RNA–Protein interactions for RNA: ENST00000256678.12

PPHLN1-201, Transcript of periphilin 1, humanhuman

TSL 2 BASIC

Gene PPHLN1, Length 1,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPHLN1-201ENST00000256678 NISCHQ9Y2I1 1504 aa34.11■■■■□ 3.05
PPHLN1-201ENST00000256678 CCDC180Q9P1Z9 1646 aa29.43■■■□□ 2.3
PPHLN1-201ENST00000256678 ZCCHC6Q5VYS8 1495 aaKnown RBP28.73■■■□□ 2.19
PPHLN1-201ENST00000256678 SHROOM4Q9ULL8 1493 aa28.3■■■□□ 2.12
PPHLN1-201ENST00000256678 DCAF8L2P0C7V8 631 aa28.14■■■□□ 2.1
PPHLN1-201ENST00000256678 DCAF1Q9Y4B6 1507 aa28.14■■■□□ 2.09
PPHLN1-201ENST00000256678 MYO15BQ96JP2 1530 aa27.59■■■□□ 2.01
PPHLN1-201ENST00000256678 ABCC9O60706 1549 aa27.51■■□□□ 1.99
PPHLN1-201ENST00000256678 SUPT5HO00267 1087 aaKnown RBP27.5■■□□□ 1.99
PPHLN1-201ENST00000256678 NACADO15069 1562 aa27.32■■□□□ 1.96
PPHLN1-201ENST00000256678 SCRIBQ14160 1630 aa27.24■■□□□ 1.95
PPHLN1-201ENST00000256678 RB1CC1Q8TDY2 1594 aa26.98■■□□□ 1.91
PPHLN1-201ENST00000256678 RSF1Q96T23 1441 aaPredicted RBP26.69■■□□□ 1.86
PPHLN1-201ENST00000256678 CHIC1Q5VXU3 224 aa26.55■■□□□ 1.84
PPHLN1-201ENST00000256678 CECR2Q9BXF3 1484 aa26.52■■□□□ 1.84
PPHLN1-201ENST00000256678 UNC13AQ9UPW8 1703 aa26.5■■□□□ 1.83
PPHLN1-201ENST00000256678 MROH2BQ7Z745 1585 aa26.41■■□□□ 1.82
PPHLN1-201ENST00000256678 BAZ1AQ9NRL2 1556 aaPredicted RBP26.28■■□□□ 1.8
PPHLN1-201ENST00000256678 WIZO95785 1651 aa26.23■■□□□ 1.79
PPHLN1-201ENST00000256678 BICRAQ9NZM4 1560 aa26.2■■□□□ 1.78
PPHLN1-201ENST00000256678 SMARCA4P51532 1647 aa26.11■■□□□ 1.77
PPHLN1-201ENST00000256678 PABPN1Q86U42 306 aaKnown RBP eCLIP26.09■■□□□ 1.77
PPHLN1-201ENST00000256678 TOP2AP11388 1531 aaKnown RBP25.91■■□□□ 1.74
PPHLN1-201ENST00000256678 TRIM41Q8WV44 630 aa25.77■■□□□ 1.72
PPHLN1-201ENST00000256678 PEG3Q9GZU2 1588 aa25.73■■□□□ 1.71
PPHLN1-201ENST00000256678 CCDC88BA6NC98 1476 aa25.71■■□□□ 1.71
PPHLN1-201ENST00000256678 SMARCA2P51531 1590 aa25.7■■□□□ 1.71
PPHLN1-201ENST00000256678 EIF4G1Q04637 1599 aaKnown RBP25.68■■□□□ 1.7
PPHLN1-201ENST00000256678 LOC105371045A0A1W2PR82 267 aa25.61■■□□□ 1.69
PPHLN1-201ENST00000256678 ATAD2BQ9ULI0 1458 aa25.56■■□□□ 1.68
PPHLN1-201ENST00000256678 BAZ1BQ9UIG0 1483 aaKnown RBP25.44■■□□□ 1.66
PPHLN1-201ENST00000256678 FAM9AQ8IZU1 332 aaPredicted RBP25.38■■□□□ 1.65
PPHLN1-201ENST00000256678 ABCC8Q09428 1581 aa25.35■■□□□ 1.65
PPHLN1-201ENST00000256678 NCAPD3P42695 1498 aa25.24■■□□□ 1.63
PPHLN1-201ENST00000256678 HMGXB3Q12766 1538 aa25.22■■□□□ 1.63
PPHLN1-201ENST00000256678 WRNQ14191 1432 aaPredicted RBP eCLIP25.09■■□□□ 1.61
PPHLN1-201ENST00000256678 EHMT2Q96KQ7 1210 aa25.05■■□□□ 1.6
PPHLN1-201ENST00000256678 SOGA1O94964 1423 aa24.99■■□□□ 1.59
PPHLN1-201ENST00000256678 SYNJ1O43426 1573 aa24.98■■□□□ 1.59
PPHLN1-201ENST00000256678 PCGF6Q9BYE7 350 aa24.97■■□□□ 1.59
PPHLN1-201ENST00000256678 EEA1Q15075 1411 aa24.96■■□□□ 1.59
PPHLN1-201ENST00000256678 RUSC2Q8N2Y8 1516 aa24.88■■□□□ 1.57
PPHLN1-201ENST00000256678 CC2D2AQ9P2K1 1620 aa24.86■■□□□ 1.57
PPHLN1-201ENST00000256678 CSRNP3Q8WYN3 585 aa24.85■■□□□ 1.57
PPHLN1-201ENST00000256678 CFTRP13569 1480 aa24.83■■□□□ 1.56
PPHLN1-201ENST00000256678 TOP2BQ02880 1626 aa24.81■■□□□ 1.56
PPHLN1-201ENST00000256678 TRIM26Q12899 539 aaPredicted RBP24.79■■□□□ 1.56
PPHLN1-201ENST00000256678 BIVM-ERCC5R4GMW8 1640 aa24.76■■□□□ 1.55
PPHLN1-201ENST00000256678 TNIKQ9UKE5 1360 aa24.71■■□□□ 1.55
PPHLN1-201ENST00000256678 PRDM2Q13029 1718 aa24.69■■□□□ 1.54
PPHLN1-201ENST00000256678 GOLGA3Q08378 1498 aa24.67■■□□□ 1.54
PPHLN1-201ENST00000256678 CADPSQ9ULU8 1353 aa24.65■■□□□ 1.54
PPHLN1-201ENST00000256678 CUX1P39880 1505 aa24.64■■□□□ 1.54
PPHLN1-201ENST00000256678 HRCP23327 699 aa24.63■■□□□ 1.53
PPHLN1-201ENST00000256678 CEP162Q5TB80 1403 aa24.62■■□□□ 1.53
PPHLN1-201ENST00000256678 KIF21BO75037 1637 aa24.62■■□□□ 1.53
PPHLN1-201ENST00000256678 CEP164Q9UPV0 1460 aa24.62■■□□□ 1.53
PPHLN1-201ENST00000256678 UBTFP17480 764 aaKnown RBP24.61■■□□□ 1.53
PPHLN1-201ENST00000256678 RAPGEF2Q9Y4G8 1499 aa24.44■■□□□ 1.5
PPHLN1-201ENST00000256678 KIF27Q86VH2 1401 aa24.4■■□□□ 1.5
PPHLN1-201ENST00000256678 PPARGC1BQ86YN6 1023 aaKnown RBP24.4■■□□□ 1.5
PPHLN1-201ENST00000256678 FANCD2Q9BXW9 1451 aa24.39■■□□□ 1.49
PPHLN1-201ENST00000256678 PRXQ9BXM0 1461 aa24.37■■□□□ 1.49
PPHLN1-201ENST00000256678 ERICH3Q5RHP9 1530 aa24.35■■□□□ 1.49
PPHLN1-201ENST00000256678 NESP48681 1621 aa24.32■■□□□ 1.48
PPHLN1-201ENST00000256678 CLIP1P30622 1438 aa24.32■■□□□ 1.48
PPHLN1-201ENST00000256678 FGD5Q6ZNL6 1462 aa24.29■■□□□ 1.48
PPHLN1-201ENST00000256678 LAMC3Q9Y6N6 1575 aa24.28■■□□□ 1.48
PPHLN1-201ENST00000256678 CUX2O14529 1486 aa24.25■■□□□ 1.47
PPHLN1-201ENST00000256678 DNMBPQ6XZF7 1577 aa24.23■■□□□ 1.47
PPHLN1-201ENST00000256678 DNAJC5BQ9UF47 199 aa24.19■■□□□ 1.46
PPHLN1-201ENST00000256678 TOPBP1Q92547 1522 aa24.18■■□□□ 1.46
PPHLN1-201ENST00000256678 IGF1RP08069 1367 aa24.16■■□□□ 1.46
PPHLN1-201ENST00000256678 VPS8Q8N3P4 1428 aa24.16■■□□□ 1.46
PPHLN1-201ENST00000256678 RANGAP1P46060 587 aaPredicted RBP24.12■■□□□ 1.45
PPHLN1-201ENST00000256678 POLA1P09884 1462 aaPredicted RBP24.1■■□□□ 1.45
PPHLN1-201ENST00000256678 PDS5BQ9NTI5 1447 aa24.1■■□□□ 1.45
PPHLN1-201ENST00000256678 TTBK1Q5TCY1 1321 aaPredicted RBP24.09■■□□□ 1.45
PPHLN1-201ENST00000256678 RAD54L2Q9Y4B4 1467 aa24.07■■□□□ 1.44
PPHLN1-201ENST00000256678 ABCA10Q8WWZ4 1543 aa24.06■■□□□ 1.44
PPHLN1-201ENST00000256678 URB2Q14146 1524 aaKnown RBP24.06■■□□□ 1.44
PPHLN1-201ENST00000256678 CARMIL1Q5VZK9 1371 aa24.05■■□□□ 1.44
PPHLN1-201ENST00000256678 ZEB1P37275 1124 aaPredicted RBP24.03■■□□□ 1.44
PPHLN1-201ENST00000256678 ARAP1Q96P48 1450 aa24.01■■□□□ 1.43
PPHLN1-201ENST00000256678 KIF21AQ7Z4S6 1674 aa23.99■■□□□ 1.43
PPHLN1-201ENST00000256678 APLP2Q06481 763 aa23.97■■□□□ 1.43
PPHLN1-201ENST00000256678 WDR97A6NE52 1622 aa23.93■■□□□ 1.42
PPHLN1-201ENST00000256678 ARHGAP35Q9NRY4 1499 aa23.91■■□□□ 1.42
PPHLN1-201ENST00000256678 CUL7Q14999 1698 aa23.87■■□□□ 1.41
PPHLN1-201ENST00000256678 ABCA5Q8WWZ7 1642 aa23.82■■□□□ 1.4
PPHLN1-201ENST00000256678 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.8■■□□□ 1.4
PPHLN1-201ENST00000256678 TDRD9Q8NDG6 1382 aaKnown RBP23.79■■□□□ 1.4
PPHLN1-201ENST00000256678 GAPVD1Q14C86 1478 aa23.78■■□□□ 1.4
PPHLN1-201ENST00000256678 TARBP1Q13395 1621 aaKnown RBP23.77■■□□□ 1.4
PPHLN1-201ENST00000256678 MRC2Q9UBG0 1479 aa23.76■■□□□ 1.39
PPHLN1-201ENST00000256678 CCER1Q8TC90 406 aaPredicted RBP23.75■■□□□ 1.39
PPHLN1-201ENST00000256678 KANK4Q5T7N3 995 aaPredicted RBP23.7■■□□□ 1.39
PPHLN1-201ENST00000256678 CTTNBP2Q8WZ74 1663 aa23.7■■□□□ 1.38
PPHLN1-201ENST00000256678 EFCAB5A4FU69 1503 aa23.63■■□□□ 1.37
PPHLN1-201ENST00000256678 HNRNPUL2Q1KMD3 747 aaKnown RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms