RNA–Protein interactions for RNA: ENST00000337898.10

PPHLN1-203, Transcript of periphilin 1, humanhuman

TSL 2 BASIC

Gene PPHLN1, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPHLN1-203ENST00000337898 AEBP2Q6ZN18 517 aaPredicted RBP25.41■■□□□ 1.66
PPHLN1-203ENST00000337898 CHIC1Q5VXU3 224 aa24.46■■□□□ 1.51
PPHLN1-203ENST00000337898 NISCHQ9Y2I1 1504 aa21.98■■□□□ 1.11
PPHLN1-203ENST00000337898 SENP3Q9H4L4 574 aaPredicted RBP21.71■■□□□ 1.07
PPHLN1-203ENST00000337898 PHF23Q9BUL5 403 aaPredicted RBP21.47■■□□□ 1.03
PPHLN1-203ENST00000337898 POTEDQ86YR6 584 aa20.46■□□□□ 0.87
PPHLN1-203ENST00000337898 FOXD1Q16676 465 aa20.25■□□□□ 0.83
PPHLN1-203ENST00000337898 PLPPR3Q6T4P5 718 aa19.67■□□□□ 0.74
PPHLN1-203ENST00000337898 MSH5O43196 834 aa19.44■□□□□ 0.7
PPHLN1-203ENST00000337898 CCDC180Q9P1Z9 1646 aa19.29■□□□□ 0.68
PPHLN1-203ENST00000337898 PPP6R1Q9UPN7 881 aa19.04■□□□□ 0.64
PPHLN1-203ENST00000337898 ADRA2BP18089 450 aa18.97■□□□□ 0.63
PPHLN1-203ENST00000337898 PIAS4Q8N2W9 510 aaPredicted RBP18.83■□□□□ 0.6
PPHLN1-203ENST00000337898 ZCCHC6Q5VYS8 1495 aaKnown RBP18.46■□□□□ 0.55
PPHLN1-203ENST00000337898 DCAF8L2P0C7V8 631 aa18.22■□□□□ 0.51
PPHLN1-203ENST00000337898 ABCC9O60706 1549 aa18.22■□□□□ 0.51
PPHLN1-203ENST00000337898 DCAF1Q9Y4B6 1507 aa18.21■□□□□ 0.51
PPHLN1-203ENST00000337898 MYO15BQ96JP2 1530 aa18.04■□□□□ 0.48
PPHLN1-203ENST00000337898 NACADO15069 1562 aa17.97■□□□□ 0.47
PPHLN1-203ENST00000337898 SHROOM4Q9ULL8 1493 aa17.86■□□□□ 0.45
PPHLN1-203ENST00000337898 RB1CC1Q8TDY2 1594 aa17.86■□□□□ 0.45
PPHLN1-203ENST00000337898 SCRIBQ14160 1630 aa17.67■□□□□ 0.42
PPHLN1-203ENST00000337898 UNC13AQ9UPW8 1703 aa17.38■□□□□ 0.37
PPHLN1-203ENST00000337898 SCAF1Q9H7N4 1312 aaKnown RBP17.37■□□□□ 0.37
PPHLN1-203ENST00000337898 MAPK8IP2Q13387 824 aaPredicted RBP17.32■□□□□ 0.36
PPHLN1-203ENST00000337898 PPP4R3CPQ6ZMV5 832 aa17.28■□□□□ 0.36
PPHLN1-203ENST00000337898 DMRT2Q9Y5R5 561 aa17.21■□□□□ 0.35
PPHLN1-203ENST00000337898 SUPT5HO00267 1087 aaKnown RBP17.18■□□□□ 0.34
PPHLN1-203ENST00000337898 CACNB1Q02641 598 aaPredicted RBP17.18■□□□□ 0.34
PPHLN1-203ENST00000337898 BICRAQ9NZM4 1560 aa17.17■□□□□ 0.34
PPHLN1-203ENST00000337898 PABPN1Q86U42 306 aaKnown RBP eCLIP17.12■□□□□ 0.33
PPHLN1-203ENST00000337898 BAZ1AQ9NRL2 1556 aaPredicted RBP17.05■□□□□ 0.32
PPHLN1-203ENST00000337898 CECR2Q9BXF3 1484 aa17.01■□□□□ 0.31
PPHLN1-203ENST00000337898 RSF1Q96T23 1441 aaPredicted RBP16.98■□□□□ 0.31
PPHLN1-203ENST00000337898 SMARCA4P51532 1647 aa16.94■□□□□ 0.3
PPHLN1-203ENST00000337898 MROH2BQ7Z745 1585 aa16.93■□□□□ 0.3
PPHLN1-203ENST00000337898 CNKSR2Q8WXI2 1034 aa16.9■□□□□ 0.3
PPHLN1-203ENST00000337898 WIZO95785 1651 aa16.81■□□□□ 0.28
PPHLN1-203ENST00000337898 SMARCA2P51531 1590 aa16.73■□□□□ 0.27
PPHLN1-203ENST00000337898 EIF4G1Q04637 1599 aaKnown RBP16.73■□□□□ 0.27
PPHLN1-203ENST00000337898 HOXD11P31277 338 aaPredicted RBP16.73■□□□□ 0.27
PPHLN1-203ENST00000337898 PEG3Q9GZU2 1588 aa16.72■□□□□ 0.27
PPHLN1-203ENST00000337898 TOP2AP11388 1531 aaKnown RBP16.71■□□□□ 0.27
PPHLN1-203ENST00000337898 NCBP3Q53F19 620 aaKnown RBP16.7■□□□□ 0.26
PPHLN1-203ENST00000337898 RNF216Q9NWF9 866 aaPredicted RBP16.67■□□□□ 0.26
PPHLN1-203ENST00000337898 ATAD2BQ9ULI0 1458 aa16.65■□□□□ 0.26
PPHLN1-203ENST00000337898 BAZ1BQ9UIG0 1483 aaKnown RBP16.62■□□□□ 0.25
PPHLN1-203ENST00000337898 HMGXB3Q12766 1538 aa16.55■□□□□ 0.24
PPHLN1-203ENST00000337898 NCAPD3P42695 1498 aa16.52■□□□□ 0.24
PPHLN1-203ENST00000337898 CC2D2AQ9P2K1 1620 aa16.5■□□□□ 0.23
PPHLN1-203ENST00000337898 NPM3O75607 178 aaKnown RBP16.49■□□□□ 0.23
PPHLN1-203ENST00000337898 CCDC88BA6NC98 1476 aa16.47■□□□□ 0.23
PPHLN1-203ENST00000337898 KCNA4P22459 653 aa16.45■□□□□ 0.22
PPHLN1-203ENST00000337898 RNF39Q9H2S5 420 aa16.44■□□□□ 0.22
PPHLN1-203ENST00000337898 DCAF8L1A6NGE4 600 aa16.35■□□□□ 0.21
PPHLN1-203ENST00000337898 C1QBPQ07021 282 aaKnown RBP16.22■□□□□ 0.19
PPHLN1-203ENST00000337898 TRIM41Q8WV44 630 aa16.22■□□□□ 0.19
PPHLN1-203ENST00000337898 DNAJC5BQ9UF47 199 aa16.2■□□□□ 0.18
PPHLN1-203ENST00000337898 CFTRP13569 1480 aa16.14■□□□□ 0.17
PPHLN1-203ENST00000337898 PRDM2Q13029 1718 aa16.14■□□□□ 0.17
PPHLN1-203ENST00000337898 CADPSQ9ULU8 1353 aa16.11■□□□□ 0.17
PPHLN1-203ENST00000337898 ABCC8Q09428 1581 aa16.09■□□□□ 0.17
PPHLN1-203ENST00000337898 WRNQ14191 1432 aaPredicted RBP eCLIP16.06■□□□□ 0.16
PPHLN1-203ENST00000337898 LAMC3Q9Y6N6 1575 aa16.05■□□□□ 0.16
PPHLN1-203ENST00000337898 FANCD2Q9BXW9 1451 aa15.95■□□□□ 0.14
PPHLN1-203ENST00000337898 SYNJ1O43426 1573 aa15.94■□□□□ 0.14
PPHLN1-203ENST00000337898 PDS5BQ9NTI5 1447 aa15.94■□□□□ 0.14
PPHLN1-203ENST00000337898 TOP2BQ02880 1626 aa15.94■□□□□ 0.14
PPHLN1-203ENST00000337898 BIVM-ERCC5R4GMW8 1640 aa15.92■□□□□ 0.14
PPHLN1-203ENST00000337898 NESP48681 1621 aa15.92■□□□□ 0.14
PPHLN1-203ENST00000337898 CEP164Q9UPV0 1460 aa15.9■□□□□ 0.14
PPHLN1-203ENST00000337898 EEA1Q15075 1411 aa15.88■□□□□ 0.13
PPHLN1-203ENST00000337898 POTEHQ6S545 545 aa15.87■□□□□ 0.13
PPHLN1-203ENST00000337898 CUX1P39880 1505 aa15.86■□□□□ 0.13
PPHLN1-203ENST00000337898 FAM9AQ8IZU1 332 aaPredicted RBP15.85■□□□□ 0.13
PPHLN1-203ENST00000337898 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.84■□□□□ 0.13
PPHLN1-203ENST00000337898 DNMBPQ6XZF7 1577 aa15.82■□□□□ 0.12
PPHLN1-203ENST00000337898 KIF21AQ7Z4S6 1674 aa15.79■□□□□ 0.12
PPHLN1-203ENST00000337898 SOGA1O94964 1423 aa15.75■□□□□ 0.11
PPHLN1-203ENST00000337898 TOPBP1Q92547 1522 aa15.75■□□□□ 0.11
PPHLN1-203ENST00000337898 ERCC6Q03468 1493 aa15.74■□□□□ 0.11
PPHLN1-203ENST00000337898 FGD5Q6ZNL6 1462 aa15.74■□□□□ 0.11
PPHLN1-203ENST00000337898 MRC2Q9UBG0 1479 aa15.71■□□□□ 0.11
PPHLN1-203ENST00000337898 KIF27Q86VH2 1401 aa15.71■□□□□ 0.11
PPHLN1-203ENST00000337898 CSRNP3Q8WYN3 585 aa15.71■□□□□ 0.1
PPHLN1-203ENST00000337898 URB2Q14146 1524 aaKnown RBP15.7■□□□□ 0.1
PPHLN1-203ENST00000337898 LOC105371045A0A1W2PR82 267 aa15.68■□□□□ 0.1
PPHLN1-203ENST00000337898 SLC4A2P04920 1241 aa15.68■□□□□ 0.1
PPHLN1-203ENST00000337898 POLA1P09884 1462 aaPredicted RBP15.66■□□□□ 0.1
PPHLN1-203ENST00000337898 RUSC2Q8N2Y8 1516 aa15.65■□□□□ 0.1
PPHLN1-203ENST00000337898 CUX2O14529 1486 aa15.65■□□□□ 0.1
PPHLN1-203ENST00000337898 GOLGA3Q08378 1498 aa15.62■□□□□ 0.09
PPHLN1-203ENST00000337898 EHMT2Q96KQ7 1210 aa15.62■□□□□ 0.09
PPHLN1-203ENST00000337898 U3KPZ7 1027 aaPredicted RBP15.62■□□□□ 0.09
PPHLN1-203ENST00000337898 KIF21BO75037 1637 aa15.61■□□□□ 0.09
PPHLN1-203ENST00000337898 WDR62O43379 1518 aa15.6■□□□□ 0.09
PPHLN1-203ENST00000337898 ABCA10Q8WWZ4 1543 aa15.6■□□□□ 0.09
PPHLN1-203ENST00000337898 SLC4A1APQ9BWU0 796 aaKnown RBP15.58■□□□□ 0.08
PPHLN1-203ENST00000337898 RAD54L2Q9Y4B4 1467 aa15.57■□□□□ 0.08
PPHLN1-203ENST00000337898 UBTFP17480 764 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms