RNA–Protein interactions for RNA: ENST00000551406.5

PPHLN1-216, Transcript of periphilin 1, humanhuman

TSL 2

Gene PPHLN1, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPHLN1-216ENST00000551406 NISCHQ9Y2I1 1504 aa30.51■■■□□ 2.47
PPHLN1-216ENST00000551406 CCDC180Q9P1Z9 1646 aa27.07■■□□□ 1.92
PPHLN1-216ENST00000551406 ABCC9O60706 1549 aa26.53■■□□□ 1.84
PPHLN1-216ENST00000551406 RB1CC1Q8TDY2 1594 aa25.48■■□□□ 1.67
PPHLN1-216ENST00000551406 NACADO15069 1562 aa25.47■■□□□ 1.67
PPHLN1-216ENST00000551406 DCAF8L2P0C7V8 631 aa25.46■■□□□ 1.67
PPHLN1-216ENST00000551406 AEBP2Q6ZN18 517 aaPredicted RBP25.44■■□□□ 1.66
PPHLN1-216ENST00000551406 ZCCHC6Q5VYS8 1495 aaKnown RBP25.42■■□□□ 1.66
PPHLN1-216ENST00000551406 MYO15BQ96JP2 1530 aa25.33■■□□□ 1.65
PPHLN1-216ENST00000551406 DCAF1Q9Y4B6 1507 aa25.23■■□□□ 1.63
PPHLN1-216ENST00000551406 UNC13AQ9UPW8 1703 aa24.91■■□□□ 1.58
PPHLN1-216ENST00000551406 PABPN1Q86U42 306 aaKnown RBP eCLIP24.81■■□□□ 1.56
PPHLN1-216ENST00000551406 BICRAQ9NZM4 1560 aa24.77■■□□□ 1.56
PPHLN1-216ENST00000551406 SCRIBQ14160 1630 aa24.74■■□□□ 1.55
PPHLN1-216ENST00000551406 SHROOM4Q9ULL8 1493 aa24.45■■□□□ 1.51
PPHLN1-216ENST00000551406 DNAJC5BQ9UF47 199 aa24.4■■□□□ 1.5
PPHLN1-216ENST00000551406 EIF4G1Q04637 1599 aaKnown RBP24.09■■□□□ 1.45
PPHLN1-216ENST00000551406 CC2D2AQ9P2K1 1620 aa23.99■■□□□ 1.43
PPHLN1-216ENST00000551406 CECR2Q9BXF3 1484 aa23.82■■□□□ 1.4
PPHLN1-216ENST00000551406 SMARCA4P51532 1647 aa23.66■■□□□ 1.38
PPHLN1-216ENST00000551406 BAZ1AQ9NRL2 1556 aaPredicted RBP23.62■■□□□ 1.37
PPHLN1-216ENST00000551406 CHIC1Q5VXU3 224 aa23.6■■□□□ 1.37
PPHLN1-216ENST00000551406 ATAD2BQ9ULI0 1458 aa23.55■■□□□ 1.36
PPHLN1-216ENST00000551406 MROH2BQ7Z745 1585 aa23.53■■□□□ 1.36
PPHLN1-216ENST00000551406 NCAPD3P42695 1498 aa23.53■■□□□ 1.36
PPHLN1-216ENST00000551406 SMARCA2P51531 1590 aa23.48■■□□□ 1.35
PPHLN1-216ENST00000551406 PEG3Q9GZU2 1588 aa23.44■■□□□ 1.34
PPHLN1-216ENST00000551406 HMGXB3Q12766 1538 aa23.4■■□□□ 1.34
PPHLN1-216ENST00000551406 BAZ1BQ9UIG0 1483 aaKnown RBP23.33■■□□□ 1.33
PPHLN1-216ENST00000551406 RSF1Q96T23 1441 aaPredicted RBP23.27■■□□□ 1.32
PPHLN1-216ENST00000551406 WIZO95785 1651 aa23.25■■□□□ 1.31
PPHLN1-216ENST00000551406 TOP2AP11388 1531 aaKnown RBP23■■□□□ 1.27
PPHLN1-216ENST00000551406 NESP48681 1621 aa22.98■■□□□ 1.27
PPHLN1-216ENST00000551406 LAMC3Q9Y6N6 1575 aa22.87■■□□□ 1.25
PPHLN1-216ENST00000551406 CADPSQ9ULU8 1353 aa22.84■■□□□ 1.25
PPHLN1-216ENST00000551406 ERCC6Q03468 1493 aa22.83■■□□□ 1.25
PPHLN1-216ENST00000551406 CCDC88BA6NC98 1476 aa22.76■■□□□ 1.23
PPHLN1-216ENST00000551406 PDS5BQ9NTI5 1447 aa22.72■■□□□ 1.23
PPHLN1-216ENST00000551406 CFTRP13569 1480 aa22.72■■□□□ 1.23
PPHLN1-216ENST00000551406 KIF21AQ7Z4S6 1674 aa22.67■■□□□ 1.22
PPHLN1-216ENST00000551406 SUPT5HO00267 1087 aaKnown RBP22.66■■□□□ 1.22
PPHLN1-216ENST00000551406 THOC2Q8NI27 1593 aaKnown RBP22.6■■□□□ 1.21
PPHLN1-216ENST00000551406 CUX2O14529 1486 aa22.6■■□□□ 1.21
PPHLN1-216ENST00000551406 FANCD2Q9BXW9 1451 aa22.58■■□□□ 1.2
PPHLN1-216ENST00000551406 CEP164Q9UPV0 1460 aa22.53■■□□□ 1.2
PPHLN1-216ENST00000551406 MRC2Q9UBG0 1479 aa22.5■■□□□ 1.19
PPHLN1-216ENST00000551406 PRDM2Q13029 1718 aa22.47■■□□□ 1.19
PPHLN1-216ENST00000551406 WDR62O43379 1518 aa22.43■■□□□ 1.18
PPHLN1-216ENST00000551406 URB2Q14146 1524 aaKnown RBP22.37■■□□□ 1.17
PPHLN1-216ENST00000551406 TOPBP1Q92547 1522 aa22.21■■□□□ 1.15
PPHLN1-216ENST00000551406 ABCC8Q09428 1581 aa22.17■■□□□ 1.14
PPHLN1-216ENST00000551406 DNMBPQ6XZF7 1577 aa22.17■■□□□ 1.14
PPHLN1-216ENST00000551406 CUX1P39880 1505 aa22.07■■□□□ 1.12
PPHLN1-216ENST00000551406 IFT140Q96RY7 1462 aa22.06■■□□□ 1.12
PPHLN1-216ENST00000551406 POLA1P09884 1462 aaPredicted RBP22.03■■□□□ 1.12
PPHLN1-216ENST00000551406 ZNF608Q9ULD9 1512 aaPredicted RBP22■■□□□ 1.11
PPHLN1-216ENST00000551406 TARBP1Q13395 1621 aaKnown RBP21.98■■□□□ 1.11
PPHLN1-216ENST00000551406 FGD5Q6ZNL6 1462 aa21.98■■□□□ 1.11
PPHLN1-216ENST00000551406 RAD54L2Q9Y4B4 1467 aa21.96■■□□□ 1.11
PPHLN1-216ENST00000551406 SOGA1O94964 1423 aa21.93■■□□□ 1.1
PPHLN1-216ENST00000551406 WRNQ14191 1432 aaPredicted RBP eCLIP21.91■■□□□ 1.1
PPHLN1-216ENST00000551406 DNAJC5Q9H3Z4 198 aa21.91■■□□□ 1.1
PPHLN1-216ENST00000551406 SYNJ1O43426 1573 aa21.88■■□□□ 1.09
PPHLN1-216ENST00000551406 EIF4G3O43432 1585 aaKnown RBP21.88■■□□□ 1.09
PPHLN1-216ENST00000551406 AQRO60306 1485 aaKnown RBP eCLIP21.87■■□□□ 1.09
PPHLN1-216ENST00000551406 TOP2BQ02880 1626 aa21.86■■□□□ 1.09
PPHLN1-216ENST00000551406 BIVM-ERCC5R4GMW8 1640 aa21.84■■□□□ 1.09
PPHLN1-216ENST00000551406 TDRD9Q8NDG6 1382 aaKnown RBP21.83■■□□□ 1.08
PPHLN1-216ENST00000551406 WDR97A6NE52 1622 aa21.78■■□□□ 1.08
PPHLN1-216ENST00000551406 ABCA10Q8WWZ4 1543 aa21.77■■□□□ 1.08
PPHLN1-216ENST00000551406 SENP3Q9H4L4 574 aaPredicted RBP21.7■■□□□ 1.06
PPHLN1-216ENST00000551406 GAPVD1Q14C86 1478 aa21.68■■□□□ 1.06
PPHLN1-216ENST00000551406 ABCA5Q8WWZ7 1642 aa21.67■■□□□ 1.06
PPHLN1-216ENST00000551406 GRIN2BQ13224 1484 aa21.67■■□□□ 1.06
PPHLN1-216ENST00000551406 OSCARQ8IYS5 282 aa21.66■■□□□ 1.06
PPHLN1-216ENST00000551406 SNAPC4Q5SXM2 1469 aa21.64■■□□□ 1.06
PPHLN1-216ENST00000551406 MAGI1Q96QZ7 1491 aaPredicted RBP21.61■■□□□ 1.05
PPHLN1-216ENST00000551406 PBRM1Q86U86 1689 aa21.6■■□□□ 1.05
PPHLN1-216ENST00000551406 CHD1O14646 1710 aa21.58■■□□□ 1.05
PPHLN1-216ENST00000551406 FBLN2P98095 1184 aa21.57■■□□□ 1.04
PPHLN1-216ENST00000551406 SYNJ2O15056 1496 aa21.53■■□□□ 1.04
PPHLN1-216ENST00000551406 CHMP7Q8WUX9 453 aaPredicted RBP21.51■■□□□ 1.03
PPHLN1-216ENST00000551406 ERICH3Q5RHP9 1530 aa21.5■■□□□ 1.03
PPHLN1-216ENST00000551406 ADAMTS12P58397 1594 aa21.46■■□□□ 1.03
PPHLN1-216ENST00000551406 KIF27Q86VH2 1401 aa21.44■■□□□ 1.02
PPHLN1-216ENST00000551406 FHAD1B1AJZ9 1412 aa21.43■■□□□ 1.02
PPHLN1-216ENST00000551406 GRIN2AQ12879 1464 aa21.4■■□□□ 1.02
PPHLN1-216ENST00000551406 IGF1RP08069 1367 aa21.39■■□□□ 1.02
PPHLN1-216ENST00000551406 TRIM41Q8WV44 630 aa21.39■■□□□ 1.01
PPHLN1-216ENST00000551406 CLASP1Q7Z460 1538 aa21.39■■□□□ 1.01
PPHLN1-216ENST00000551406 PHF23Q9BUL5 403 aaPredicted RBP21.36■■□□□ 1.01
PPHLN1-216ENST00000551406 ARHGEF11O15085 1522 aa21.33■■□□□ 1
PPHLN1-216ENST00000551406 NUP160Q12769 1436 aa21.32■■□□□ 1
PPHLN1-216ENST00000551406 RIMBP3CA6NJZ7 1639 aa21.32■■□□□ 1
PPHLN1-216ENST00000551406 RIMBP3BA6NNM3 1639 aa21.32■■□□□ 1
PPHLN1-216ENST00000551406 RIMBP3Q9UFD9 1639 aa21.32■■□□□ 1
PPHLN1-216ENST00000551406 CEP170Q5SW79 1584 aa21.31■■□□□ 1
PPHLN1-216ENST00000551406 RUSC2Q8N2Y8 1516 aa21.3■■□□□ 1
PPHLN1-216ENST00000551406 CUL7Q14999 1698 aa21.28■■□□□ 1
PPHLN1-216ENST00000551406 CARMIL1Q5VZK9 1371 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms