RNA–Protein interactions for RNA: ENST00000639419.1

TUBA1C-210, Transcript of tubulin alpha 1c, humanhuman

TSL 5 BASIC

Gene TUBA1C, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-210ENST00000639419 NISCHQ9Y2I1 1504 aa22.89■■□□□ 1.26
TUBA1C-210ENST00000639419 ABCC9O60706 1549 aa20.56■□□□□ 0.88
TUBA1C-210ENST00000639419 CCDC180Q9P1Z9 1646 aa20.53■□□□□ 0.88
TUBA1C-210ENST00000639419 RB1CC1Q8TDY2 1594 aa19.5■□□□□ 0.71
TUBA1C-210ENST00000639419 DCAF8L2P0C7V8 631 aa19.38■□□□□ 0.69
TUBA1C-210ENST00000639419 NACADO15069 1562 aa19.35■□□□□ 0.69
TUBA1C-210ENST00000639419 DNAJC5BQ9UF47 199 aa19.26■□□□□ 0.67
TUBA1C-210ENST00000639419 UNC13AQ9UPW8 1703 aa19.23■□□□□ 0.67
TUBA1C-210ENST00000639419 PABPN1Q86U42 306 aaKnown RBP eCLIP19.16■□□□□ 0.66
TUBA1C-210ENST00000639419 MYO15BQ96JP2 1530 aa19.02■□□□□ 0.64
TUBA1C-210ENST00000639419 BICRAQ9NZM4 1560 aa19.01■□□□□ 0.63
TUBA1C-210ENST00000639419 ZCCHC6Q5VYS8 1495 aaKnown RBP18.98■□□□□ 0.63
TUBA1C-210ENST00000639419 DCAF1Q9Y4B6 1507 aa18.83■□□□□ 0.6
TUBA1C-210ENST00000639419 SCRIBQ14160 1630 aa18.82■□□□□ 0.6
TUBA1C-210ENST00000639419 CC2D2AQ9P2K1 1620 aa18.56■□□□□ 0.56
TUBA1C-210ENST00000639419 SHROOM4Q9ULL8 1493 aa18.56■□□□□ 0.56
TUBA1C-210ENST00000639419 EIF4G1Q04637 1599 aaKnown RBP18.51■□□□□ 0.55
TUBA1C-210ENST00000639419 CECR2Q9BXF3 1484 aa18.46■□□□□ 0.54
TUBA1C-210ENST00000639419 SMARCA4P51532 1647 aa17.89■□□□□ 0.45
TUBA1C-210ENST00000639419 NCAPD3P42695 1498 aa17.85■□□□□ 0.45
TUBA1C-210ENST00000639419 ATAD2BQ9ULI0 1458 aa17.85■□□□□ 0.45
TUBA1C-210ENST00000639419 SMARCA2P51531 1590 aa17.77■□□□□ 0.44
TUBA1C-210ENST00000639419 BAZ1AQ9NRL2 1556 aaPredicted RBP17.74■□□□□ 0.43
TUBA1C-210ENST00000639419 HMGXB3Q12766 1538 aa17.74■□□□□ 0.43
TUBA1C-210ENST00000639419 MROH2BQ7Z745 1585 aa17.7■□□□□ 0.42
TUBA1C-210ENST00000639419 NESP48681 1621 aa17.7■□□□□ 0.42
TUBA1C-210ENST00000639419 ERCC6Q03468 1493 aa17.69■□□□□ 0.42
TUBA1C-210ENST00000639419 BAZ1BQ9UIG0 1483 aaKnown RBP17.69■□□□□ 0.42
TUBA1C-210ENST00000639419 DNAJC5Q9H3Z4 198 aa17.64■□□□□ 0.41
TUBA1C-210ENST00000639419 PEG3Q9GZU2 1588 aa17.64■□□□□ 0.41
TUBA1C-210ENST00000639419 CUX2O14529 1486 aa17.59■□□□□ 0.41
TUBA1C-210ENST00000639419 WIZO95785 1651 aa17.55■□□□□ 0.4
TUBA1C-210ENST00000639419 KIF21AQ7Z4S6 1674 aa17.51■□□□□ 0.39
TUBA1C-210ENST00000639419 THOC2Q8NI27 1593 aaKnown RBP17.48■□□□□ 0.39
TUBA1C-210ENST00000639419 LAMC3Q9Y6N6 1575 aa17.47■□□□□ 0.39
TUBA1C-210ENST00000639419 PDS5BQ9NTI5 1447 aa17.33■□□□□ 0.36
TUBA1C-210ENST00000639419 CADPSQ9ULU8 1353 aa17.32■□□□□ 0.36
TUBA1C-210ENST00000639419 RSF1Q96T23 1441 aaPredicted RBP17.3■□□□□ 0.36
TUBA1C-210ENST00000639419 TOP2AP11388 1531 aaKnown RBP17.23■□□□□ 0.35
TUBA1C-210ENST00000639419 MRC2Q9UBG0 1479 aa17.23■□□□□ 0.35
TUBA1C-210ENST00000639419 WDR62O43379 1518 aa17.19■□□□□ 0.34
TUBA1C-210ENST00000639419 CEP164Q9UPV0 1460 aa17.18■□□□□ 0.34
TUBA1C-210ENST00000639419 FANCD2Q9BXW9 1451 aa17.17■□□□□ 0.34
TUBA1C-210ENST00000639419 CFTRP13569 1480 aa17.14■□□□□ 0.33
TUBA1C-210ENST00000639419 PRDM2Q13029 1718 aa17.09■□□□□ 0.33
TUBA1C-210ENST00000639419 URB2Q14146 1524 aaKnown RBP17.06■□□□□ 0.32
TUBA1C-210ENST00000639419 CCDC88BA6NC98 1476 aa17.05■□□□□ 0.32
TUBA1C-210ENST00000639419 TRIM41Q8WV44 630 aa16.9■□□□□ 0.3
TUBA1C-210ENST00000639419 ZNF608Q9ULD9 1512 aaPredicted RBP16.87■□□□□ 0.29
TUBA1C-210ENST00000639419 TOPBP1Q92547 1522 aa16.86■□□□□ 0.29
TUBA1C-210ENST00000639419 DNMBPQ6XZF7 1577 aa16.8■□□□□ 0.28
TUBA1C-210ENST00000639419 IFT140Q96RY7 1462 aa16.8■□□□□ 0.28
TUBA1C-210ENST00000639419 OSCARQ8IYS5 282 aa16.79■□□□□ 0.28
TUBA1C-210ENST00000639419 EIF4G3O43432 1585 aaKnown RBP16.77■□□□□ 0.28
TUBA1C-210ENST00000639419 SUPT5HO00267 1087 aaKnown RBP16.76■□□□□ 0.27
TUBA1C-210ENST00000639419 TARBP1Q13395 1621 aaKnown RBP16.73■□□□□ 0.27
TUBA1C-210ENST00000639419 ABCC8Q09428 1581 aa16.72■□□□□ 0.27
TUBA1C-210ENST00000639419 CHD1O14646 1710 aa16.7■□□□□ 0.26
TUBA1C-210ENST00000639419 AQRO60306 1485 aaKnown RBP eCLIP16.7■□□□□ 0.266e-11■■■□□ 19.2
TUBA1C-210ENST00000639419 POLA1P09884 1462 aaPredicted RBP16.69■□□□□ 0.26
TUBA1C-210ENST00000639419 RIMBP3CA6NJZ7 1639 aa16.69■□□□□ 0.26
TUBA1C-210ENST00000639419 RIMBP3BA6NNM3 1639 aa16.69■□□□□ 0.26
TUBA1C-210ENST00000639419 RIMBP3Q9UFD9 1639 aa16.69■□□□□ 0.26
TUBA1C-210ENST00000639419 RAD54L2Q9Y4B4 1467 aa16.68■□□□□ 0.26
TUBA1C-210ENST00000639419 CUX1P39880 1505 aa16.62■□□□□ 0.25
TUBA1C-210ENST00000639419 FGD5Q6ZNL6 1462 aa16.61■□□□□ 0.25
TUBA1C-210ENST00000639419 TDRD9Q8NDG6 1382 aaKnown RBP16.61■□□□□ 0.25
TUBA1C-210ENST00000639419 SOGA1O94964 1423 aa16.6■□□□□ 0.25
TUBA1C-210ENST00000639419 ARHGEF11O15085 1522 aa16.59■□□□□ 0.25
TUBA1C-210ENST00000639419 FBLN2P98095 1184 aa16.58■□□□□ 0.24
TUBA1C-210ENST00000639419 WDR97A6NE52 1622 aa16.53■□□□□ 0.24
TUBA1C-210ENST00000639419 SNAPC4Q5SXM2 1469 aa16.53■□□□□ 0.24
TUBA1C-210ENST00000639419 PBRM1Q86U86 1689 aa16.49■□□□□ 0.23
TUBA1C-210ENST00000639419 CYB5RLQ6IPT4 315 aa16.47■□□□□ 0.23
TUBA1C-210ENST00000639419 ARAP1Q96P48 1450 aa16.44■□□□□ 0.22
TUBA1C-210ENST00000639419 GRIN2BQ13224 1484 aa16.42■□□□□ 0.22
TUBA1C-210ENST00000639419 CLASP1Q7Z460 1538 aa16.41■□□□□ 0.22
TUBA1C-210ENST00000639419 CHMP7Q8WUX9 453 aaPredicted RBP16.41■□□□□ 0.22
TUBA1C-210ENST00000639419 MAGI1Q96QZ7 1491 aaPredicted RBP16.41■□□□□ 0.22
TUBA1C-210ENST00000639419 ABCA5Q8WWZ7 1642 aa16.4■□□□□ 0.22
TUBA1C-210ENST00000639419 GAPVD1Q14C86 1478 aa16.4■□□□□ 0.22
TUBA1C-210ENST00000639419 SYNJ1O43426 1573 aa16.38■□□□□ 0.21
TUBA1C-210ENST00000639419 SYNJ2O15056 1496 aa16.37■□□□□ 0.21
TUBA1C-210ENST00000639419 ABCA10Q8WWZ4 1543 aa16.37■□□□□ 0.21
TUBA1C-210ENST00000639419 BIVM-ERCC5R4GMW8 1640 aa16.36■□□□□ 0.21
TUBA1C-210ENST00000639419 TOP2BQ02880 1626 aa16.34■□□□□ 0.21
TUBA1C-210ENST00000639419 WRNQ14191 1432 aaPredicted RBP eCLIP16.31■□□□□ 0.26e-8■■□□□ 13.6
TUBA1C-210ENST00000639419 TRHP20396 242 aaPredicted RBP16.28■□□□□ 0.2
TUBA1C-210ENST00000639419 ADAMTS12P58397 1594 aa16.28■□□□□ 0.2
TUBA1C-210ENST00000639419 ERCC6L2Q5T890 1561 aa16.26■□□□□ 0.19
TUBA1C-210ENST00000639419 CEP170Q5SW79 1584 aa16.25■□□□□ 0.19
TUBA1C-210ENST00000639419 GRIN2AQ12879 1464 aa16.24■□□□□ 0.19
TUBA1C-210ENST00000639419 FHAD1B1AJZ9 1412 aa16.16■□□□□ 0.18
TUBA1C-210ENST00000639419 NUP160Q12769 1436 aa16.16■□□□□ 0.18
TUBA1C-210ENST00000639419 ERICH3Q5RHP9 1530 aa16.15■□□□□ 0.18
TUBA1C-210ENST00000639419 SHROOM2Q13796 1616 aa16.13■□□□□ 0.17
TUBA1C-210ENST00000639419 RUSC2Q8N2Y8 1516 aa16.05■□□□□ 0.16
TUBA1C-210ENST00000639419 PRG4Q92954 1404 aaPredicted RBP16.03■□□□□ 0.16
TUBA1C-210ENST00000639419 JPH4Q96JJ6 628 aa16■□□□□ 0.15
TUBA1C-210ENST00000639419 IGF1RP08069 1367 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 1091.2 ms