205ENST00000438013 APLP2Q06481 763 aa19.84■□□□□ 0.77
GPR35-205ENST00000438013 ERICH6Q7L0X2 663 aa19.8■□□□□ 0.76
GPR35-205ENST00000438013 ZNF316A6NFI3 1004 aaPredicted RBP19.69■□□□□ 0.74
GPR35-205ENST00000438013 MIER1Q8N108 512 aa19.62■□□□□ 0.73
GPR35-205ENST00000438013 NEFLP07196 543 aa19.6■□□□□ 0.73
GPR35-205ENST00000438013 UNC13AQ9UPW8 1703 aa19.56■□□□□ 0.72
GPR35-205ENST00000438013 ITGAEP38570 1179 aa19.54■□□□□ 0.72
GPR35-205ENST00000438013 BAZ1AQ9NRL2 1556 aaPredicted RBP19.48■□□□□ 0.71
GPR35-205ENST00000438013 ABCC8Q09428 1581 aa19.47■□□□□ 0.71
GPR35-205ENST00000438013 EIF4G1Q04637 1599 aaKnown RBP19.42■□□□□ 0.7
GPR35-205ENST00000438013 CCDC88BA6NC98 1476 aa19.39■□□□□ 0.69
GPR35-205ENST00000438013 SMARCA4P51532 1647 aa19.38■□□□□ 0.69
GPR35-205ENST00000438013 BCL11AQ9H165 835 aa19.37■□□□□ 0.69
GPR35-205ENST00000438013 SMARCA2P51531 1590 aa19.3■□□□□ 0.68
GPR35-205ENST00000438013 TOP2AP11388 1531 aaKnown RBP19.29■□□□□ 0.68
GPR35-205ENST00000438013 BICRAQ9NZM4 1560 aa19.29■□□□□ 0.68
GPR35-205ENST00000438013 FKBP8Q14318 412 aa19.28■□□□□ 0.68
GPR35-205ENST00000438013 CNGB1Q14028 1251 aaPredicted RBP19.27■□□□□ 0.68
GPR35-205ENST00000438013 SOGA1O94964 1423 aa19.27■□□□□ 0.67
GPR35-205ENST00000438013 RUSC2Q8N2Y8 1516 aa19.27■□□□□ 0.67
GPR35-205ENST00000438013 ATP1B4Q9UN42 357 aaPredicted RBP19.26■□□□□ 0.67
GPR35-205ENST00000438013 ANP32EQ9BTT0 268 aa19.24■□□□□ 0.67
GPR35-205ENST00000438013 SUPT16HQ9Y5B9 1047 aaKnown RBP19.15■□□□□ 0.66
GPR35-205ENST00000438013 CSRNP3Q8WYN3 585 aa19.13■□□□□ 0.65
GPR35-205ENST00000438013 TRIM52Q96A61 297 aa19.08■□□□□ 0.64
GPR35-205ENST00000438013 IRX6P78412 446 aaPredicted RBP19.04■□□□□ 0.64
GPR35-205ENST00000438013 BAZ1BQ9UIG0 1483 aaKnown RBP19.03■□□□□ 0.64
GPR35-205ENST00000438013 TSHZ2Q9NRE2 1034 aa19.01■□□□□ 0.63
GPR35-205ENST00000438013 HIRIP3Q9BW71 556 aaPredicted RBP19■□□□□ 0.63
GPR35-205ENST00000438013 CEP162Q5TB80 1403 aa19■□□□□ 0.63
GPR35-205ENST00000438013 DDX10Q13206 875 aaKnown RBP18.99■□□□□ 0.63
GPR35-205ENST00000438013 SYNJ1O43426 1573 aa18.95■□□□□ 0.62
GPR35-205ENST00000438013 PRKCSHP14314 528 aaPredicted RBP18.94■□□□□ 0.62
GPR35-205ENST00000438013 NBR1Q14596 966 aa18.94■□□□□ 0.62
GPR35-205ENST00000438013 CDK11AQ9UQ88 783 aaPredicted RBP18.94■□□□□ 0.62
GPR35-205ENST00000438013 ATAD2BQ9ULI0 1458 aa18.93■□□□□ 0.62
GPR35-205ENST00000438013 WRNQ14191 1432 aaPredicted RBP eCLIP18.92■□□□□ 0.62
GPR35-205ENST00000438013 POLR3GLQ9BT43 218 aa18.91■□□□□ 0.62
GPR35-205ENST00000438013 PEG3Q9GZU2 1588 aa18.87■□□□□ 0.61
GPR35-205ENST00000438013 RTL5Q5HYW3 569 aaPredicted RBP18.87■□□□□ 0.61
GPR35-205ENST00000438013 TNIKQ9UKE5 1360 aa18.85■□□□□ 0.61
GPR35-205ENST00000438013 ANP32CO43423 234 aa18.82■□□□□ 0.6
GPR35-205ENST00000438013 KCNH8Q96L42 1107 aa18.81■□□□□ 0.6
GPR35-205ENST00000438013 RBM19Q9Y4C8 960 aaKnown RBP18.8■□□□□ 0.6
GPR35-205ENST00000438013 FAM50AQ14320 339 aaKnown RBP18.78■□□□□ 0.6
GPR35-205ENST00000438013 CLSPNQ9HAW4 1339 aa18.75■□□□□ 0.59
GPR35-205ENST00000438013 HNRNPUQ00839 825 aaKnown RBP eCLIP18.74■□□□□ 0.59
GPR35-205ENST00000438013 RAPGEF2Q9Y4G8 1499 aa18.73■□□□□ 0.59
GPR35-205ENST00000438013 RTN4Q9NQC3 1192 aaKnown RBP18.73■□□□□ 0.59
GPR35-205ENST00000438013 GOLGA3Q08378 1498 aa18.73■□□□□ 0.59
GPR35-205ENST00000438013 SENP3-EIF4A1A0A087X0R7 540 aa18.72■□□□□ 0.59
GPR35-205ENST00000438013 EIF5BO60841 1220 aaKnown RBP18.71■□□□□ 0.59
GPR35-205ENST00000438013 NPM2Q86SE8 214 aaKnown RBP18.7■□□□□ 0.58
GPR35-205ENST00000438013 EEA1Q15075 1411 aa18.66■□□□□ 0.58
GPR35-205ENST00000438013 CLIP1P30622 1438 aa18.61■□□□□ 0.57
GPR35-205ENST00000438013 CEP164Q9UPV0 1460 aa18.6■□□□□ 0.57
GPR35-205ENST00000438013 FAM9BQ8IZU0 186 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms