RNA–Protein interactions for RNA: ENST00000380041.7

SCML1-201, Transcript of Scm polycomb group protein like 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCML1, Length 1,997 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML1-201ENST00000380041 NISCHQ9Y2I1 1504 aa28.51■■■□□ 2.16
SCML1-201ENST00000380041 CCDC180Q9P1Z9 1646 aa24.67■■□□□ 1.54
SCML1-201ENST00000380041 ZCCHC6Q5VYS8 1495 aaKnown RBP24.01■■□□□ 1.43
SCML1-201ENST00000380041 SHROOM4Q9ULL8 1493 aa23.57■■□□□ 1.36
SCML1-201ENST00000380041 DCAF1Q9Y4B6 1507 aa23.55■■□□□ 1.36
SCML1-201ENST00000380041 DCAF8L2P0C7V8 631 aa23.48■■□□□ 1.35
SCML1-201ENST00000380041 MYO15BQ96JP2 1530 aa23.13■■□□□ 1.29
SCML1-201ENST00000380041 ABCC9O60706 1549 aa23.01■■□□□ 1.27
SCML1-201ENST00000380041 NACADO15069 1562 aa22.89■■□□□ 1.25
SCML1-201ENST00000380041 SUPT5HO00267 1087 aaKnown RBP22.88■■□□□ 1.25
SCML1-201ENST00000380041 SCRIBQ14160 1630 aa22.76■■□□□ 1.23
SCML1-201ENST00000380041 RB1CC1Q8TDY2 1594 aa22.6■■□□□ 1.21
SCML1-201ENST00000380041 RSF1Q96T23 1441 aaPredicted RBP22.28■■□□□ 1.16
SCML1-201ENST00000380041 UNC13AQ9UPW8 1703 aa22.22■■□□□ 1.15
SCML1-201ENST00000380041 CECR2Q9BXF3 1484 aa22.14■■□□□ 1.14
SCML1-201ENST00000380041 CHIC1Q5VXU3 224 aa22.1■■□□□ 1.13
SCML1-201ENST00000380041 MROH2BQ7Z745 1585 aa22.05■■□□□ 1.12
SCML1-201ENST00000380041 BAZ1AQ9NRL2 1556 aaPredicted RBP21.98■■□□□ 1.11
SCML1-201ENST00000380041 BICRAQ9NZM4 1560 aa21.93■■□□□ 1.1
SCML1-201ENST00000380041 WIZO95785 1651 aa21.91■■□□□ 1.1
SCML1-201ENST00000380041 SMARCA4P51532 1647 aa21.84■■□□□ 1.09
SCML1-201ENST00000380041 PABPN1Q86U42 306 aaKnown RBP eCLIP21.81■■□□□ 1.08
SCML1-201ENST00000380041 TOP2AP11388 1531 aaKnown RBP21.65■■□□□ 1.06
SCML1-201ENST00000380041 PEG3Q9GZU2 1588 aa21.54■■□□□ 1.04
SCML1-201ENST00000380041 SMARCA2P51531 1590 aa21.48■■□□□ 1.03
SCML1-201ENST00000380041 TRIM41Q8WV44 630 aa21.47■■□□□ 1.03
SCML1-201ENST00000380041 CCDC88BA6NC98 1476 aa21.47■■□□□ 1.03
SCML1-201ENST00000380041 EIF4G1Q04637 1599 aaKnown RBP21.45■■□□□ 1.02
SCML1-201ENST00000380041 ATAD2BQ9ULI0 1458 aa21.38■■□□□ 1.01
SCML1-201ENST00000380041 LOC105371045A0A1W2PR82 267 aa21.29■■□□□ 1
SCML1-201ENST00000380041 BAZ1BQ9UIG0 1483 aaKnown RBP21.28■■□□□ 1
SCML1-201ENST00000380041 ABCC8Q09428 1581 aa21.14■□□□□ 0.98
SCML1-201ENST00000380041 NCAPD3P42695 1498 aa21.13■□□□□ 0.97
SCML1-201ENST00000380041 HMGXB3Q12766 1538 aa21.12■□□□□ 0.97
SCML1-201ENST00000380041 FAM9AQ8IZU1 332 aaPredicted RBP21.1■□□□□ 0.97
SCML1-201ENST00000380041 WRNQ14191 1432 aaPredicted RBP eCLIP20.95■□□□□ 0.94
SCML1-201ENST00000380041 SYNJ1O43426 1573 aa20.86■□□□□ 0.93
SCML1-201ENST00000380041 EEA1Q15075 1411 aa20.84■□□□□ 0.93
SCML1-201ENST00000380041 SOGA1O94964 1423 aa20.83■□□□□ 0.93
SCML1-201ENST00000380041 CC2D2AQ9P2K1 1620 aa20.83■□□□□ 0.93
SCML1-201ENST00000380041 EHMT2Q96KQ7 1210 aa20.8■□□□□ 0.92
SCML1-201ENST00000380041 CFTRP13569 1480 aa20.77■□□□□ 0.92
SCML1-201ENST00000380041 TOP2BQ02880 1626 aa20.74■□□□□ 0.91
SCML1-201ENST00000380041 RUSC2Q8N2Y8 1516 aa20.74■□□□□ 0.91
SCML1-201ENST00000380041 CSRNP3Q8WYN3 585 aa20.73■□□□□ 0.91
SCML1-201ENST00000380041 PCGF6Q9BYE7 350 aa20.72■□□□□ 0.91
SCML1-201ENST00000380041 BIVM-ERCC5R4GMW8 1640 aa20.71■□□□□ 0.91
SCML1-201ENST00000380041 PRDM2Q13029 1718 aa20.7■□□□□ 0.9
SCML1-201ENST00000380041 CADPSQ9ULU8 1353 aa20.62■□□□□ 0.89
SCML1-201ENST00000380041 TRIM26Q12899 539 aaPredicted RBP20.61■□□□□ 0.89
SCML1-201ENST00000380041 TNIKQ9UKE5 1360 aa20.6■□□□□ 0.89
SCML1-201ENST00000380041 CUX1P39880 1505 aa20.59■□□□□ 0.89
SCML1-201ENST00000380041 GOLGA3Q08378 1498 aa20.57■□□□□ 0.88
SCML1-201ENST00000380041 KIF21BO75037 1637 aa20.56■□□□□ 0.88
SCML1-201ENST00000380041 CEP164Q9UPV0 1460 aa20.54■□□□□ 0.88
SCML1-201ENST00000380041 CEP162Q5TB80 1403 aa20.52■□□□□ 0.87
SCML1-201ENST00000380041 UBTFP17480 764 aaKnown RBP20.5■□□□□ 0.87
SCML1-201ENST00000380041 HRCP23327 699 aa20.42■□□□□ 0.86
SCML1-201ENST00000380041 FANCD2Q9BXW9 1451 aa20.4■□□□□ 0.86
SCML1-201ENST00000380041 RAPGEF2Q9Y4G8 1499 aa20.39■□□□□ 0.85
SCML1-201ENST00000380041 KIF27Q86VH2 1401 aa20.38■□□□□ 0.85
SCML1-201ENST00000380041 PRXQ9BXM0 1461 aa20.35■□□□□ 0.85
SCML1-201ENST00000380041 LAMC3Q9Y6N6 1575 aa20.35■□□□□ 0.85
SCML1-201ENST00000380041 ERICH3Q5RHP9 1530 aa20.34■□□□□ 0.85
SCML1-201ENST00000380041 NESP48681 1621 aa20.34■□□□□ 0.85
SCML1-201ENST00000380041 FGD5Q6ZNL6 1462 aa20.3■□□□□ 0.84
SCML1-201ENST00000380041 DNMBPQ6XZF7 1577 aa20.28■□□□□ 0.84
SCML1-201ENST00000380041 CLIP1P30622 1438 aa20.27■□□□□ 0.84
SCML1-201ENST00000380041 PPARGC1BQ86YN6 1023 aaKnown RBP20.26■□□□□ 0.83
SCML1-201ENST00000380041 CUX2O14529 1486 aa20.25■□□□□ 0.83
SCML1-201ENST00000380041 DNAJC5BQ9UF47 199 aa20.23■□□□□ 0.83
SCML1-201ENST00000380041 TOPBP1Q92547 1522 aa20.22■□□□□ 0.83
SCML1-201ENST00000380041 IGF1RP08069 1367 aa20.19■□□□□ 0.82
SCML1-201ENST00000380041 PDS5BQ9NTI5 1447 aa20.18■□□□□ 0.82
SCML1-201ENST00000380041 POLA1P09884 1462 aaPredicted RBP20.15■□□□□ 0.82
SCML1-201ENST00000380041 VPS8Q8N3P4 1428 aa20.15■□□□□ 0.82
SCML1-201ENST00000380041 ABCA10Q8WWZ4 1543 aa20.13■□□□□ 0.81
SCML1-201ENST00000380041 URB2Q14146 1524 aaKnown RBP20.12■□□□□ 0.81
SCML1-201ENST00000380041 RAD54L2Q9Y4B4 1467 aa20.1■□□□□ 0.81
SCML1-201ENST00000380041 KIF21AQ7Z4S6 1674 aa20.09■□□□□ 0.81
SCML1-201ENST00000380041 CARMIL1Q5VZK9 1371 aa20.08■□□□□ 0.81
SCML1-201ENST00000380041 RANGAP1P46060 587 aaPredicted RBP20.06■□□□□ 0.8
SCML1-201ENST00000380041 WDR97A6NE52 1622 aa20.03■□□□□ 0.8
SCML1-201ENST00000380041 ARAP1Q96P48 1450 aa20.02■□□□□ 0.8
SCML1-201ENST00000380041 TTBK1Q5TCY1 1321 aaPredicted RBP20■□□□□ 0.79
SCML1-201ENST00000380041 ZEB1P37275 1124 aaPredicted RBP19.97■□□□□ 0.79
SCML1-201ENST00000380041 APLP2Q06481 763 aa19.97■□□□□ 0.79
SCML1-201ENST00000380041 CUL7Q14999 1698 aa19.97■□□□□ 0.79
SCML1-201ENST00000380041 ARHGAP35Q9NRY4 1499 aa19.95■□□□□ 0.78
SCML1-201ENST00000380041 ABCA5Q8WWZ7 1642 aa19.94■□□□□ 0.78
SCML1-201ENST00000380041 TARBP1Q13395 1621 aaKnown RBP19.9■□□□□ 0.78
SCML1-201ENST00000380041 MRC2Q9UBG0 1479 aa19.89■□□□□ 0.77
SCML1-201ENST00000380041 GAPVD1Q14C86 1478 aa19.88■□□□□ 0.77
SCML1-201ENST00000380041 TDRD9Q8NDG6 1382 aaKnown RBP19.88■□□□□ 0.77
SCML1-201ENST00000380041 CTTNBP2Q8WZ74 1663 aa19.82■□□□□ 0.76
SCML1-201ENST00000380041 WDR62O43379 1518 aa19.77■□□□□ 0.76
SCML1-201ENST00000380041 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.76■□□□□ 0.75
SCML1-201ENST00000380041 EFCAB5A4FU69 1503 aa19.75■□□□□ 0.75
SCML1-201ENST00000380041 PBRM1Q86U86 1689 aa19.74■□□□□ 0.75
SCML1-201ENST00000380041 KANK4Q5T7N3 995 aaPredicted RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms